Wall clock time and date at job start Mon Mar 8 2021 12:59:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.38125 * 119.97569 * 2 1 4 4 C 1.38742 * 119.95425 * 180.02562 * 3 2 1 5 5 O 1.35922 * 120.04297 * 179.97438 * 4 3 2 6 6 C 1.42899 * 117.00145 * 0.02562 * 5 4 3 7 7 O 1.42897 * 109.46980 * 74.99751 * 6 5 4 8 8 Si 1.63105 * 114.00029 * 180.02562 * 7 6 5 9 9 C 1.86303 * 109.46916 * 300.00332 * 8 7 6 10 10 C 1.86302 * 109.47085 * 59.99932 * 8 7 6 11 11 C 1.86300 * 109.47358 * 180.02562 * 8 7 6 12 12 C 1.52995 * 109.47061 * 60.00179 * 11 8 7 13 13 C 1.53004 * 109.46878 * 180.02562 * 11 8 7 14 14 C 1.53000 * 109.46904 * 300.00005 * 11 8 7 15 15 C 1.38711 * 119.91607 * 0.04194 * 4 3 2 16 16 C 1.50704 * 120.01952 * 179.97438 * 15 4 3 17 17 O 1.42904 * 109.46563 * 284.95144 * 16 15 4 18 18 Si 1.86297 * 109.46612 * 164.95662 * 16 15 4 19 19 H 1.48505 * 109.47307 * 59.99840 * 18 16 15 20 20 H 1.48502 * 109.46836 * 179.97438 * 18 16 15 21 21 H 1.48499 * 109.47417 * 299.99445 * 18 16 15 22 22 C 1.38159 * 119.95508 * 359.93602 * 15 4 3 23 23 C 1.38342 * 120.04416 * 0.04003 * 22 15 4 24 24 Cl 1.73605 * 119.95963 * 179.97438 * 23 22 15 25 25 H 1.08998 * 109.47585 * 89.99833 * 1 2 3 26 26 H 1.08996 * 109.46924 * 210.00181 * 1 2 3 27 27 H 1.09002 * 109.47011 * 329.99656 * 1 2 3 28 28 H 1.07997 * 120.02584 * 359.74531 * 3 2 1 29 29 H 1.09000 * 109.47542 * 194.99813 * 6 5 4 30 30 H 1.08999 * 109.46639 * 315.00291 * 6 5 4 31 31 H 1.08991 * 109.47245 * 59.99677 * 9 8 7 32 32 H 1.08998 * 109.46862 * 180.02562 * 9 8 7 33 33 H 1.09002 * 109.46713 * 299.99719 * 9 8 7 34 34 H 1.09000 * 109.47335 * 60.00080 * 10 8 7 35 35 H 1.08998 * 109.47468 * 180.02562 * 10 8 7 36 36 H 1.09001 * 109.47323 * 300.00320 * 10 8 7 37 37 H 1.08990 * 109.47595 * 60.00001 * 12 11 8 38 38 H 1.09002 * 109.46932 * 180.02562 * 12 11 8 39 39 H 1.09011 * 109.47136 * 299.99540 * 12 11 8 40 40 H 1.08994 * 109.46928 * 60.00379 * 13 11 8 41 41 H 1.09001 * 109.46821 * 180.02562 * 13 11 8 42 42 H 1.09000 * 109.47186 * 299.99493 * 13 11 8 43 43 H 1.08998 * 109.47063 * 59.99829 * 14 11 8 44 44 H 1.09004 * 109.46801 * 180.02562 * 14 11 8 45 45 H 1.09002 * 109.46876 * 299.99905 * 14 11 8 46 46 H 1.08994 * 109.47461 * 44.95372 * 16 15 4 47 47 H 0.96694 * 114.00489 * 300.00609 * 17 16 15 48 48 H 1.08000 * 119.97986 * 180.02562 * 22 15 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1971 1.1965 0.0000 4 6 3.5845 1.1960 -0.0005 5 8 4.2655 2.3723 -0.0011 6 6 3.4886 3.5717 -0.0005 7 8 2.9379 3.7818 1.3013 8 14 2.0255 5.1280 1.4263 9 6 3.0630 6.6212 1.0205 10 6 0.5967 5.0225 0.2354 11 6 1.3753 5.2783 3.1656 12 6 2.5491 5.3653 4.1431 13 6 0.5189 6.5408 3.2826 14 6 0.5234 4.0520 3.4994 15 6 4.2759 -0.0066 -0.0020 16 6 5.7829 -0.0099 -0.0031 17 8 6.2589 0.3377 -1.3050 18 14 6.4004 -1.7078 0.4510 19 1 5.9024 -2.6968 -0.5385 20 1 7.8854 -1.7113 0.4493 21 1 5.9058 -2.0690 1.8038 22 6 3.5820 -1.2013 -0.0015 23 6 2.1985 -1.1987 -0.0005 24 17 1.3288 -2.7012 -0.0005 25 1 -0.3634 0.0000 -1.0276 26 1 -0.3633 -0.8899 0.5138 27 1 -0.3633 0.8900 0.5139 28 1 1.6572 2.1318 -0.0042 29 1 4.1239 4.4163 -0.2669 30 1 2.6806 3.4814 -0.7265 31 1 3.4438 6.5335 0.0031 32 1 2.4534 7.5209 1.1045 33 1 3.8990 6.6829 1.7173 34 1 -0.0104 4.1488 0.4727 35 1 -0.0129 5.9223 0.3186 36 1 0.9774 4.9348 -0.7821 37 1 3.1559 6.2388 3.9054 38 1 2.1686 5.4528 5.1608 39 1 3.1588 4.4655 4.0597 40 1 -0.3173 6.4783 2.5863 41 1 0.1388 6.6290 4.3004 42 1 1.1254 7.4146 3.0447 43 1 1.1332 3.1524 3.4158 44 1 0.1426 4.1402 4.5169 45 1 -0.3128 3.9901 2.8029 46 1 6.1484 0.7160 0.7231 47 1 5.9716 -0.2666 -2.0031 48 1 4.1198 -2.1378 -0.0022 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_12058104_14468166.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:59:37 Heat of formation + Delta-G solvation = -149.863319 kcal Electronic energy + Delta-G solvation = -27621.662996 eV Core-core repulsion = 23826.161490 eV Total energy + Delta-G solvation = -3795.501506 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 346.133 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -41.65226 -39.39274 -37.98425 -37.22161 -36.86035 -36.78280 -34.04401 -31.05035 -29.48476 -29.33072 -29.08314 -27.84862 -27.40047 -27.09863 -25.31363 -23.51758 -22.30376 -20.46855 -19.17664 -18.56096 -18.33130 -17.63112 -17.12847 -16.42477 -16.13716 -15.92593 -15.75554 -15.45513 -15.12640 -14.88732 -14.79740 -14.68233 -14.57195 -14.37791 -14.10274 -13.77409 -13.58943 -13.52060 -13.38643 -13.28455 -13.19681 -12.97537 -12.93837 -12.91258 -12.75036 -12.40781 -12.33008 -12.21290 -11.96971 -11.88704 -11.82537 -11.74211 -11.65750 -11.58869 -11.43614 -10.41919 -10.38096 -10.09320 -9.98168 -9.20771 -0.00101 0.08284 1.10455 1.14627 1.31653 1.40259 1.50976 1.68674 1.88923 2.05765 2.13809 2.38400 2.50022 3.43216 3.57316 3.67360 3.76595 3.91269 4.02397 4.08265 4.10978 4.11919 4.28165 4.44248 4.48494 4.54022 4.65282 4.72099 4.72721 4.73209 4.77550 4.77755 4.81040 4.82333 4.89813 4.98606 4.99199 5.07413 5.08420 5.08777 5.16231 5.24558 5.27386 5.35923 5.39454 5.45176 5.46666 5.59307 5.64577 6.20287 6.74045 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.125 4.125 2 C -0.034 4.034 3 C -0.190 4.190 4 C 0.158 3.842 5 O -0.298 6.298 6 C 0.231 3.769 7 O -0.661 6.661 8 Si 1.321 2.679 9 C -0.521 4.521 10 C -0.518 4.518 11 C -0.382 4.382 12 C -0.138 4.138 13 C -0.141 4.141 14 C -0.137 4.137 15 C -0.156 4.156 16 C -0.066 4.066 17 O -0.546 6.546 18 Si 0.971 3.029 19 H -0.241 1.241 20 H -0.267 1.267 21 H -0.259 1.259 22 C -0.083 4.083 23 C -0.083 4.083 24 Cl -0.067 7.067 25 H 0.089 0.911 26 H 0.075 0.925 27 H 0.087 0.913 28 H 0.157 0.843 29 H 0.131 0.869 30 H 0.084 0.916 31 H 0.076 0.924 32 H 0.081 0.919 33 H 0.069 0.931 34 H 0.076 0.924 35 H 0.084 0.916 36 H 0.077 0.923 37 H 0.061 0.939 38 H 0.047 0.953 39 H 0.052 0.948 40 H 0.067 0.933 41 H 0.048 0.952 42 H 0.063 0.937 43 H 0.052 0.948 44 H 0.046 0.954 45 H 0.065 0.935 46 H 0.115 0.885 47 H 0.387 0.613 48 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.518 2.790 -2.007 4.260 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C -0.035 4.035 3 C -0.208 4.208 4 C 0.112 3.888 5 O -0.212 6.212 6 C 0.119 3.881 7 O -0.622 6.622 8 Si 1.452 2.548 9 C -0.623 4.623 10 C -0.621 4.621 11 C -0.425 4.425 12 C -0.195 4.195 13 C -0.198 4.198 14 C -0.194 4.194 15 C -0.158 4.158 16 C -0.176 4.176 17 O -0.353 6.353 18 Si 0.794 3.206 19 H -0.165 1.165 20 H -0.191 1.191 21 H -0.183 1.183 22 C -0.102 4.102 23 C -0.110 4.110 24 Cl -0.038 7.038 25 H 0.108 0.892 26 H 0.094 0.906 27 H 0.105 0.895 28 H 0.174 0.826 29 H 0.148 0.852 30 H 0.101 0.899 31 H 0.095 0.905 32 H 0.100 0.900 33 H 0.088 0.912 34 H 0.095 0.905 35 H 0.103 0.897 36 H 0.096 0.904 37 H 0.080 0.920 38 H 0.066 0.934 39 H 0.071 0.929 40 H 0.086 0.914 41 H 0.067 0.933 42 H 0.082 0.918 43 H 0.071 0.929 44 H 0.065 0.935 45 H 0.084 0.916 46 H 0.133 0.867 47 H 0.235 0.765 48 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges -1.714 2.133 -1.299 3.029 hybrid contribution -0.849 0.306 -0.076 0.906 sum -2.563 2.440 -1.374 3.796 Atomic orbital electron populations 1.21010 0.88583 1.04473 1.04083 1.19833 0.97839 0.90410 0.95375 1.21322 0.92508 0.99267 1.07744 1.18910 0.90509 0.85968 0.93380 1.86341 1.35795 1.12550 1.86472 1.23912 0.94979 0.85939 0.83278 1.85321 1.73445 1.67239 1.36166 0.76059 0.60439 0.53733 0.64543 1.27115 1.10988 1.18437 1.05796 1.27065 1.16758 1.05725 1.12565 1.25938 1.00539 0.98189 1.17791 1.21546 0.97351 1.01691 0.98919 1.21608 0.99677 0.96279 1.02261 1.21541 0.99505 0.96708 1.01613 1.19651 0.97219 0.90273 1.08615 1.24818 0.90152 1.13178 0.89450 1.86521 1.75379 1.56879 1.16479 0.85423 0.79605 0.74663 0.80900 1.16498 1.19139 1.18263 1.20927 0.92582 0.98076 0.98595 1.20699 0.92148 0.87359 1.10748 1.98364 1.76554 1.31793 1.97126 0.89215 0.90640 0.89454 0.82604 0.85176 0.89858 0.90501 0.89984 0.91197 0.90498 0.89734 0.90434 0.92022 0.93432 0.92940 0.91415 0.93254 0.91761 0.92937 0.93517 0.91563 0.86669 0.76459 0.83628 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 0.29 9.61 71.24 0.68 0.97 16 2 C -0.03 -0.06 5.88 -19.86 -0.12 -0.18 16 3 C -0.19 -0.27 8.43 22.36 0.19 -0.08 16 4 C 0.16 0.63 6.60 22.50 0.15 0.78 16 5 O -0.30 -1.12 9.73 -69.90 -0.68 -1.80 16 6 C 0.23 -0.59 5.42 113.37 0.61 0.03 16 7 O -0.66 0.75 8.04 -126.21 -1.01 -0.26 16 8 Si 1.32 -6.88 8.45 68.60 0.58 -6.30 16 9 C -0.52 2.44 8.50 113.37 0.96 3.41 16 10 C -0.52 3.41 8.50 113.37 0.96 4.37 16 11 C -0.38 0.80 0.53 -10.79 -0.01 0.80 16 12 C -0.14 -0.01 7.85 71.98 0.56 0.55 16 13 C -0.14 0.44 7.85 71.98 0.56 1.00 16 14 C -0.14 0.13 7.85 71.98 0.56 0.70 16 15 C -0.16 -0.56 5.27 -19.77 -0.10 -0.67 16 16 C -0.07 -0.14 2.38 71.24 0.17 0.02 16 17 O -0.55 -1.35 12.88 -148.98 -1.92 -3.27 16 18 Si 0.97 0.79 25.49 68.60 1.75 2.54 16 19 H -0.24 0.18 6.73 99.48 0.67 0.85 16 20 H -0.27 -0.94 7.11 99.48 0.71 -0.23 16 21 H -0.26 -0.69 7.11 99.48 0.71 0.02 16 22 C -0.08 -0.26 8.44 22.28 0.19 -0.07 16 23 C -0.08 -0.30 6.31 22.33 0.14 -0.16 16 24 Cl -0.07 -0.22 27.29 -2.72 -0.07 -0.30 16 25 H 0.09 -0.37 8.14 -2.39 -0.02 -0.39 16 26 H 0.07 -0.11 6.90 -2.39 -0.02 -0.12 16 27 H 0.09 -0.44 8.08 -2.39 -0.02 -0.46 16 28 H 0.16 -0.43 5.86 -2.91 -0.02 -0.45 16 29 H 0.13 -0.94 7.21 -2.39 -0.02 -0.95 16 30 H 0.08 -0.60 5.76 -2.39 -0.01 -0.62 16 31 H 0.08 -0.49 7.48 -2.39 -0.02 -0.51 16 32 H 0.08 -0.44 7.79 -2.39 -0.02 -0.45 16 33 H 0.07 -0.21 7.79 -2.39 -0.02 -0.23 16 34 H 0.08 -0.50 7.79 -2.39 -0.02 -0.52 16 35 H 0.08 -0.59 7.79 -2.39 -0.02 -0.61 16 36 H 0.08 -0.63 7.48 -2.39 -0.02 -0.65 16 37 H 0.06 -0.09 7.79 -2.39 -0.02 -0.11 16 38 H 0.05 0.06 8.14 -2.39 -0.02 0.04 16 39 H 0.05 0.08 7.97 -2.38 -0.02 0.06 16 40 H 0.07 -0.36 7.79 -2.39 -0.02 -0.38 16 41 H 0.05 -0.07 8.14 -2.39 -0.02 -0.08 16 42 H 0.06 -0.29 7.79 -2.39 -0.02 -0.31 16 43 H 0.05 0.03 7.96 -2.39 -0.02 0.01 16 44 H 0.05 0.02 8.14 -2.38 -0.02 0.01 16 45 H 0.07 -0.23 7.80 -2.39 -0.02 -0.25 16 46 H 0.12 0.33 7.83 -2.39 -0.02 0.31 16 47 H 0.39 -1.75 8.70 -74.06 -0.64 -2.40 16 48 H 0.15 0.11 4.89 -2.91 -0.01 0.10 16 Total: 0.00 -11.43 393.26 5.19 -6.23 By element: Atomic # 1 Polarization: -9.35 SS G_CDS: 1.02 Total: -8.33 kcal Atomic # 6 Polarization: 5.95 SS G_CDS: 5.53 Total: 11.48 kcal Atomic # 8 Polarization: -1.72 SS G_CDS: -3.61 Total: -5.33 kcal Atomic # 14 Polarization: -6.09 SS G_CDS: 2.33 Total: -3.76 kcal Atomic # 17 Polarization: -0.22 SS G_CDS: -0.07 Total: -0.30 kcal Total: -11.43 5.19 -6.23 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_12058104_14468166.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -143.630 kcal (2) G-P(sol) polarization free energy of solvation -11.426 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -155.056 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 5.193 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -6.233 kcal (6) G-S(sol) free energy of system = (1) + (5) -149.863 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds