Wall clock time and date at job start Mon Mar 8 2021 15:30:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.42899 * 113.99746 * 2 1 4 4 C 1.53009 * 112.84901 * 65.07957 * 3 2 1 5 5 F 1.39896 * 109.46971 * 54.19487 * 4 3 2 6 6 F 1.39894 * 109.47399 * 174.19594 * 4 3 2 7 7 F 1.39904 * 109.46775 * 294.19658 * 4 3 2 8 8 C 1.53781 * 113.61728 * 293.88271 * 3 2 1 9 9 C 1.53775 * 87.08124 * 270.87974 * 8 3 2 10 10 H 1.08997 * 113.61831 * 220.01865 * 9 8 3 11 11 C 1.53003 * 113.61305 * 89.19991 * 9 8 3 12 12 O 1.42901 * 109.47293 * 175.00045 * 11 9 8 13 13 C 1.35892 * 117.00013 * 179.97438 * 12 11 9 14 14 C 1.39802 * 119.56565 * 180.02562 * 13 12 11 15 15 C 1.50700 * 119.53486 * 359.97438 * 14 13 12 16 16 O 1.42903 * 109.47260 * 75.00500 * 15 14 13 17 17 Si 1.86306 * 109.46953 * 195.00148 * 15 14 13 18 18 C 1.36017 * 120.93084 * 180.02562 * 14 13 12 19 19 C 1.40549 * 119.73091 * 359.97438 * 18 14 13 20 20 C 1.40539 * 121.22423 * 179.97438 * 19 18 14 21 21 C 1.36097 * 119.67005 * 180.02562 * 20 19 18 22 22 C 1.39380 * 120.99949 * 359.97438 * 21 20 19 23 23 C 1.36084 * 120.98560 * 0.02562 * 22 21 20 24 24 C 1.40577 * 119.65647 * 359.97438 * 23 22 21 25 25 C 1.36608 * 119.56502 * 359.72944 * 13 12 11 26 26 C 1.53784 * 113.61514 * 196.27053 * 3 2 1 27 27 H 1.08993 * 109.47866 * 293.62813 * 1 2 3 28 28 H 1.09003 * 109.47155 * 173.62982 * 1 2 3 29 29 H 1.09000 * 109.47320 * 53.63478 * 1 2 3 30 30 H 1.08997 * 113.61582 * 25.43672 * 8 3 2 31 31 H 1.09000 * 113.61120 * 156.25180 * 8 3 2 32 32 H 1.09007 * 109.46960 * 295.00142 * 11 9 8 33 33 H 1.08998 * 109.46997 * 55.00161 * 11 9 8 34 34 H 1.08998 * 109.47446 * 314.99853 * 15 14 13 35 35 H 0.96704 * 113.99432 * 300.00098 * 16 15 14 36 36 H 1.48504 * 110.00078 * 298.68150 * 17 15 14 37 37 H 1.48494 * 110.00097 * 60.00118 * 17 15 14 38 38 H 1.08000 * 120.13472 * 179.97438 * 18 14 13 39 39 H 1.07997 * 120.16199 * 0.02562 * 20 19 18 40 40 H 1.08003 * 119.49823 * 180.02562 * 21 20 19 41 41 H 1.07998 * 119.50439 * 180.02562 * 22 21 20 42 42 H 1.08000 * 120.16751 * 180.02562 * 23 22 21 43 43 H 1.07995 * 120.19005 * 359.97438 * 25 13 12 44 44 H 1.09002 * 113.61413 * 203.66404 * 26 3 2 45 45 H 1.08995 * 113.61494 * 334.57504 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0101 1.3055 0.0000 4 6 1.7090 2.0899 1.2787 5 9 2.0989 1.3361 2.3909 6 9 2.4156 3.2971 1.2626 7 9 0.3370 2.3535 1.3518 8 6 1.7395 2.1003 -1.2884 9 6 3.0238 1.4706 -1.8531 10 1 3.6289 2.1631 -2.4382 11 6 2.7902 0.1372 -2.5661 12 8 4.0138 -0.3094 -3.1539 13 6 3.9796 -1.4879 -3.8296 14 6 5.1465 -1.9756 -4.4254 15 6 6.4252 -1.1866 -4.3100 16 8 6.9564 -1.3306 -2.9912 17 14 7.6615 -1.8226 -5.5502 18 6 5.1437 -3.1517 -5.1087 19 6 3.9533 -3.8907 -5.2194 20 6 3.9146 -5.1092 -5.9185 21 6 2.7444 -5.7986 -6.0064 22 6 1.5800 -5.3150 -5.4123 23 6 1.5792 -4.1391 -4.7275 24 6 2.7689 -3.3987 -4.6151 25 6 2.8068 -2.1835 -3.9125 26 6 3.4964 1.3182 -0.3948 27 1 -0.3634 0.4118 0.9414 28 1 -0.3633 -1.0213 -0.1140 29 1 -0.3634 0.6093 -0.8275 30 1 0.8347 1.7901 -1.8109 31 1 1.8028 3.1804 -1.1564 32 1 2.4413 -0.6034 -1.8464 33 1 2.0395 0.2685 -3.3454 34 1 6.2218 -0.1340 -4.5069 35 1 6.3647 -1.0189 -2.2927 36 1 7.9715 -3.2483 -5.2730 37 1 7.1210 -1.6785 -6.9257 38 1 6.0525 -3.5162 -5.5643 39 1 4.8090 -5.4967 -6.3836 40 1 2.7179 -6.7350 -6.5439 41 1 0.6647 -5.8821 -5.4968 42 1 0.6694 -3.7769 -4.2720 43 1 1.9131 -1.7992 -3.4437 44 1 4.0405 2.1849 -0.0194 45 1 4.0088 0.3769 -0.1965 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_13906094_17321600.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 15:30:31 Heat of formation + Delta-G solvation = -182.723955 kcal Electronic energy + Delta-G solvation = -34687.311998 eV Core-core repulsion = 29609.125574 eV Total energy + Delta-G solvation = -5078.186425 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.127 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -51.22475 -48.77863 -48.65219 -42.10888 -41.45882 -39.82966 -38.13697 -37.22330 -36.26095 -33.71912 -31.82733 -30.78786 -29.76694 -28.39142 -27.49881 -26.97851 -26.75509 -24.22326 -23.58887 -22.95967 -22.84454 -20.72826 -19.95091 -19.54612 -19.38597 -19.24423 -18.57051 -18.20806 -17.52505 -17.35356 -16.97386 -16.64974 -16.35027 -16.26169 -15.95484 -15.85324 -15.59187 -15.53144 -15.33708 -15.25743 -15.12149 -14.91719 -14.84737 -14.71563 -14.50413 -14.29542 -14.18798 -13.96675 -13.86090 -13.61702 -13.44343 -13.25872 -12.94357 -12.74708 -12.42473 -12.28368 -12.17758 -12.10834 -12.01157 -11.81511 -11.54547 -11.15769 -10.98036 -10.94552 -10.86282 -9.33715 -8.79724 -4.79583 -0.54848 -0.01526 0.99634 1.39963 1.49235 1.66890 1.83919 1.90185 1.93006 1.98407 2.47443 2.55893 2.77777 3.05555 3.12895 3.27978 3.36678 3.44858 3.54404 3.57923 3.87069 3.89716 3.95054 3.96834 4.02639 4.06794 4.10199 4.12170 4.17791 4.21719 4.24687 4.28045 4.35203 4.40900 4.48395 4.48657 4.54522 4.58291 4.62872 4.75883 4.83401 4.93172 4.97776 5.15245 5.24689 5.52218 5.53233 5.53818 5.58148 5.91892 6.24879 6.63776 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.006 3.994 2 O -0.333 6.333 3 C 0.039 3.961 4 C 0.437 3.563 5 F -0.174 7.174 6 F -0.175 7.175 7 F -0.182 7.182 8 C -0.144 4.144 9 C -0.097 4.097 10 H 0.107 0.893 11 C 0.069 3.931 12 O -0.311 6.311 13 C 0.150 3.850 14 C -0.124 4.124 15 C -0.076 4.076 16 O -0.534 6.534 17 Si 0.743 3.257 18 C -0.070 4.070 19 C -0.078 4.078 20 C -0.095 4.095 21 C -0.125 4.125 22 C -0.102 4.102 23 C -0.118 4.118 24 C -0.011 4.011 25 C -0.206 4.206 26 C -0.110 4.110 27 H 0.059 0.941 28 H 0.101 0.899 29 H 0.055 0.945 30 H 0.094 0.906 31 H 0.114 0.886 32 H 0.086 0.914 33 H 0.067 0.933 34 H 0.077 0.923 35 H 0.367 0.633 36 H -0.252 1.252 37 H -0.249 1.249 38 H 0.134 0.866 39 H 0.127 0.873 40 H 0.126 0.874 41 H 0.126 0.874 42 H 0.127 0.873 43 H 0.135 0.865 44 H 0.116 0.884 45 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.551 1.457 -2.358 3.176 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.089 4.089 2 O -0.251 6.251 3 C -0.003 4.003 4 C 0.383 3.617 5 F -0.155 7.155 6 F -0.156 7.156 7 F -0.163 7.163 8 C -0.181 4.181 9 C -0.116 4.116 10 H 0.125 0.875 11 C -0.006 4.006 12 O -0.225 6.225 13 C 0.104 3.896 14 C -0.125 4.125 15 C -0.185 4.185 16 O -0.339 6.339 17 Si 0.642 3.358 18 C -0.087 4.087 19 C -0.078 4.078 20 C -0.113 4.113 21 C -0.143 4.143 22 C -0.120 4.120 23 C -0.136 4.136 24 C -0.011 4.011 25 C -0.224 4.224 26 C -0.147 4.147 27 H 0.077 0.923 28 H 0.119 0.881 29 H 0.074 0.926 30 H 0.112 0.888 31 H 0.133 0.867 32 H 0.104 0.896 33 H 0.086 0.914 34 H 0.095 0.905 35 H 0.214 0.786 36 H -0.177 1.177 37 H -0.173 1.173 38 H 0.151 0.849 39 H 0.145 0.855 40 H 0.144 0.856 41 H 0.144 0.856 42 H 0.145 0.855 43 H 0.153 0.847 44 H 0.134 0.866 45 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges -0.649 0.619 -3.235 3.357 hybrid contribution -2.432 0.270 1.120 2.691 sum -3.081 0.889 -2.115 3.841 Atomic orbital electron populations 1.23222 0.79436 1.04265 1.01994 1.88085 1.21214 1.21916 1.93876 1.24030 0.99965 0.86248 0.90070 1.21199 0.74356 0.78804 0.87368 1.93225 1.90629 1.75764 1.55866 1.93187 1.78590 1.47133 1.96697 1.93177 1.31991 1.94305 1.96854 1.23610 0.99483 1.01345 0.93703 1.22107 0.97571 0.96310 0.95589 0.87460 1.22779 0.85131 0.95712 0.96943 1.85961 1.35432 1.35002 1.66087 1.18321 0.93186 0.85500 0.92592 1.19464 0.94639 0.96939 1.01414 1.25248 0.98398 1.02058 0.92750 1.86717 1.45610 1.87250 1.14310 0.93090 0.86769 0.81546 0.74406 1.20793 0.97383 0.93220 0.97319 1.17969 0.92959 0.96165 1.00700 1.21044 0.98658 0.93659 0.97898 1.20879 0.92725 1.00388 1.00338 1.20939 0.98453 0.95939 0.96622 1.20987 0.96904 0.95431 1.00284 1.17792 0.93229 0.93989 0.96077 1.21015 0.97830 0.97272 1.06327 1.23289 0.90713 1.05798 0.94941 0.92281 0.88106 0.92640 0.88774 0.86729 0.89596 0.91442 0.90518 0.78585 1.17650 1.17320 0.84882 0.85470 0.85631 0.85648 0.85482 0.84693 0.86577 0.88145 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.18 101.05 1.03 1.02 16 2 O -0.33 0.15 8.52 -35.23 -0.30 -0.15 16 3 C 0.04 -0.05 0.79 -89.80 -0.07 -0.12 16 4 C 0.44 0.24 2.61 37.16 0.10 0.34 16 5 F -0.17 -0.42 17.26 2.25 0.04 -0.38 16 6 F -0.17 -0.10 15.72 2.25 0.04 -0.07 16 7 F -0.18 -0.17 14.85 2.25 0.03 -0.14 16 8 C -0.14 0.45 6.63 -25.92 -0.17 0.28 16 9 C -0.10 0.27 4.20 -89.66 -0.38 -0.11 16 10 H 0.11 -0.35 8.14 -51.93 -0.42 -0.77 16 11 C 0.07 -0.11 4.32 37.16 0.16 0.05 16 12 O -0.31 -0.15 8.93 -19.40 -0.17 -0.32 16 13 C 0.15 0.30 6.57 -39.59 -0.26 0.04 16 14 C -0.12 -0.33 5.26 -104.84 -0.55 -0.88 16 15 C -0.08 -0.10 2.31 36.01 0.08 -0.02 16 16 O -0.53 -1.09 12.65 -35.23 -0.45 -1.54 16 17 Si 0.74 0.23 30.37 -169.99 -5.16 -4.93 16 18 C -0.07 -0.21 8.36 -39.51 -0.33 -0.54 16 19 C -0.08 -0.25 5.74 -106.81 -0.61 -0.86 16 20 C -0.09 -0.17 9.77 -39.48 -0.39 -0.56 16 21 C -0.13 -0.12 9.95 -39.93 -0.40 -0.51 16 22 C -0.10 -0.07 9.95 -39.93 -0.40 -0.47 16 23 C -0.12 -0.14 9.77 -39.47 -0.39 -0.53 16 24 C -0.01 -0.03 5.74 -106.84 -0.61 -0.64 16 25 C -0.21 -0.35 8.74 -39.35 -0.34 -0.69 16 26 C -0.11 0.24 6.94 -25.77 -0.18 0.06 16 27 H 0.06 -0.07 6.30 -51.93 -0.33 -0.40 16 28 H 0.10 -0.33 8.14 -51.93 -0.42 -0.75 16 29 H 0.06 -0.19 6.57 -51.93 -0.34 -0.53 16 30 H 0.09 -0.37 6.68 -51.93 -0.35 -0.72 16 31 H 0.11 -0.43 7.69 -51.93 -0.40 -0.83 16 32 H 0.09 -0.09 5.60 -51.92 -0.29 -0.38 16 33 H 0.07 -0.15 7.64 -51.93 -0.40 -0.55 16 34 H 0.08 0.03 7.80 -51.93 -0.40 -0.37 16 35 H 0.37 0.06 8.54 45.56 0.39 0.45 16 36 H -0.25 -0.63 6.80 56.52 0.38 -0.25 16 37 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 38 H 0.13 0.29 4.82 -52.49 -0.25 0.04 16 39 H 0.13 0.00 8.06 -52.49 -0.42 -0.42 16 40 H 0.13 -0.14 8.06 -52.48 -0.42 -0.56 16 41 H 0.13 -0.18 8.06 -52.49 -0.42 -0.61 16 42 H 0.13 -0.12 8.06 -52.49 -0.42 -0.54 16 43 H 0.14 -0.05 6.19 -52.49 -0.32 -0.38 16 44 H 0.12 -0.35 7.30 -51.93 -0.38 -0.73 16 45 H 0.10 -0.16 8.11 -51.93 -0.42 -0.58 16 LS Contribution 371.76 15.07 5.60 5.60 Total: 0.00 -5.65 371.76 -9.33 -14.98 By element: Atomic # 1 Polarization: -3.65 SS G_CDS: -5.25 Total: -8.90 kcal Atomic # 6 Polarization: -0.44 SS G_CDS: -3.71 Total: -4.15 kcal Atomic # 8 Polarization: -1.09 SS G_CDS: -0.92 Total: -2.01 kcal Atomic # 9 Polarization: -0.70 SS G_CDS: 0.11 Total: -0.59 kcal Atomic # 14 Polarization: 0.23 SS G_CDS: -5.16 Total: -4.93 kcal Total LS contribution 5.60 Total: 5.60 kcal Total: -5.65 -9.33 -14.98 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_13906094_17321600.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -167.749 kcal (2) G-P(sol) polarization free energy of solvation -5.650 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -173.398 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.326 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.975 kcal (6) G-S(sol) free energy of system = (1) + (5) -182.724 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds