Wall clock time and date at job start Mon Mar 8 2021 12:34:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86301 * 1 3 3 C 1.86297 * 109.47358 * 2 1 4 4 C 1.86302 * 109.47126 * 240.00016 * 2 1 3 5 5 C 1.86306 * 109.47233 * 119.99991 * 2 1 3 6 6 O 1.42899 * 109.46863 * 66.58403 * 5 2 1 7 7 C 1.35903 * 116.99921 * 282.07351 * 6 5 2 8 8 C 1.38664 * 120.04398 * 353.85979 * 7 6 5 9 9 C 1.38383 * 119.91960 * 179.97438 * 8 7 6 10 10 F 1.35104 * 119.99745 * 179.97438 * 9 8 7 11 11 C 1.38473 * 120.00799 * 0.02770 * 9 8 7 12 12 C 1.38259 * 120.08289 * 359.69393 * 11 9 8 13 13 C 1.38134 * 120.07889 * 0.55735 * 12 11 9 14 14 C 1.50696 * 120.00326 * 179.74388 * 13 12 11 15 15 O 1.42891 * 109.47123 * 254.72439 * 14 13 12 16 16 Si 1.86296 * 109.46850 * 14.72650 * 14 13 12 17 17 H 1.48500 * 109.47363 * 60.00125 * 16 14 13 18 18 H 1.48508 * 109.46868 * 179.97438 * 16 14 13 19 19 H 1.48494 * 109.47282 * 299.99648 * 16 14 13 20 20 H 1.09000 * 109.46749 * 295.55364 * 1 2 3 21 21 H 1.08992 * 109.46740 * 55.54890 * 1 2 3 22 22 H 1.09000 * 109.47182 * 175.55476 * 1 2 3 23 23 H 1.09003 * 109.47368 * 179.97438 * 3 2 1 24 24 H 1.08998 * 109.47434 * 300.00342 * 3 2 1 25 25 H 1.09004 * 109.47113 * 59.99843 * 3 2 1 26 26 H 1.09001 * 109.47002 * 305.00112 * 4 2 1 27 27 H 1.08993 * 109.46984 * 65.00111 * 4 2 1 28 28 H 1.08999 * 109.47124 * 185.00412 * 4 2 1 29 29 H 1.08998 * 109.47106 * 306.58680 * 5 2 1 30 30 H 1.08998 * 109.47102 * 186.58226 * 5 2 1 31 31 H 1.08000 * 120.04189 * 359.95445 * 8 7 6 32 32 H 1.08002 * 119.95786 * 180.02562 * 11 9 8 33 33 H 1.07999 * 119.96117 * 180.30205 * 12 11 9 34 34 H 1.09007 * 109.46646 * 134.72249 * 14 13 12 35 35 H 0.96711 * 114.00028 * 179.97438 * 15 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4841 1.7564 0.0000 4 6 2.4840 -0.8782 -1.5212 5 6 2.4841 -0.8782 1.5212 6 8 2.1380 -2.2627 1.4464 7 6 0.8529 -2.5941 1.7391 8 6 -0.0223 -1.6287 2.2132 9 6 -1.3304 -1.9689 2.5099 10 9 -2.1843 -1.0296 2.9723 11 6 -1.7640 -3.2721 2.3339 12 6 -0.8931 -4.2337 1.8559 13 6 0.4148 -3.8991 1.5635 14 6 1.3642 -4.9498 1.0480 15 8 2.2690 -5.3257 2.0880 16 14 0.3971 -6.4435 0.4962 17 1 -0.5432 -6.0528 -0.5847 18 1 1.3326 -7.4786 -0.0124 19 1 -0.3688 -6.9894 1.6452 20 1 -0.3633 0.4433 0.9272 21 1 -0.3632 0.5813 -0.8474 22 1 -0.3633 -1.0246 -0.0797 23 1 3.5741 1.7564 0.0005 24 1 2.1207 2.2703 -0.8899 25 1 2.1207 2.2703 0.8900 26 1 2.0494 -1.8768 -1.5671 27 1 2.1957 -0.3153 -2.4088 28 1 3.5703 -0.9565 -1.4775 29 1 2.0277 -0.4370 2.4072 30 1 3.5677 -0.7773 1.5820 31 1 0.3166 -0.6125 2.3509 32 1 -2.7852 -3.5367 2.5654 33 1 -1.2347 -5.2485 1.7148 34 1 1.9264 -4.5490 0.2044 35 1 2.9104 -6.0007 1.8265 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_10564890_3095236.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:34:31 Heat of formation + Delta-G solvation = -118.907381 kcal Electronic energy + Delta-G solvation = -18128.831134 eV Core-core repulsion = 15165.850462 eV Total energy + Delta-G solvation = -2962.980671 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 258.100 amu Computer time = 14.25 seconds Orbital eigenvalues (eV) -49.85360 -41.36547 -38.50950 -37.38230 -32.67538 -31.41561 -29.81478 -28.54635 -28.47360 -27.85691 -26.39685 -23.52354 -22.50529 -19.50858 -18.46611 -18.11182 -17.00599 -16.93815 -16.73571 -16.27319 -16.10383 -15.53422 -15.33972 -14.69194 -14.30653 -14.16501 -13.99308 -13.85486 -13.78693 -13.72440 -13.41027 -13.30134 -13.19060 -12.93888 -12.61716 -12.48182 -12.14660 -11.97361 -11.71761 -11.03120 -10.93710 -10.80242 -10.25275 -9.83171 -9.08385 0.02298 0.25621 1.13927 1.37813 1.42219 1.47971 1.58777 1.66437 1.88579 2.33774 2.39173 2.47984 3.20691 3.46589 3.68346 3.87002 3.95659 4.06433 4.21832 4.27286 4.52624 4.56938 4.59083 4.59529 4.67402 4.69463 4.70563 4.73861 4.91518 5.01434 5.14863 5.24671 5.34886 5.45972 5.49261 5.65082 6.29135 6.66675 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.451 4.451 2 Si 0.986 3.014 3 C -0.447 4.447 4 C -0.441 4.441 5 C -0.250 4.250 6 O -0.274 6.274 7 C 0.179 3.821 8 C -0.245 4.245 9 C 0.145 3.855 10 F -0.134 7.134 11 C -0.187 4.187 12 C -0.058 4.058 13 C -0.122 4.122 14 C -0.069 4.069 15 O -0.541 6.541 16 Si 0.939 3.061 17 H -0.246 1.246 18 H -0.254 1.254 19 H -0.247 1.247 20 H 0.071 0.929 21 H 0.072 0.928 22 H 0.073 0.927 23 H 0.072 0.928 24 H 0.075 0.925 25 H 0.071 0.929 26 H 0.072 0.928 27 H 0.071 0.929 28 H 0.071 0.929 29 H 0.073 0.927 30 H 0.112 0.888 31 H 0.149 0.851 32 H 0.141 0.859 33 H 0.139 0.861 34 H 0.078 0.922 35 H 0.378 0.622 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.297 0.066 -2.316 2.655 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.558 4.558 2 Si 1.182 2.818 3 C -0.555 4.555 4 C -0.550 4.550 5 C -0.370 4.370 6 O -0.186 6.186 7 C 0.132 3.868 8 C -0.264 4.264 9 C 0.125 3.875 10 F -0.112 7.112 11 C -0.206 4.206 12 C -0.076 4.076 13 C -0.123 4.123 14 C -0.179 4.179 15 O -0.346 6.346 16 Si 0.761 3.239 17 H -0.170 1.170 18 H -0.178 1.178 19 H -0.170 1.170 20 H 0.090 0.910 21 H 0.091 0.909 22 H 0.092 0.908 23 H 0.091 0.909 24 H 0.094 0.906 25 H 0.090 0.910 26 H 0.091 0.909 27 H 0.090 0.910 28 H 0.090 0.910 29 H 0.092 0.908 30 H 0.130 0.870 31 H 0.167 0.833 32 H 0.159 0.841 33 H 0.156 0.844 34 H 0.096 0.904 35 H 0.225 0.775 Dipole moment (debyes) X Y Z Total from point charges 0.634 -0.313 -2.255 2.363 hybrid contribution 0.366 0.456 0.166 0.608 sum 1.001 0.143 -2.088 2.320 Atomic orbital electron populations 1.26463 1.19683 1.04962 1.04731 0.79895 0.68082 0.66960 0.66822 1.26051 1.06484 1.18059 1.04950 1.25982 1.06374 1.08176 1.14450 1.28272 1.07122 0.85881 1.15759 1.86123 1.23552 1.26177 1.82740 1.18440 0.83822 0.92242 0.92313 1.21284 0.93660 1.01676 1.09831 1.17365 0.87181 0.86213 0.96719 1.91534 1.69586 1.64171 1.85916 1.20974 1.01856 0.91503 1.06276 1.20761 0.91801 0.99481 0.95514 1.18627 0.94181 0.91919 1.07572 1.24522 0.96097 1.03441 0.93867 1.86539 1.48381 1.62371 1.37335 0.85897 0.80243 0.77257 0.80470 1.16962 1.17766 1.17029 0.90997 0.90854 0.90773 0.90917 0.90622 0.91008 0.90885 0.91002 0.90996 0.90843 0.87016 0.83337 0.84089 0.84380 0.90442 0.77495 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.49 7.04 101.05 0.71 1.20 16 2 Si 0.99 -2.55 11.68 -169.99 -1.99 -4.54 16 3 C -0.45 1.02 8.65 101.05 0.87 1.89 16 4 C -0.44 0.64 8.65 101.05 0.87 1.52 16 5 C -0.25 0.29 5.31 101.05 0.54 0.83 16 6 O -0.27 -0.44 9.12 -19.43 -0.18 -0.61 16 7 C 0.18 0.37 5.77 -39.23 -0.23 0.14 16 8 C -0.25 -0.36 5.62 -39.37 -0.22 -0.58 16 9 C 0.14 0.31 7.30 -39.44 -0.29 0.02 16 10 F -0.13 -0.39 17.27 2.25 0.04 -0.35 16 11 C -0.19 -0.23 10.02 -39.49 -0.40 -0.63 16 12 C -0.06 -0.07 8.65 -39.61 -0.34 -0.41 16 13 C -0.12 -0.24 5.31 -104.46 -0.55 -0.79 16 14 C -0.07 -0.03 2.37 36.00 0.09 0.06 16 15 O -0.54 -0.62 12.86 -35.23 -0.45 -1.07 16 16 Si 0.94 -0.54 25.48 -169.99 -4.33 -4.87 16 17 H -0.25 0.05 7.11 56.52 0.40 0.45 16 18 H -0.25 0.11 7.11 56.52 0.40 0.51 16 19 H -0.25 -0.06 6.74 56.52 0.38 0.32 16 20 H 0.07 -0.07 6.50 -51.93 -0.34 -0.41 16 21 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 22 H 0.07 -0.01 6.55 -51.93 -0.34 -0.35 16 23 H 0.07 -0.18 7.96 -51.93 -0.41 -0.59 16 24 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 25 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 26 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 27 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 28 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 29 H 0.07 -0.13 6.06 -51.93 -0.31 -0.44 16 30 H 0.11 -0.26 7.96 -51.93 -0.41 -0.68 16 31 H 0.15 -0.05 4.24 -52.49 -0.22 -0.27 16 32 H 0.14 -0.09 8.06 -52.49 -0.42 -0.51 16 33 H 0.14 -0.08 4.88 -52.49 -0.26 -0.33 16 34 H 0.08 -0.06 7.83 -51.93 -0.41 -0.47 16 35 H 0.38 -1.24 8.74 45.56 0.40 -0.84 16 LS Contribution 288.60 15.07 4.35 4.35 Total: 0.00 -5.14 288.60 -5.53 -10.67 By element: Atomic # 1 Polarization: -2.78 SS G_CDS: -4.03 Total: -6.81 kcal Atomic # 6 Polarization: 2.19 SS G_CDS: 1.05 Total: 3.25 kcal Atomic # 8 Polarization: -1.06 SS G_CDS: -0.63 Total: -1.69 kcal Atomic # 9 Polarization: -0.39 SS G_CDS: 0.04 Total: -0.35 kcal Atomic # 14 Polarization: -3.10 SS G_CDS: -6.32 Total: -9.41 kcal Total LS contribution 4.35 Total: 4.35 kcal Total: -5.14 -5.53 -10.67 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_10564890_3095236.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -108.236 kcal (2) G-P(sol) polarization free energy of solvation -5.139 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.375 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.532 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -10.671 kcal (6) G-S(sol) free energy of system = (1) + (5) -118.907 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 14.25 seconds