Wall clock time and date at job start Mon Mar 8 2021 12:58:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.38125 * 119.97569 * 2 1 4 4 C 1.38742 * 119.95425 * 180.02562 * 3 2 1 5 5 O 1.35922 * 120.04297 * 179.97438 * 4 3 2 6 6 C 1.42899 * 117.00145 * 0.02562 * 5 4 3 7 7 C 1.52999 * 109.47422 * 179.97438 * 6 5 4 8 8 O 1.42903 * 109.46695 * 64.99968 * 7 6 5 9 9 Si 1.63105 * 113.99693 * 180.02562 * 8 7 6 10 10 C 1.86297 * 109.46893 * 299.99852 * 9 8 7 11 11 C 1.86297 * 109.47196 * 59.99863 * 9 8 7 12 12 C 1.86298 * 109.46893 * 179.97438 * 9 8 7 13 13 C 1.53004 * 109.47203 * 59.99959 * 12 9 8 14 14 C 1.53005 * 109.47066 * 179.97438 * 12 9 8 15 15 C 1.53000 * 109.47302 * 299.99706 * 12 9 8 16 16 C 1.38710 * 119.91607 * 359.97438 * 4 3 2 17 17 C 1.50704 * 120.01951 * 179.97438 * 16 4 3 18 18 O 1.42903 * 109.46681 * 285.03996 * 17 16 4 19 19 Si 1.86300 * 109.46665 * 165.04354 * 17 16 4 20 20 H 1.48498 * 109.47300 * 59.99783 * 19 17 16 21 21 H 1.48502 * 109.46888 * 179.97438 * 19 17 16 22 22 H 1.48499 * 109.47324 * 299.99560 * 19 17 16 23 23 C 1.38160 * 119.95545 * 0.02562 * 16 4 3 24 24 C 1.38342 * 120.04379 * 359.95403 * 23 16 4 25 25 Cl 1.73605 * 119.95963 * 180.02562 * 24 23 16 26 26 H 1.08998 * 109.47585 * 89.99833 * 1 2 3 27 27 H 1.08996 * 109.46924 * 210.00181 * 1 2 3 28 28 H 1.09002 * 109.47011 * 329.99656 * 1 2 3 29 29 H 1.07997 * 120.02584 * 359.74531 * 3 2 1 30 30 H 1.09004 * 109.46513 * 300.00163 * 6 5 4 31 31 H 1.09001 * 109.47158 * 59.99769 * 6 5 4 32 32 H 1.08996 * 109.47249 * 184.99930 * 7 6 5 33 33 H 1.08997 * 109.46934 * 305.00435 * 7 6 5 34 34 H 1.08997 * 109.47133 * 60.00218 * 10 9 8 35 35 H 1.09007 * 109.47118 * 179.97438 * 10 9 8 36 36 H 1.08997 * 109.47456 * 299.99995 * 10 9 8 37 37 H 1.09002 * 109.46899 * 60.00073 * 11 9 8 38 38 H 1.08998 * 109.47464 * 179.97438 * 11 9 8 39 39 H 1.08997 * 109.47248 * 300.00039 * 11 9 8 40 40 H 1.09002 * 109.46904 * 59.99786 * 13 12 9 41 41 H 1.08999 * 109.47004 * 179.97438 * 13 12 9 42 42 H 1.08997 * 109.47191 * 299.99683 * 13 12 9 43 43 H 1.09005 * 109.46606 * 59.99916 * 14 12 9 44 44 H 1.08997 * 109.47227 * 180.02562 * 14 12 9 45 45 H 1.09002 * 109.47248 * 300.00341 * 14 12 9 46 46 H 1.08998 * 109.46533 * 60.00402 * 15 12 9 47 47 H 1.09006 * 109.47009 * 179.97438 * 15 12 9 48 48 H 1.08997 * 109.47440 * 300.00308 * 15 12 9 49 49 H 1.08996 * 109.47425 * 45.04329 * 17 16 4 50 50 H 0.96697 * 113.99495 * 179.97438 * 18 17 16 51 51 H 1.08000 * 119.98023 * 179.97438 * 23 16 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1971 1.1965 0.0000 4 6 3.5845 1.1960 -0.0005 5 8 4.2655 2.3723 -0.0011 6 6 3.4886 3.5717 -0.0005 7 6 4.4219 4.7840 -0.0005 8 8 5.1631 4.8143 -1.2219 9 14 6.1986 6.0691 -1.3385 10 6 5.2500 7.6689 -1.2313 11 6 7.4347 5.9856 0.0528 12 6 7.0942 5.9856 -2.9699 13 6 6.0794 6.0538 -4.1130 14 6 8.0651 7.1631 -3.0796 15 6 7.8733 4.6717 -3.0574 16 6 4.2759 -0.0066 -0.0005 17 6 5.7829 -0.0098 -0.0017 18 8 6.2589 0.3382 -1.3034 19 14 6.4004 -1.7080 0.4519 20 1 5.9024 -2.6966 -0.5380 21 1 7.8855 -1.7115 0.4502 22 1 5.9057 -2.0697 1.8046 23 6 3.5820 -1.2013 -0.0005 24 6 2.1985 -1.1987 0.0004 25 17 1.3288 -2.7012 0.0011 26 1 -0.3634 0.0000 -1.0276 27 1 -0.3633 -0.8899 0.5138 28 1 -0.3633 0.8900 0.5139 29 1 1.6572 2.1318 -0.0042 30 1 2.8591 3.5971 -0.8900 31 1 2.8604 3.5972 0.8900 32 1 3.8324 5.6964 0.0895 33 1 5.1110 4.7120 0.8409 34 1 4.7263 7.7175 -0.2766 35 1 5.9420 8.5076 -1.3087 36 1 4.5268 7.7178 -2.0453 37 1 7.9896 5.0495 -0.0100 38 1 8.1269 6.8239 -0.0253 39 1 6.9110 6.0342 1.0075 40 1 5.5244 6.9899 -4.0506 41 1 6.6035 6.0054 -5.0675 42 1 5.3875 5.2153 -4.0351 43 1 8.7881 7.1148 -2.2653 44 1 8.5888 7.1145 -4.0343 45 1 7.5098 8.0989 -3.0174 46 1 7.1813 3.8332 -2.9795 47 1 8.3970 4.6227 -4.0122 48 1 8.5963 4.6231 -2.2431 49 1 6.1484 0.7158 0.7249 50 1 7.2229 0.3562 -1.3778 51 1 4.1198 -2.1378 -0.0010 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_12058104_10264010.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:58:54 Heat of formation + Delta-G solvation = -158.339068 kcal Electronic energy + Delta-G solvation = -29128.839797 eV Core-core repulsion = 25177.433136 eV Total energy + Delta-G solvation = -3951.406661 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 360.148 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -41.47295 -39.22307 -37.88133 -37.59806 -36.95078 -36.81669 -34.16301 -31.50881 -30.26300 -29.43855 -29.27457 -29.10205 -27.85496 -27.37682 -25.22935 -24.82608 -22.82897 -22.03277 -20.40968 -18.85188 -18.41863 -18.08869 -17.76569 -17.27200 -16.50824 -16.27910 -15.87966 -15.83641 -15.37724 -15.27573 -14.97880 -14.88920 -14.84533 -14.69755 -14.46676 -14.19067 -13.95383 -13.63321 -13.49473 -13.43265 -13.42530 -13.27029 -13.16661 -12.94396 -12.91070 -12.90356 -12.69959 -12.68261 -12.39345 -12.19366 -12.08011 -11.90223 -11.74875 -11.69669 -11.60413 -11.50927 -11.45234 -11.29873 -10.39688 -10.20142 -10.06951 -9.90472 -9.02582 0.09131 0.23159 1.17094 1.25666 1.41853 1.45523 1.51732 1.72442 1.92798 2.03083 2.12917 2.40398 2.46656 3.42059 3.63383 3.70630 3.85579 3.95239 3.97316 4.07272 4.10610 4.13512 4.14363 4.20642 4.33013 4.47618 4.49197 4.49483 4.55172 4.62753 4.65154 4.67352 4.68788 4.69836 4.72398 4.81436 4.87703 5.01665 5.01840 5.06129 5.12060 5.13419 5.14953 5.18165 5.32684 5.32921 5.35084 5.42521 5.50811 5.52519 5.55014 5.58939 6.35694 6.72144 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 C -0.026 4.026 3 C -0.204 4.204 4 C 0.171 3.829 5 O -0.287 6.287 6 C 0.053 3.947 7 C 0.088 3.912 8 O -0.615 6.615 9 Si 1.287 2.713 10 C -0.513 4.513 11 C -0.510 4.510 12 C -0.374 4.374 13 C -0.134 4.134 14 C -0.137 4.137 15 C -0.134 4.134 16 C -0.105 4.105 17 C -0.065 4.065 18 O -0.537 6.537 19 Si 0.933 3.067 20 H -0.245 1.245 21 H -0.252 1.252 22 H -0.246 1.246 23 C -0.070 4.070 24 C -0.074 4.074 25 Cl -0.065 7.065 26 H 0.080 0.920 27 H 0.078 0.922 28 H 0.073 0.927 29 H 0.140 0.860 30 H 0.076 0.924 31 H 0.076 0.924 32 H 0.078 0.922 33 H 0.067 0.933 34 H 0.065 0.935 35 H 0.074 0.926 36 H 0.072 0.928 37 H 0.073 0.927 38 H 0.073 0.927 39 H 0.065 0.935 40 H 0.053 0.947 41 H 0.053 0.947 42 H 0.060 0.940 43 H 0.055 0.945 44 H 0.056 0.944 45 H 0.055 0.945 46 H 0.063 0.937 47 H 0.052 0.948 48 H 0.053 0.947 49 H 0.078 0.922 50 H 0.377 0.623 51 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.220 3.293 2.207 3.971 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C -0.027 4.027 3 C -0.222 4.222 4 C 0.124 3.876 5 O -0.200 6.200 6 C -0.022 4.022 7 C 0.012 3.988 8 O -0.575 6.575 9 Si 1.418 2.582 10 C -0.614 4.614 11 C -0.612 4.612 12 C -0.417 4.417 13 C -0.191 4.191 14 C -0.194 4.194 15 C -0.191 4.191 16 C -0.106 4.106 17 C -0.175 4.175 18 O -0.342 6.342 19 Si 0.755 3.245 20 H -0.169 1.169 21 H -0.176 1.176 22 H -0.169 1.169 23 C -0.089 4.089 24 C -0.101 4.101 25 Cl -0.036 7.036 26 H 0.099 0.901 27 H 0.097 0.903 28 H 0.092 0.908 29 H 0.158 0.842 30 H 0.094 0.906 31 H 0.094 0.906 32 H 0.095 0.905 33 H 0.085 0.915 34 H 0.084 0.916 35 H 0.093 0.907 36 H 0.091 0.909 37 H 0.092 0.908 38 H 0.092 0.908 39 H 0.084 0.916 40 H 0.072 0.928 41 H 0.072 0.928 42 H 0.079 0.921 43 H 0.074 0.926 44 H 0.075 0.925 45 H 0.074 0.926 46 H 0.082 0.918 47 H 0.071 0.929 48 H 0.072 0.928 49 H 0.096 0.904 50 H 0.224 0.776 51 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -0.532 2.185 2.176 3.129 hybrid contribution 0.436 0.839 0.036 0.946 sum -0.097 3.024 2.213 3.749 Atomic orbital electron populations 1.20943 0.89784 1.03853 1.03418 1.19580 0.96823 0.90652 0.95651 1.21095 0.92651 0.98669 1.09829 1.18738 0.89908 0.85927 0.93016 1.86210 1.34848 1.11570 1.87343 1.23079 0.94147 0.82690 1.02310 1.22057 0.94631 0.96077 0.86027 1.85428 1.62972 1.68688 1.40368 0.76723 0.60302 0.55887 0.65247 1.27061 1.09826 1.20202 1.04356 1.27025 1.13930 1.04888 1.15365 1.25768 1.03044 0.98130 1.14771 1.21510 0.98273 1.01622 0.97701 1.21562 0.98701 0.96944 1.02185 1.21505 0.99799 0.96124 1.01653 1.18427 0.94160 0.90095 1.07910 1.24456 0.93086 1.10585 0.89421 1.86554 1.26322 1.92928 1.28398 0.85990 0.80498 0.76775 0.81245 1.16908 1.17609 1.16948 1.20774 0.92450 0.97759 0.97894 1.20481 0.91807 0.87135 1.10648 1.98366 1.76467 1.31645 1.97116 0.90096 0.90349 0.90818 0.84225 0.90552 0.90587 0.90467 0.91465 0.91554 0.90668 0.90855 0.90753 0.90805 0.91568 0.92819 0.92821 0.92114 0.92550 0.92522 0.92605 0.91782 0.92925 0.92797 0.90420 0.77568 0.84377 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.07 9.61 36.01 0.35 0.42 16 2 C -0.03 -0.04 5.88 -104.61 -0.62 -0.65 16 3 C -0.20 -0.20 8.69 -39.44 -0.34 -0.54 16 4 C 0.17 0.40 6.66 -39.22 -0.26 0.14 16 5 O -0.29 -0.56 9.43 -24.35 -0.23 -0.79 16 6 C 0.05 -0.06 5.12 37.16 0.19 0.13 16 7 C 0.09 -0.15 5.51 37.16 0.20 0.06 16 8 O -0.62 -0.13 8.52 -40.09 -0.34 -0.47 16 9 Si 1.29 -1.67 8.45 -169.99 -1.44 -3.11 16 10 C -0.51 0.67 8.50 101.05 0.86 1.53 16 11 C -0.51 0.48 8.50 101.05 0.86 1.34 16 12 C -0.37 0.09 0.53 -90.62 -0.05 0.04 16 13 C -0.13 -0.03 7.85 37.16 0.29 0.26 16 14 C -0.14 0.09 7.85 37.16 0.29 0.38 16 15 C -0.13 -0.04 7.85 37.16 0.29 0.25 16 16 C -0.10 -0.28 5.30 -104.47 -0.55 -0.84 16 17 C -0.06 -0.07 2.37 36.01 0.09 0.01 16 18 O -0.54 -0.92 12.86 -35.23 -0.45 -1.38 16 19 Si 0.93 0.38 25.49 -169.99 -4.33 -3.95 16 20 H -0.25 -0.36 6.73 56.52 0.38 0.03 16 21 H -0.25 -0.06 7.11 56.52 0.40 0.34 16 22 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 23 C -0.07 -0.18 8.44 -39.57 -0.33 -0.52 16 24 C -0.07 -0.19 6.31 -39.49 -0.25 -0.44 16 25 Cl -0.06 -0.14 27.29 -51.86 -1.41 -1.56 16 26 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 27 H 0.08 -0.03 6.90 -51.93 -0.36 -0.39 16 28 H 0.07 -0.15 8.08 -51.93 -0.42 -0.57 16 29 H 0.14 -0.21 6.30 -52.49 -0.33 -0.54 16 30 H 0.08 -0.10 7.66 -51.93 -0.40 -0.50 16 31 H 0.08 -0.26 7.67 -51.93 -0.40 -0.66 16 32 H 0.08 -0.32 7.21 -51.93 -0.37 -0.69 16 33 H 0.07 -0.17 7.21 -51.93 -0.37 -0.55 16 34 H 0.07 -0.13 7.48 -51.93 -0.39 -0.52 16 35 H 0.07 -0.10 7.79 -51.93 -0.40 -0.51 16 36 H 0.07 -0.07 7.79 -51.93 -0.40 -0.48 16 37 H 0.07 -0.03 7.79 -51.93 -0.40 -0.44 16 38 H 0.07 -0.09 7.79 -51.93 -0.40 -0.49 16 39 H 0.07 -0.09 7.48 -51.93 -0.39 -0.48 16 40 H 0.05 -0.03 7.80 -51.93 -0.40 -0.43 16 41 H 0.05 0.03 8.14 -51.93 -0.42 -0.39 16 42 H 0.06 0.05 7.96 -51.93 -0.41 -0.37 16 43 H 0.06 -0.07 7.79 -51.93 -0.40 -0.48 16 44 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 45 H 0.05 -0.07 7.79 -51.93 -0.40 -0.48 16 46 H 0.06 0.07 7.96 -51.93 -0.41 -0.35 16 47 H 0.05 0.03 8.14 -51.93 -0.42 -0.39 16 48 H 0.05 -0.02 7.79 -51.93 -0.40 -0.43 16 49 H 0.08 0.00 7.83 -51.93 -0.41 -0.41 16 50 H 0.38 -0.99 8.74 45.56 0.40 -0.59 16 51 H 0.14 0.24 4.89 -52.49 -0.26 -0.02 16 LS Contribution 416.23 15.07 6.27 6.27 Total: 0.00 -5.75 416.23 -9.19 -14.94 By element: Atomic # 1 Polarization: -3.26 SS G_CDS: -8.27 Total: -11.52 kcal Atomic # 6 Polarization: 0.56 SS G_CDS: 1.01 Total: 1.58 kcal Atomic # 8 Polarization: -1.61 SS G_CDS: -1.02 Total: -2.64 kcal Atomic # 14 Polarization: -1.29 SS G_CDS: -5.77 Total: -7.06 kcal Atomic # 17 Polarization: -0.14 SS G_CDS: -1.41 Total: -1.56 kcal Total LS contribution 6.27 Total: 6.27 kcal Total: -5.75 -9.19 -14.94 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_12058104_10264010.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -143.402 kcal (2) G-P(sol) polarization free energy of solvation -5.748 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -149.149 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.190 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.937 kcal (6) G-S(sol) free energy of system = (1) + (5) -158.339 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds