Wall clock time and date at job start Mon Mar 8 2021 15:13:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.38128 * 119.97417 * 2 1 4 4 C 1.38739 * 119.95314 * 179.97438 * 3 2 1 5 5 O 1.35920 * 120.04426 * 179.97438 * 4 3 2 6 6 C 1.42905 * 116.99687 * 0.02562 * 5 4 3 7 7 C 1.50701 * 109.47046 * 179.97438 * 6 5 4 8 8 C 1.38234 * 120.00243 * 89.99998 * 7 6 5 9 9 C 1.38234 * 120.00240 * 180.02562 * 8 7 6 10 10 C 1.38233 * 120.00037 * 0.26327 * 9 8 7 11 11 Si 1.86796 * 120.00338 * 179.72477 * 10 9 8 12 12 C 1.86298 * 109.47345 * 89.99399 * 11 10 9 13 13 C 1.86292 * 109.47215 * 209.99657 * 11 10 9 14 14 C 1.86304 * 109.46695 * 329.99459 * 11 10 9 15 15 C 1.38238 * 119.99752 * 359.47832 * 10 9 8 16 16 C 1.38234 * 120.00005 * 0.52168 * 15 10 9 17 17 C 1.38705 * 119.91808 * 0.25144 * 4 3 2 18 18 C 1.50697 * 120.02441 * 179.71891 * 17 4 3 19 19 O 1.42900 * 109.47316 * 285.00463 * 18 17 4 20 20 Si 1.86297 * 109.47331 * 165.00099 * 18 17 4 21 21 H 1.48507 * 109.47038 * 60.00129 * 20 18 17 22 22 H 1.48495 * 109.47400 * 180.02562 * 20 18 17 23 23 H 1.48504 * 109.47280 * 300.00463 * 20 18 17 24 24 C 1.38167 * 119.95516 * 359.54019 * 17 4 3 25 25 C 1.38352 * 120.04051 * 0.43645 * 24 17 4 26 26 Cl 1.73592 * 119.95646 * 179.77031 * 25 24 17 27 27 H 1.09003 * 109.47240 * 90.00156 * 1 2 3 28 28 H 1.08999 * 109.47095 * 210.00106 * 1 2 3 29 29 H 1.09000 * 109.47834 * 330.00274 * 1 2 3 30 30 H 1.07991 * 120.02472 * 0.02562 * 3 2 1 31 31 H 1.08996 * 109.47095 * 59.99705 * 6 5 4 32 32 H 1.08999 * 109.47350 * 299.99641 * 6 5 4 33 33 H 1.07999 * 119.99751 * 359.97438 * 8 7 6 34 34 H 1.08002 * 119.99744 * 179.97438 * 9 8 7 35 35 H 1.08998 * 109.47461 * 60.00145 * 12 11 10 36 36 H 1.08995 * 109.47041 * 180.02562 * 12 11 10 37 37 H 1.09000 * 109.46941 * 300.00096 * 12 11 10 38 38 H 1.08997 * 109.47556 * 59.99827 * 13 11 10 39 39 H 1.09003 * 109.47107 * 179.97438 * 13 11 10 40 40 H 1.09001 * 109.47298 * 299.99936 * 13 11 10 41 41 H 1.09004 * 109.47045 * 60.00345 * 14 11 10 42 42 H 1.09003 * 109.47110 * 180.02562 * 14 11 10 43 43 H 1.09000 * 109.47158 * 300.00133 * 14 11 10 44 44 H 1.07999 * 119.99927 * 180.24100 * 15 10 9 45 45 H 1.08001 * 120.00310 * 179.72165 * 16 15 10 46 46 H 1.09004 * 109.46755 * 45.00021 * 18 17 4 47 47 H 0.96708 * 114.00100 * 179.97438 * 19 18 17 48 48 H 1.07991 * 119.97908 * 180.20745 * 24 17 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1971 1.1965 0.0000 4 6 3.5845 1.1960 0.0005 5 8 4.2654 2.3724 0.0000 6 6 3.4884 3.5717 -0.0005 7 6 4.4077 4.7658 -0.0004 8 6 4.8298 5.3133 -1.1975 9 6 5.6735 6.4083 -1.1974 10 6 6.0995 6.9525 -0.0002 11 14 7.2457 8.4275 0.0000 12 6 6.2399 9.9956 0.0034 13 6 8.3224 8.3770 1.5194 14 6 8.3180 8.3807 -1.5228 15 6 5.6731 6.4084 1.1969 16 6 4.8294 5.3134 1.1968 17 6 4.2758 -0.0064 -0.0042 18 6 5.7828 -0.0098 -0.0100 19 8 6.2549 0.3402 -1.3126 20 14 6.4018 -1.7085 0.4392 21 1 5.9008 -2.6957 -0.5506 22 1 7.8868 -1.7116 0.4341 23 1 5.9112 -2.0722 1.7928 24 6 3.5819 -1.2012 0.0002 25 6 2.1984 -1.1987 0.0001 26 17 1.3288 -2.7011 -0.0004 27 1 -0.3634 0.0000 -1.0277 28 1 -0.3633 -0.8900 0.5138 29 1 -0.3635 0.8900 0.5138 30 1 1.6571 2.1318 0.0004 31 1 2.8596 3.5976 0.8894 32 1 2.8596 3.5969 -0.8905 33 1 4.5011 4.8850 -2.1328 34 1 6.0036 6.8357 -2.1327 35 1 5.6126 10.0230 0.8942 36 1 6.9088 10.8562 0.0030 37 1 5.6100 10.0251 -0.8857 38 1 8.9109 7.4595 1.5175 39 1 8.9916 9.2374 1.5193 40 1 7.6951 8.4043 2.4104 41 1 7.6880 8.4102 -2.4119 42 1 8.9872 9.2411 -1.5226 43 1 8.9064 7.4632 -1.5248 44 1 6.0028 6.8360 2.1322 45 1 4.4999 4.8854 2.1320 46 1 6.1505 0.7149 0.7165 47 1 7.2187 0.3584 -1.3899 48 1 4.1198 -2.1376 -0.0001 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_12058104_9276060.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 15:13:09 Heat of formation + Delta-G solvation = -66.228586 kcal Electronic energy + Delta-G solvation = -27447.052926 eV Core-core repulsion = 23616.493343 eV Total energy + Delta-G solvation = -3830.559583 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 364.117 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -41.66049 -40.12581 -38.83957 -37.88880 -37.16169 -34.32075 -33.01639 -31.86771 -30.86926 -29.49200 -29.39231 -28.28695 -28.26387 -27.40984 -25.27062 -23.85355 -23.47245 -22.34622 -21.84494 -18.85386 -18.53844 -18.15724 -17.39827 -17.28049 -17.04827 -16.23998 -15.78382 -15.67365 -15.48715 -15.06733 -14.94559 -14.81389 -14.50725 -14.32126 -14.07804 -14.04394 -13.85949 -13.72907 -13.64949 -13.46210 -13.39696 -13.16421 -13.12915 -13.10957 -12.96090 -12.90786 -12.84471 -12.53989 -12.28134 -12.17743 -11.96178 -11.85115 -11.66849 -11.55816 -10.91522 -10.76593 -10.75111 -10.31994 -10.03852 -9.79161 -9.67900 -9.20539 -0.05722 0.04726 0.16640 0.53640 1.06060 1.10150 1.39183 1.44048 1.83424 1.84550 1.97626 2.03281 2.26329 2.31733 2.67557 3.02258 3.32795 3.52191 3.65636 3.79345 3.81771 3.88190 3.96987 4.12370 4.19031 4.24728 4.29884 4.38969 4.46408 4.54111 4.62902 4.70714 4.72590 4.85349 4.85531 4.87299 4.89348 4.90072 4.90485 4.91453 4.94864 5.01532 5.12240 5.17301 5.22497 5.41165 5.42747 5.57983 5.59974 5.61415 5.68600 5.71603 6.13297 6.22292 6.78433 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 C -0.030 4.030 3 C -0.200 4.200 4 C 0.157 3.843 5 O -0.306 6.306 6 C 0.095 3.905 7 C -0.101 4.101 8 C -0.120 4.120 9 C -0.104 4.104 10 C -0.372 4.372 11 Si 1.126 2.874 12 C -0.462 4.462 13 C -0.462 4.462 14 C -0.463 4.463 15 C -0.104 4.104 16 C -0.120 4.120 17 C -0.122 4.122 18 C -0.069 4.069 19 O -0.558 6.558 20 Si 0.968 3.032 21 H -0.261 1.261 22 H -0.246 1.246 23 H -0.255 1.255 24 C -0.081 4.081 25 C -0.086 4.086 26 Cl -0.065 7.065 27 H 0.087 0.913 28 H 0.076 0.924 29 H 0.090 0.910 30 H 0.162 0.838 31 H 0.087 0.913 32 H 0.081 0.919 33 H 0.124 0.876 34 H 0.138 0.862 35 H 0.068 0.932 36 H 0.074 0.926 37 H 0.067 0.933 38 H 0.067 0.933 39 H 0.074 0.926 40 H 0.072 0.928 41 H 0.071 0.929 42 H 0.074 0.926 43 H 0.067 0.933 44 H 0.140 0.860 45 H 0.129 0.871 46 H 0.082 0.918 47 H 0.395 0.605 48 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.729 4.414 1.315 4.663 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C -0.031 4.031 3 C -0.219 4.219 4 C 0.111 3.889 5 O -0.219 6.219 6 C 0.021 3.979 7 C -0.101 4.101 8 C -0.138 4.138 9 C -0.122 4.122 10 C -0.412 4.412 11 Si 1.314 2.686 12 C -0.569 4.569 13 C -0.569 4.569 14 C -0.570 4.570 15 C -0.121 4.121 16 C -0.138 4.138 17 C -0.123 4.123 18 C -0.179 4.179 19 O -0.367 6.367 20 Si 0.790 3.210 21 H -0.186 1.186 22 H -0.170 1.170 23 H -0.179 1.179 24 C -0.100 4.100 25 C -0.112 4.112 26 Cl -0.037 7.037 27 H 0.106 0.894 28 H 0.094 0.906 29 H 0.109 0.891 30 H 0.179 0.821 31 H 0.105 0.895 32 H 0.100 0.900 33 H 0.142 0.858 34 H 0.155 0.845 35 H 0.087 0.913 36 H 0.093 0.907 37 H 0.086 0.914 38 H 0.086 0.914 39 H 0.093 0.907 40 H 0.092 0.908 41 H 0.090 0.910 42 H 0.093 0.907 43 H 0.086 0.914 44 H 0.158 0.842 45 H 0.147 0.853 46 H 0.100 0.900 47 H 0.245 0.755 48 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 0.471 3.481 1.420 3.788 hybrid contribution -0.024 -0.107 -0.128 0.169 sum 0.447 3.373 1.291 3.640 Atomic orbital electron populations 1.20996 0.88269 1.04616 1.04026 1.19856 0.97976 0.90299 0.94962 1.21339 0.92236 0.99540 1.08798 1.18905 0.90607 0.85772 0.93637 1.86216 1.36064 1.12042 1.87590 1.21837 0.92586 0.80078 1.03413 1.19577 1.00231 0.96032 0.94305 1.21353 0.98000 0.96984 0.97510 1.21370 0.96201 0.95332 0.99248 1.28034 1.07273 1.12025 0.93819 0.77174 0.63550 0.61850 0.66063 1.26276 1.09557 1.16575 1.04442 1.26275 1.10249 1.04667 1.15726 1.26295 1.10237 1.04644 1.15857 1.21390 0.96185 0.95335 0.99215 1.21374 0.97942 0.96992 0.97484 1.18700 0.95111 0.90339 1.08191 1.24571 0.92515 1.11631 0.89159 1.86475 1.28271 1.93033 1.28918 0.85481 0.80333 0.75161 0.79983 1.18608 1.16990 1.17868 1.20891 0.92779 0.97945 0.98371 1.20665 0.91947 0.87579 1.11056 1.98359 1.76415 1.31738 1.97140 0.89438 0.90556 0.89134 0.82093 0.89479 0.90049 0.85839 0.84470 0.91317 0.90680 0.91406 0.91358 0.90658 0.90849 0.90973 0.90656 0.91388 0.84244 0.85295 0.89966 0.75533 0.84089 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.18 9.61 71.23 0.68 0.87 16 2 C -0.03 -0.09 5.88 -19.86 -0.12 -0.21 16 3 C -0.20 -0.48 8.69 22.36 0.19 -0.29 16 4 C 0.16 0.92 6.66 22.50 0.15 1.07 16 5 O -0.31 -1.78 9.45 -92.65 -0.88 -2.66 16 6 C 0.09 0.08 4.87 71.24 0.35 0.42 16 7 C -0.10 -0.28 5.51 -19.86 -0.11 -0.39 16 8 C -0.12 -0.33 9.70 22.27 0.22 -0.11 16 9 C -0.10 -0.07 9.29 22.27 0.21 0.13 16 10 C -0.37 0.33 4.59 22.27 0.10 0.43 16 11 Si 1.13 -6.73 12.32 68.60 0.85 -5.89 16 12 C -0.46 1.87 8.65 113.37 0.98 2.85 16 13 C -0.46 2.13 8.54 113.37 0.97 3.10 16 14 C -0.46 1.97 8.53 113.37 0.97 2.94 16 15 C -0.10 0.00 9.29 22.27 0.21 0.20 16 16 C -0.12 -0.20 9.70 22.27 0.22 0.01 16 17 C -0.12 -0.82 5.31 -19.77 -0.10 -0.93 16 18 C -0.07 -0.25 2.37 71.23 0.17 -0.08 16 19 O -0.56 -2.48 12.86 -148.98 -1.92 -4.40 16 20 Si 0.97 1.52 25.49 68.60 1.75 3.27 16 21 H -0.26 -1.04 6.74 99.48 0.67 -0.37 16 22 H -0.25 -0.10 7.11 99.48 0.71 0.61 16 23 H -0.25 -0.71 7.11 99.48 0.71 0.00 16 24 C -0.08 -0.53 8.44 22.28 0.19 -0.34 16 25 C -0.09 -0.50 6.31 22.33 0.14 -0.36 16 26 Cl -0.07 -0.33 27.29 -2.72 -0.07 -0.41 16 27 H 0.09 -0.23 8.14 -2.39 -0.02 -0.25 16 28 H 0.08 -0.06 6.90 -2.39 -0.02 -0.07 16 29 H 0.09 -0.44 8.08 -2.39 -0.02 -0.46 16 30 H 0.16 -0.46 6.30 -2.92 -0.02 -0.48 16 31 H 0.09 -0.23 7.60 -2.39 -0.02 -0.25 16 32 H 0.08 -0.11 7.61 -2.39 -0.02 -0.13 16 33 H 0.12 0.13 8.06 -2.91 -0.02 0.11 16 34 H 0.14 -0.44 7.43 -2.91 -0.02 -0.46 16 35 H 0.07 -0.24 7.96 -2.39 -0.02 -0.26 16 36 H 0.07 -0.34 7.96 -2.39 -0.02 -0.36 16 37 H 0.07 -0.23 7.96 -2.39 -0.02 -0.25 16 38 H 0.07 -0.25 7.96 -2.39 -0.02 -0.27 16 39 H 0.07 -0.37 7.96 -2.39 -0.02 -0.39 16 40 H 0.07 -0.38 7.69 -2.39 -0.02 -0.39 16 41 H 0.07 -0.33 7.69 -2.38 -0.02 -0.35 16 42 H 0.07 -0.35 7.96 -2.39 -0.02 -0.37 16 43 H 0.07 -0.22 7.96 -2.39 -0.02 -0.24 16 44 H 0.14 -0.59 7.44 -2.91 -0.02 -0.61 16 45 H 0.13 -0.14 8.06 -2.91 -0.02 -0.16 16 46 H 0.08 0.16 7.83 -2.38 -0.02 0.14 16 47 H 0.39 -1.80 8.74 -74.05 -0.65 -2.45 16 48 H 0.14 0.69 4.89 -2.92 -0.01 0.68 16 Total: 0.00 -13.96 408.48 6.17 -7.79 By element: Atomic # 1 Polarization: -8.08 SS G_CDS: 1.03 Total: -7.05 kcal Atomic # 6 Polarization: 3.93 SS G_CDS: 5.41 Total: 9.33 kcal Atomic # 8 Polarization: -4.26 SS G_CDS: -2.79 Total: -7.06 kcal Atomic # 14 Polarization: -5.21 SS G_CDS: 2.59 Total: -2.62 kcal Atomic # 17 Polarization: -0.33 SS G_CDS: -0.07 Total: -0.41 kcal Total: -13.96 6.17 -7.79 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_12058104_9276060.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.434 kcal (2) G-P(sol) polarization free energy of solvation -13.963 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.397 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 6.168 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -7.795 kcal (6) G-S(sol) free energy of system = (1) + (5) -66.229 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds