Wall clock time and date at job start Mon Mar 8 2021 12:59:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.38125 * 119.97569 * 2 1 4 4 C 1.38742 * 119.95425 * 180.02562 * 3 2 1 5 5 O 1.35922 * 120.04297 * 179.97438 * 4 3 2 6 6 C 1.42899 * 117.00145 * 0.02562 * 5 4 3 7 7 O 1.42897 * 109.46980 * 74.99751 * 6 5 4 8 8 Si 1.63105 * 114.00029 * 180.02562 * 7 6 5 9 9 C 1.86303 * 109.46916 * 300.00332 * 8 7 6 10 10 C 1.86302 * 109.47085 * 59.99932 * 8 7 6 11 11 C 1.86300 * 109.47358 * 180.02562 * 8 7 6 12 12 C 1.52995 * 109.47061 * 60.00179 * 11 8 7 13 13 C 1.53004 * 109.46878 * 180.02562 * 11 8 7 14 14 C 1.53000 * 109.46904 * 300.00005 * 11 8 7 15 15 C 1.38711 * 119.91607 * 0.04194 * 4 3 2 16 16 C 1.50704 * 120.01952 * 179.97438 * 15 4 3 17 17 O 1.42904 * 109.46563 * 284.95144 * 16 15 4 18 18 Si 1.86297 * 109.46612 * 164.95662 * 16 15 4 19 19 H 1.48505 * 109.47307 * 59.99840 * 18 16 15 20 20 H 1.48502 * 109.46836 * 179.97438 * 18 16 15 21 21 H 1.48499 * 109.47417 * 299.99445 * 18 16 15 22 22 C 1.38159 * 119.95508 * 359.93602 * 15 4 3 23 23 C 1.38342 * 120.04416 * 0.04003 * 22 15 4 24 24 Cl 1.73605 * 119.95963 * 179.97438 * 23 22 15 25 25 H 1.08998 * 109.47585 * 89.99833 * 1 2 3 26 26 H 1.08996 * 109.46924 * 210.00181 * 1 2 3 27 27 H 1.09002 * 109.47011 * 329.99656 * 1 2 3 28 28 H 1.07997 * 120.02584 * 359.74531 * 3 2 1 29 29 H 1.09000 * 109.47542 * 194.99813 * 6 5 4 30 30 H 1.08999 * 109.46639 * 315.00291 * 6 5 4 31 31 H 1.08991 * 109.47245 * 59.99677 * 9 8 7 32 32 H 1.08998 * 109.46862 * 180.02562 * 9 8 7 33 33 H 1.09002 * 109.46713 * 299.99719 * 9 8 7 34 34 H 1.09000 * 109.47335 * 60.00080 * 10 8 7 35 35 H 1.08998 * 109.47468 * 180.02562 * 10 8 7 36 36 H 1.09001 * 109.47323 * 300.00320 * 10 8 7 37 37 H 1.08990 * 109.47595 * 60.00001 * 12 11 8 38 38 H 1.09002 * 109.46932 * 180.02562 * 12 11 8 39 39 H 1.09011 * 109.47136 * 299.99540 * 12 11 8 40 40 H 1.08994 * 109.46928 * 60.00379 * 13 11 8 41 41 H 1.09001 * 109.46821 * 180.02562 * 13 11 8 42 42 H 1.09000 * 109.47186 * 299.99493 * 13 11 8 43 43 H 1.08998 * 109.47063 * 59.99829 * 14 11 8 44 44 H 1.09004 * 109.46801 * 180.02562 * 14 11 8 45 45 H 1.09002 * 109.46876 * 299.99905 * 14 11 8 46 46 H 1.08994 * 109.47461 * 44.95372 * 16 15 4 47 47 H 0.96694 * 114.00489 * 300.00609 * 17 16 15 48 48 H 1.08000 * 119.97986 * 180.02562 * 22 15 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1971 1.1965 0.0000 4 6 3.5845 1.1960 -0.0005 5 8 4.2655 2.3723 -0.0011 6 6 3.4886 3.5717 -0.0005 7 8 2.9379 3.7818 1.3013 8 14 2.0255 5.1280 1.4263 9 6 3.0630 6.6212 1.0205 10 6 0.5967 5.0225 0.2354 11 6 1.3753 5.2783 3.1656 12 6 2.5491 5.3653 4.1431 13 6 0.5189 6.5408 3.2826 14 6 0.5234 4.0520 3.4994 15 6 4.2759 -0.0066 -0.0020 16 6 5.7829 -0.0099 -0.0031 17 8 6.2589 0.3377 -1.3050 18 14 6.4004 -1.7078 0.4510 19 1 5.9024 -2.6968 -0.5385 20 1 7.8854 -1.7113 0.4493 21 1 5.9058 -2.0690 1.8038 22 6 3.5820 -1.2013 -0.0015 23 6 2.1985 -1.1987 -0.0005 24 17 1.3288 -2.7012 -0.0005 25 1 -0.3634 0.0000 -1.0276 26 1 -0.3633 -0.8899 0.5138 27 1 -0.3633 0.8900 0.5139 28 1 1.6572 2.1318 -0.0042 29 1 4.1239 4.4163 -0.2669 30 1 2.6806 3.4814 -0.7265 31 1 3.4438 6.5335 0.0031 32 1 2.4534 7.5209 1.1045 33 1 3.8990 6.6829 1.7173 34 1 -0.0104 4.1488 0.4727 35 1 -0.0129 5.9223 0.3186 36 1 0.9774 4.9348 -0.7821 37 1 3.1559 6.2388 3.9054 38 1 2.1686 5.4528 5.1608 39 1 3.1588 4.4655 4.0597 40 1 -0.3173 6.4783 2.5863 41 1 0.1388 6.6290 4.3004 42 1 1.1254 7.4146 3.0447 43 1 1.1332 3.1524 3.4158 44 1 0.1426 4.1402 4.5169 45 1 -0.3128 3.9901 2.8029 46 1 6.1484 0.7160 0.7231 47 1 5.9716 -0.2666 -2.0031 48 1 4.1198 -2.1378 -0.0022 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_12058104_14468166.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:59:37 Heat of formation + Delta-G solvation = -158.942172 kcal Electronic energy + Delta-G solvation = -27622.056685 eV Core-core repulsion = 23826.161490 eV Total energy + Delta-G solvation = -3795.895195 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 346.133 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -41.64056 -39.40693 -37.94175 -37.20390 -36.94331 -36.80923 -34.03256 -31.01777 -29.66795 -29.36355 -29.23298 -27.96488 -27.50203 -27.18557 -25.30219 -23.50860 -22.27477 -20.55864 -19.17572 -18.57665 -18.41224 -17.60730 -17.12993 -16.43643 -16.14602 -15.98100 -15.76797 -15.44658 -15.13013 -14.98146 -14.85527 -14.75607 -14.57117 -14.38680 -14.22869 -13.84580 -13.70539 -13.64542 -13.57148 -13.41068 -13.28410 -13.04048 -13.02874 -12.95100 -12.76516 -12.49925 -12.28811 -12.15238 -12.10973 -11.94952 -11.79649 -11.72640 -11.70677 -11.65796 -11.48574 -10.59974 -10.34672 -10.20864 -9.95380 -9.14886 0.03904 0.14472 1.11324 1.16535 1.21265 1.42727 1.52432 1.55014 1.84160 1.93871 2.02565 2.36464 2.44911 3.43305 3.56395 3.57811 3.68188 3.87521 3.94083 4.00814 4.02141 4.02684 4.30768 4.36348 4.46009 4.48672 4.50947 4.56131 4.57175 4.58288 4.60521 4.63656 4.71777 4.77059 4.88857 4.91207 4.96061 5.01583 5.02105 5.02364 5.10196 5.13562 5.24369 5.27803 5.31242 5.38618 5.40746 5.45991 5.48198 6.19820 6.62011 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.125 4.125 2 C -0.029 4.029 3 C -0.188 4.188 4 C 0.170 3.830 5 O -0.281 6.281 6 C 0.246 3.754 7 O -0.645 6.645 8 Si 1.291 2.709 9 C -0.513 4.513 10 C -0.515 4.515 11 C -0.372 4.372 12 C -0.135 4.135 13 C -0.137 4.137 14 C -0.135 4.135 15 C -0.147 4.147 16 C -0.067 4.067 17 O -0.532 6.532 18 Si 0.940 3.060 19 H -0.250 1.250 20 H -0.249 1.249 21 H -0.246 1.246 22 C -0.078 4.078 23 C -0.070 4.070 24 Cl -0.064 7.064 25 H 0.080 0.920 26 H 0.078 0.922 27 H 0.073 0.927 28 H 0.140 0.860 29 H 0.112 0.888 30 H 0.063 0.937 31 H 0.067 0.933 32 H 0.078 0.922 33 H 0.076 0.924 34 H 0.074 0.926 35 H 0.080 0.920 36 H 0.067 0.933 37 H 0.055 0.945 38 H 0.054 0.946 39 H 0.060 0.940 40 H 0.056 0.944 41 H 0.058 0.942 42 H 0.057 0.943 43 H 0.059 0.941 44 H 0.055 0.945 45 H 0.054 0.946 46 H 0.121 0.879 47 H 0.373 0.627 48 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.828 2.250 -1.044 3.081 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C -0.030 4.030 3 C -0.206 4.206 4 C 0.124 3.876 5 O -0.194 6.194 6 C 0.133 3.867 7 O -0.605 6.605 8 Si 1.424 2.576 9 C -0.615 4.615 10 C -0.617 4.617 11 C -0.416 4.416 12 C -0.192 4.192 13 C -0.195 4.195 14 C -0.192 4.192 15 C -0.148 4.148 16 C -0.177 4.177 17 O -0.337 6.337 18 Si 0.763 3.237 19 H -0.174 1.174 20 H -0.173 1.173 21 H -0.169 1.169 22 C -0.097 4.097 23 C -0.096 4.096 24 Cl -0.035 7.035 25 H 0.099 0.901 26 H 0.097 0.903 27 H 0.092 0.908 28 H 0.158 0.842 29 H 0.129 0.871 30 H 0.081 0.919 31 H 0.086 0.914 32 H 0.097 0.903 33 H 0.095 0.905 34 H 0.093 0.907 35 H 0.099 0.901 36 H 0.086 0.914 37 H 0.074 0.926 38 H 0.073 0.927 39 H 0.079 0.921 40 H 0.075 0.925 41 H 0.077 0.923 42 H 0.076 0.924 43 H 0.078 0.922 44 H 0.074 0.926 45 H 0.073 0.927 46 H 0.139 0.861 47 H 0.220 0.780 48 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -1.014 1.591 -0.341 1.918 hybrid contribution -1.073 0.435 -0.405 1.227 sum -2.088 2.026 -0.746 3.003 Atomic orbital electron populations 1.20956 0.89799 1.03994 1.03380 1.19591 0.96859 0.90628 0.95920 1.21131 0.92732 0.98616 1.08161 1.18700 0.89965 0.85704 0.93222 1.86362 1.34713 1.11939 1.86432 1.23482 0.93839 0.86305 0.83077 1.85330 1.73001 1.66507 1.35694 0.76582 0.60748 0.54481 0.65823 1.27035 1.11032 1.18071 1.05403 1.27069 1.17001 1.05399 1.12239 1.25747 1.00852 0.98269 1.16710 1.21519 0.96903 1.01849 0.98948 1.21564 0.99239 0.96190 1.02464 1.21522 0.99159 0.96738 1.01767 1.19533 0.96886 0.90101 1.08329 1.24803 0.90440 1.12943 0.89554 1.86564 1.75175 1.55979 1.15964 0.85855 0.81218 0.75078 0.81577 1.17371 1.17279 1.16950 1.20821 0.92475 0.97791 0.98580 1.20542 0.91906 0.87141 1.10049 1.98371 1.76510 1.31572 1.97069 0.90116 0.90274 0.90761 0.84197 0.87056 0.91907 0.91355 0.90336 0.90501 0.90679 0.90133 0.91367 0.92619 0.92659 0.92099 0.92474 0.92342 0.92446 0.92154 0.92634 0.92705 0.86084 0.78028 0.84283 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.10 9.61 36.01 0.35 0.45 16 2 C -0.03 -0.03 5.88 -104.61 -0.62 -0.64 16 3 C -0.19 -0.17 8.43 -39.44 -0.33 -0.50 16 4 C 0.17 0.32 6.60 -39.22 -0.26 0.06 16 5 O -0.28 -0.51 9.73 -43.31 -0.42 -0.93 16 6 C 0.25 -0.23 5.42 101.05 0.55 0.32 16 7 O -0.65 0.27 8.04 -59.04 -0.47 -0.21 16 8 Si 1.29 -2.92 8.45 -169.99 -1.44 -4.36 16 9 C -0.51 1.00 8.50 101.05 0.86 1.86 16 10 C -0.52 1.27 8.50 101.05 0.86 2.13 16 11 C -0.37 0.42 0.53 -90.62 -0.05 0.37 16 12 C -0.14 0.06 7.85 37.16 0.29 0.35 16 13 C -0.14 0.20 7.85 37.16 0.29 0.50 16 14 C -0.13 0.09 7.85 37.16 0.29 0.38 16 15 C -0.15 -0.23 5.27 -104.47 -0.55 -0.78 16 16 C -0.07 -0.05 2.38 36.01 0.09 0.04 16 17 O -0.53 -0.56 12.88 -35.23 -0.45 -1.01 16 18 Si 0.94 0.13 25.49 -169.99 -4.33 -4.20 16 19 H -0.25 0.05 6.73 56.52 0.38 0.43 16 20 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 21 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 22 C -0.08 -0.11 8.44 -39.57 -0.33 -0.44 16 23 C -0.07 -0.12 6.31 -39.49 -0.25 -0.37 16 24 Cl -0.06 -0.10 27.29 -51.86 -1.42 -1.51 16 25 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 26 H 0.08 -0.04 6.90 -51.93 -0.36 -0.40 16 27 H 0.07 -0.14 8.08 -51.93 -0.42 -0.56 16 28 H 0.14 -0.12 5.86 -52.49 -0.31 -0.43 16 29 H 0.11 -0.35 7.21 -51.93 -0.37 -0.72 16 30 H 0.06 -0.18 5.76 -51.93 -0.30 -0.48 16 31 H 0.07 -0.18 7.48 -51.93 -0.39 -0.56 16 32 H 0.08 -0.17 7.79 -51.93 -0.40 -0.58 16 33 H 0.08 -0.11 7.79 -51.93 -0.40 -0.52 16 34 H 0.07 -0.18 7.79 -51.93 -0.40 -0.58 16 35 H 0.08 -0.21 7.79 -51.93 -0.40 -0.61 16 36 H 0.07 -0.20 7.48 -51.93 -0.39 -0.59 16 37 H 0.05 -0.06 7.79 -51.93 -0.40 -0.46 16 38 H 0.05 -0.01 8.14 -51.93 -0.42 -0.43 16 39 H 0.06 0.01 7.97 -51.92 -0.41 -0.41 16 40 H 0.06 -0.13 7.79 -51.93 -0.40 -0.53 16 41 H 0.06 -0.05 8.14 -51.93 -0.42 -0.48 16 42 H 0.06 -0.12 7.79 -51.93 -0.40 -0.52 16 43 H 0.06 -0.01 7.96 -51.93 -0.41 -0.42 16 44 H 0.05 -0.01 8.14 -51.93 -0.42 -0.44 16 45 H 0.05 -0.08 7.80 -51.93 -0.40 -0.49 16 46 H 0.12 0.10 7.83 -51.93 -0.41 -0.31 16 47 H 0.37 -0.88 8.70 45.56 0.40 -0.48 16 48 H 0.14 0.03 4.89 -52.49 -0.26 -0.23 16 LS Contribution 393.26 15.07 5.93 5.93 Total: 0.00 -4.87 393.26 -8.80 -13.67 By element: Atomic # 1 Polarization: -3.73 SS G_CDS: -7.37 Total: -11.10 kcal Atomic # 6 Polarization: 2.55 SS G_CDS: 1.18 Total: 3.73 kcal Atomic # 8 Polarization: -0.80 SS G_CDS: -1.35 Total: -2.15 kcal Atomic # 14 Polarization: -2.79 SS G_CDS: -5.77 Total: -8.56 kcal Atomic # 17 Polarization: -0.10 SS G_CDS: -1.42 Total: -1.51 kcal Total LS contribution 5.93 Total: 5.93 kcal Total: -4.87 -8.80 -13.67 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_12058104_14468166.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -145.268 kcal (2) G-P(sol) polarization free energy of solvation -4.874 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -150.142 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.800 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.674 kcal (6) G-S(sol) free energy of system = (1) + (5) -158.942 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds