Wall clock time and date at job start Mon Mar 8 2021 12:42:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.52994 * 109.47182 * 2 1 4 4 C 1.53007 * 109.46745 * 240.00144 * 2 1 3 5 5 O 1.42896 * 109.47370 * 120.00209 * 2 1 3 6 6 C 1.42907 * 114.00042 * 59.99656 * 5 2 1 7 7 H 1.09003 * 112.84494 * 18.80765 * 6 5 2 8 8 C 1.53785 * 113.61225 * 149.99866 * 6 5 2 9 9 C 1.53781 * 87.07748 * 139.98427 * 8 6 5 10 10 H 1.09000 * 113.61722 * 89.20263 * 9 8 6 11 11 C 1.53004 * 113.61397 * 220.01949 * 9 8 6 12 12 O 1.42896 * 109.47192 * 185.00139 * 11 9 8 13 13 C 1.35903 * 117.00071 * 180.02562 * 12 11 9 14 14 C 1.38716 * 120.04672 * 179.97438 * 13 12 11 15 15 C 1.50699 * 120.01784 * 0.02562 * 14 13 12 16 16 O 1.42898 * 109.46964 * 284.72375 * 15 14 13 17 17 Si 1.86301 * 109.47146 * 164.72293 * 15 14 13 18 18 C 1.38172 * 119.96829 * 179.72727 * 14 13 12 19 19 C 1.38229 * 120.06694 * 0.27556 * 18 14 13 20 20 C 1.38401 * 120.09799 * 359.95426 * 19 18 14 21 21 Cl 1.73601 * 119.98479 * 180.02562 * 20 19 18 22 22 C 1.38236 * 120.03285 * 0.02562 * 20 19 18 23 23 C 1.53771 * 113.61604 * 247.49721 * 6 5 2 24 24 H 1.08996 * 109.47060 * 299.99430 * 1 2 3 25 25 H 1.08999 * 109.47183 * 59.99779 * 1 2 3 26 26 H 1.09002 * 109.46857 * 179.97438 * 1 2 3 27 27 H 1.08997 * 109.47123 * 180.02562 * 3 2 1 28 28 H 1.08999 * 109.47242 * 300.00184 * 3 2 1 29 29 H 1.08997 * 109.47122 * 60.00071 * 3 2 1 30 30 H 1.09000 * 109.46911 * 299.99579 * 4 2 1 31 31 H 1.08999 * 109.47218 * 60.00098 * 4 2 1 32 32 H 1.09004 * 109.46479 * 179.97438 * 4 2 1 33 33 H 1.08998 * 113.61491 * 25.43652 * 8 6 5 34 34 H 1.08998 * 113.69121 * 254.54290 * 8 6 5 35 35 H 1.09003 * 109.46794 * 65.00160 * 11 9 8 36 36 H 1.08999 * 109.46801 * 305.00426 * 11 9 8 37 37 H 1.09002 * 109.46959 * 44.72346 * 15 14 13 38 38 H 0.96698 * 113.99898 * 299.99550 * 16 15 14 39 39 H 1.48503 * 110.00152 * 180.02562 * 17 15 14 40 40 H 1.48498 * 110.00118 * 301.32243 * 17 15 14 41 41 H 1.08003 * 119.97022 * 180.25144 * 18 14 13 42 42 H 1.08000 * 119.94730 * 179.97438 * 19 18 14 43 43 H 1.07992 * 120.03973 * 180.02562 * 22 20 19 44 44 H 1.09003 * 113.61667 * 105.46859 * 23 6 5 45 45 H 1.09005 * 113.61960 * 334.57301 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0399 -0.7213 -1.2493 5 8 2.0064 -0.6736 1.1667 6 6 1.5847 -2.0356 1.2644 7 1 1.2523 -2.4452 0.3105 8 6 2.5838 -2.9380 2.0077 9 6 1.3668 -3.6120 2.6630 10 1 0.9746 -4.4543 2.0930 11 6 1.5713 -3.9403 4.1434 12 8 0.4401 -4.6642 4.6315 13 6 0.4620 -5.0349 5.9387 14 6 -0.6038 -5.7397 6.4788 15 6 -1.7871 -6.0954 5.6159 16 8 -2.5885 -4.9316 5.4034 17 14 -2.8050 -7.4036 6.4664 18 6 -0.5774 -6.1208 7.8066 19 6 0.5076 -5.7955 8.5990 20 6 1.5703 -5.0883 8.0643 21 17 2.9318 -4.6819 9.0618 22 6 1.5483 -4.7054 6.7362 23 6 0.6078 -2.2963 2.4230 24 1 -0.3633 0.5137 0.8900 25 1 -0.3633 0.5139 -0.8900 26 1 -0.3633 -1.0277 -0.0005 27 1 3.1300 1.4424 -0.0005 28 1 1.6766 1.9563 -0.8900 29 1 1.6767 1.9562 0.8900 30 1 1.6766 -1.7489 -1.2493 31 1 1.6766 -0.2074 -2.1393 32 1 3.1300 -0.7208 -1.2495 33 1 3.2172 -2.3999 2.7129 34 1 3.1486 -3.5998 1.3511 35 1 1.6822 -3.0150 4.7087 36 1 2.4691 -4.5473 4.2602 37 1 -1.4359 -6.4750 4.6564 38 1 -2.9358 -4.5394 6.2162 39 1 -3.9747 -7.7636 5.6253 40 1 -1.9739 -8.6074 6.7219 41 1 -1.4054 -6.6730 8.2261 42 1 0.5261 -6.0940 9.6367 43 1 2.3777 -4.1539 6.3187 44 1 -0.4236 -2.4398 2.1006 45 1 0.7009 -1.5828 3.2418 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_13616168_14598384.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:42:48 Heat of formation + Delta-G solvation = -69.819246 kcal Electronic energy + Delta-G solvation = -25931.529739 eV Core-core repulsion = 22135.942166 eV Total energy + Delta-G solvation = -3795.587572 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 327.132 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -41.64506 -40.84335 -39.12403 -38.07610 -37.89578 -37.05049 -33.94395 -32.62009 -31.41448 -29.43964 -28.38305 -28.29406 -26.71675 -26.63072 -24.55618 -23.07714 -22.58693 -20.85536 -20.66211 -19.44477 -18.28080 -17.76280 -17.30834 -17.14704 -16.87190 -16.59255 -16.17378 -15.96236 -15.63741 -15.54331 -15.17716 -14.77051 -14.56108 -14.49647 -14.19673 -14.17174 -13.56843 -13.48520 -13.36081 -13.25259 -13.17889 -12.89024 -12.79042 -12.71533 -12.64293 -12.35760 -12.24168 -12.10283 -12.02477 -11.92371 -11.79958 -11.70863 -11.38420 -11.21892 -10.40619 -10.39534 -10.00920 -9.32836 -5.01311 -0.10149 0.20567 1.00086 1.30176 1.66136 1.98461 2.00424 2.41317 2.71585 3.40904 3.51222 3.51893 3.62248 3.72328 3.74102 3.77096 3.88197 3.94134 3.95327 4.01985 4.06872 4.09445 4.18594 4.26968 4.37519 4.43835 4.50579 4.59244 4.63043 4.65094 4.73306 4.73691 4.76025 4.82143 4.88932 4.91248 4.93059 4.97508 5.09321 5.10919 5.13034 5.15651 5.27506 5.30457 5.35152 5.50316 6.22683 6.38459 6.80925 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C 0.098 3.902 3 C -0.139 4.139 4 C -0.177 4.177 5 O -0.380 6.380 6 C 0.061 3.939 7 H 0.100 0.900 8 C -0.121 4.121 9 C -0.103 4.103 10 H 0.104 0.896 11 C 0.067 3.933 12 O -0.312 6.312 13 C 0.152 3.848 14 C -0.161 4.161 15 C -0.066 4.066 16 O -0.553 6.553 17 Si 0.786 3.214 18 C -0.057 4.057 19 C -0.145 4.145 20 C -0.001 4.001 21 Cl -0.066 7.066 22 C -0.212 4.212 23 C -0.146 4.146 24 H 0.056 0.944 25 H 0.076 0.924 26 H 0.058 0.942 27 H 0.059 0.941 28 H 0.084 0.916 29 H 0.057 0.943 30 H 0.062 0.938 31 H 0.077 0.923 32 H 0.060 0.940 33 H 0.091 0.909 34 H 0.088 0.912 35 H 0.068 0.932 36 H 0.074 0.926 37 H 0.094 0.906 38 H 0.393 0.607 39 H -0.300 1.300 40 H -0.282 1.282 41 H 0.174 0.826 42 H 0.161 0.839 43 H 0.144 0.856 44 H 0.068 0.932 45 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.199 0.062 0.840 1.465 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.232 4.232 2 C 0.059 3.941 3 C -0.196 4.196 4 C -0.234 4.234 5 O -0.300 6.300 6 C 0.003 3.997 7 H 0.117 0.883 8 C -0.159 4.159 9 C -0.121 4.121 10 H 0.122 0.878 11 C -0.008 4.008 12 O -0.225 6.225 13 C 0.105 3.895 14 C -0.162 4.162 15 C -0.175 4.175 16 O -0.360 6.360 17 Si 0.691 3.309 18 C -0.075 4.075 19 C -0.164 4.164 20 C -0.028 4.028 21 Cl -0.037 7.037 22 C -0.231 4.231 23 C -0.183 4.183 24 H 0.075 0.925 25 H 0.095 0.905 26 H 0.077 0.923 27 H 0.078 0.922 28 H 0.103 0.897 29 H 0.076 0.924 30 H 0.081 0.919 31 H 0.096 0.904 32 H 0.080 0.920 33 H 0.109 0.891 34 H 0.107 0.893 35 H 0.086 0.914 36 H 0.092 0.908 37 H 0.112 0.888 38 H 0.242 0.758 39 H -0.228 1.228 40 H -0.208 1.208 41 H 0.191 0.809 42 H 0.179 0.821 43 H 0.162 0.838 44 H 0.087 0.913 45 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -1.260 -0.744 0.238 1.482 hybrid contribution 0.848 0.266 -0.585 1.064 sum -0.412 -0.478 -0.347 0.720 Atomic orbital electron populations 1.22447 0.95135 1.02576 1.02996 1.21679 0.93569 0.93466 0.85350 1.21791 1.01725 0.93151 1.02970 1.22452 1.02003 1.01067 0.97895 1.88010 1.74163 1.24026 1.43756 1.23650 0.95755 0.82447 0.97848 0.88280 1.23199 0.96110 0.97149 0.99417 1.22249 0.98603 0.97773 0.93475 0.87778 1.22979 0.87375 0.95683 0.94726 1.86156 1.43914 1.70205 1.22212 1.18812 0.93301 0.93786 0.83557 1.20016 0.96792 1.03544 0.95847 1.25131 0.92852 0.96902 1.02602 1.86514 1.68253 1.44063 1.37211 0.93973 0.76530 0.75272 0.85122 1.21085 0.98334 0.97098 0.90947 1.21250 0.92486 1.00301 1.02316 1.20876 0.90682 0.99755 0.91443 1.98401 1.43776 1.92456 1.69036 1.21236 1.00565 1.07580 0.93766 1.23552 0.99020 0.96392 0.99364 0.92480 0.90519 0.92290 0.92179 0.89726 0.92411 0.91935 0.90396 0.92046 0.89058 0.89326 0.91351 0.90766 0.88807 0.75797 1.22762 1.20835 0.80906 0.82146 0.83828 0.91345 0.90082 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.01 8.38 71.98 0.60 0.59 16 2 C 0.10 0.12 1.11 -10.79 -0.01 0.11 16 3 C -0.14 -0.03 8.84 71.98 0.64 0.60 16 4 C -0.18 0.18 8.38 71.98 0.60 0.79 16 5 O -0.38 -1.72 10.00 -148.98 -1.49 -3.21 16 6 C 0.06 0.06 2.82 31.12 0.09 0.15 16 7 H 0.10 -0.07 5.54 -2.39 -0.01 -0.09 16 8 C -0.12 0.11 7.47 31.12 0.23 0.34 16 9 C -0.10 -0.01 4.01 -10.27 -0.04 -0.05 16 10 H 0.10 0.01 8.14 -2.39 -0.02 -0.01 16 11 C 0.07 0.07 4.58 71.98 0.33 0.40 16 12 O -0.31 -1.72 9.46 -92.46 -0.87 -2.59 16 13 C 0.15 0.65 6.66 22.50 0.15 0.80 16 14 C -0.16 -0.23 5.27 -19.77 -0.10 -0.34 16 15 C -0.07 -0.09 2.38 71.24 0.17 0.08 16 16 O -0.55 -1.37 12.88 -148.98 -1.92 -3.29 16 17 Si 0.79 -1.98 29.92 68.60 2.05 0.07 16 18 C -0.06 0.17 8.65 22.25 0.19 0.36 16 19 C -0.14 0.23 9.83 22.31 0.22 0.45 16 20 C 0.00 0.00 6.32 22.31 0.14 0.14 16 21 Cl -0.07 -0.15 28.95 -2.72 -0.08 -0.23 16 22 C -0.21 -0.62 8.82 22.39 0.20 -0.42 16 23 C -0.15 -0.27 7.46 31.12 0.23 -0.04 16 24 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 25 H 0.08 -0.16 8.14 -2.39 -0.02 -0.18 16 26 H 0.06 0.00 7.02 -2.39 -0.02 -0.02 16 27 H 0.06 0.06 8.14 -2.39 -0.02 0.04 16 28 H 0.08 -0.23 8.14 -2.39 -0.02 -0.25 16 29 H 0.06 0.08 8.14 -2.39 -0.02 0.07 16 30 H 0.06 -0.11 6.24 -2.39 -0.01 -0.12 16 31 H 0.08 -0.23 8.14 -2.39 -0.02 -0.25 16 32 H 0.06 0.00 8.14 -2.38 -0.02 -0.02 16 33 H 0.09 -0.02 8.10 -2.39 -0.02 -0.04 16 34 H 0.09 -0.26 8.14 -2.39 -0.02 -0.28 16 35 H 0.07 0.04 7.35 -2.39 -0.02 0.02 16 36 H 0.07 -0.08 7.67 -2.39 -0.02 -0.09 16 37 H 0.09 0.46 7.82 -2.39 -0.02 0.45 16 38 H 0.39 -2.47 8.70 -74.06 -0.64 -3.12 16 39 H -0.30 -1.58 7.11 99.48 0.71 -0.88 16 40 H -0.28 -0.54 7.11 99.48 0.71 0.16 16 41 H 0.17 -1.70 5.13 -2.91 -0.01 -1.71 16 42 H 0.16 -0.94 8.06 -2.91 -0.02 -0.97 16 43 H 0.14 0.16 6.30 -2.91 -0.02 0.14 16 44 H 0.07 0.18 8.14 -2.39 -0.02 0.16 16 45 H 0.08 0.31 7.90 -2.38 -0.02 0.29 16 Total: 0.00 -13.63 373.67 1.71 -11.92 By element: Atomic # 1 Polarization: -7.02 SS G_CDS: 0.38 Total: -6.63 kcal Atomic # 6 Polarization: 0.34 SS G_CDS: 3.64 Total: 3.97 kcal Atomic # 8 Polarization: -4.81 SS G_CDS: -4.28 Total: -9.09 kcal Atomic # 14 Polarization: -1.98 SS G_CDS: 2.05 Total: 0.07 kcal Atomic # 17 Polarization: -0.15 SS G_CDS: -0.08 Total: -0.23 kcal Total: -13.63 1.71 -11.92 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_13616168_14598384.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.901 kcal (2) G-P(sol) polarization free energy of solvation -13.627 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.528 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.709 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -11.918 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.819 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds