Wall clock time and date at job start Mon Mar 8 2021 14:36:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.42900 * 113.99574 * 2 1 4 4 C 1.53001 * 112.84970 * 75.77200 * 3 2 1 5 5 F 1.39907 * 109.46984 * 283.85124 * 4 3 2 6 6 F 1.39901 * 109.47150 * 43.85033 * 4 3 2 7 7 F 1.39898 * 109.47169 * 163.85236 * 4 3 2 8 8 C 1.53785 * 113.61789 * 304.57453 * 3 2 1 9 9 C 1.53780 * 87.07988 * 270.88507 * 8 3 2 10 10 H 1.09001 * 113.61608 * 219.93614 * 9 8 3 11 11 C 1.52994 * 113.61537 * 89.11350 * 9 8 3 12 12 O 1.42908 * 109.47232 * 176.52962 * 11 9 8 13 13 C 1.35898 * 117.00163 * 179.97438 * 12 11 9 14 14 C 1.38765 * 120.01993 * 179.97438 * 13 12 11 15 15 C 1.50701 * 119.95279 * 359.96054 * 14 13 12 16 16 O 1.42902 * 109.47476 * 285.02126 * 15 14 13 17 17 Si 1.86300 * 109.47353 * 165.02035 * 15 14 13 18 18 C 1.38218 * 120.09685 * 179.97438 * 14 13 12 19 19 C 1.38114 * 120.12530 * 359.97438 * 18 14 13 20 20 C 1.38973 * 120.03507 * 0.02562 * 19 18 14 21 21 N 1.39672 * 120.04479 * 179.97438 * 20 19 18 22 22 C 1.46499 * 119.99703 * 185.88770 * 21 20 19 23 23 C 1.46499 * 120.00203 * 5.88115 * 21 20 19 24 24 C 1.52999 * 109.47272 * 235.37330 * 23 21 20 25 25 C 1.52999 * 109.46947 * 115.37124 * 23 21 20 26 26 C 1.38620 * 120.01700 * 0.23850 * 13 12 11 27 27 C 1.53782 * 87.17435 * 334.52455 * 9 8 3 28 28 H 1.08999 * 109.47132 * 305.13552 * 1 2 3 29 29 H 1.09001 * 109.47590 * 65.14552 * 1 2 3 30 30 H 1.09002 * 109.46789 * 185.14411 * 1 2 3 31 31 H 1.08995 * 113.61369 * 156.33555 * 8 3 2 32 32 H 1.08998 * 113.61143 * 25.43432 * 8 3 2 33 33 H 1.09000 * 109.47617 * 56.53076 * 11 9 8 34 34 H 1.09005 * 109.47386 * 296.52737 * 11 9 8 35 35 H 1.08996 * 109.47184 * 45.02045 * 15 14 13 36 36 H 0.96692 * 114.00539 * 179.97438 * 16 15 14 37 37 H 1.48497 * 109.99958 * 298.68342 * 17 15 14 38 38 H 1.48506 * 109.99690 * 59.99928 * 17 15 14 39 39 H 1.07996 * 119.94201 * 180.02562 * 18 14 13 40 40 H 1.08004 * 119.98290 * 180.02562 * 19 18 14 41 41 H 1.09005 * 109.46953 * 269.99391 * 22 21 20 42 42 H 1.08993 * 109.47735 * 29.99412 * 22 21 20 43 43 H 1.09002 * 109.47051 * 150.00313 * 22 21 20 44 44 H 1.09006 * 109.47137 * 355.37190 * 23 21 20 45 45 H 1.08996 * 109.46939 * 299.99440 * 24 23 21 46 46 H 1.08996 * 109.47526 * 59.99825 * 24 23 21 47 47 H 1.09001 * 109.46884 * 180.02562 * 24 23 21 48 48 H 1.08996 * 109.47139 * 60.00075 * 25 23 21 49 49 H 1.09005 * 109.47273 * 180.02562 * 25 23 21 50 50 H 1.09007 * 109.47106 * 299.99924 * 25 23 21 51 51 H 1.08001 * 120.06677 * 0.02562 * 26 13 12 52 52 H 1.08999 * 113.61967 * 140.02398 * 27 9 8 53 53 H 1.09005 * 113.61209 * 270.92923 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0101 1.3055 0.0000 4 6 1.9351 1.9892 1.3667 5 9 0.6323 2.4488 1.5873 6 9 2.2821 1.0735 2.3659 7 9 2.8224 3.0704 1.3965 8 6 1.5302 2.1935 -1.1602 9 6 2.6960 1.6164 -1.9803 10 1 3.1968 2.3547 -2.6067 11 6 2.3370 0.3380 -2.7403 12 8 3.4528 -0.0749 -3.5319 13 6 3.2991 -1.2029 -4.2740 14 6 4.3426 -1.6603 -5.0662 15 6 5.6460 -0.9048 -5.1036 16 8 5.4869 0.2813 -5.8846 17 14 6.9643 -1.9780 -5.8657 18 6 4.1882 -2.8077 -5.8212 19 6 2.9953 -3.5031 -5.7894 20 6 1.9467 -3.0498 -4.9980 21 7 0.7401 -3.7526 -4.9661 22 6 -0.4062 -3.2069 -4.2352 23 6 0.6208 -5.0353 -5.6637 24 6 -0.5556 -4.9773 -6.6403 25 6 0.3825 -6.1503 -4.6436 26 6 2.0980 -1.8942 -4.2443 27 6 3.4092 1.3581 -0.6426 28 1 -0.3633 0.5914 0.8404 29 1 -0.3634 0.4319 -0.9325 30 1 -0.3633 -1.0236 0.0921 31 1 1.6232 3.2610 -0.9603 32 1 0.5479 1.9177 -1.5437 33 1 1.4821 0.5288 -3.3890 34 1 2.0850 -0.4488 -2.0292 35 1 5.9388 -0.6350 -4.0889 36 1 6.2881 0.8184 -5.9518 37 1 7.1618 -3.1998 -5.0451 38 1 6.5770 -2.3527 -7.2495 39 1 5.0021 -3.1617 -6.4365 40 1 2.8773 -4.3996 -6.3800 41 1 -0.3826 -3.5620 -3.2049 42 1 -0.3588 -2.1180 -4.2454 43 1 -1.3303 -3.5349 -4.7113 44 1 1.5401 -5.2365 -6.2139 45 1 -1.4748 -4.7761 -6.0901 46 1 -0.3858 -4.1829 -7.3670 47 1 -0.6445 -5.9318 -7.1590 48 1 -0.5367 -5.9491 -4.0935 49 1 0.2941 -7.1048 -5.1626 50 1 1.2207 -6.1916 -3.9479 51 1 1.2831 -1.5371 -3.6320 52 1 3.9429 0.4083 -0.6085 53 1 4.0150 2.1977 -0.3016 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_15096552_17321600.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 14:36:36 Heat of formation + Delta-G solvation = -179.817810 kcal Electronic energy + Delta-G solvation = -39296.311968 eV Core-core repulsion = 33915.353598 eV Total energy + Delta-G solvation = -5380.958370 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.185 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -51.24841 -48.78704 -48.72616 -41.86702 -41.17998 -39.54457 -38.18301 -37.11255 -36.83782 -33.94382 -31.71629 -31.05130 -30.36958 -28.32829 -28.21165 -27.97422 -27.29613 -26.67409 -25.34370 -23.84735 -23.27629 -22.41819 -20.91613 -20.48672 -19.82605 -19.55277 -19.30239 -19.18822 -18.26898 -17.58143 -17.42776 -17.28566 -16.78550 -16.54906 -16.47222 -15.99191 -15.79550 -15.71406 -15.69125 -15.62357 -15.55603 -15.26957 -15.16298 -14.94718 -14.89907 -14.81083 -14.68154 -14.31780 -14.14043 -14.00372 -13.96164 -13.81594 -13.42366 -13.35722 -13.22451 -13.11490 -13.03607 -12.91579 -12.71984 -12.46382 -12.32587 -12.29388 -12.09880 -12.02034 -11.87840 -11.75494 -11.61059 -11.56838 -10.83200 -10.69664 -10.12592 -9.46718 -8.33249 -4.91824 0.27780 0.45131 1.37850 1.52652 1.67159 1.95547 2.00504 2.06204 2.11005 2.55547 2.63029 2.64165 2.89269 3.30245 3.37023 3.48404 3.54929 3.67754 3.74756 3.76782 4.01266 4.02103 4.07447 4.15880 4.19224 4.22488 4.23952 4.27086 4.31697 4.37330 4.37471 4.47642 4.49279 4.50626 4.58041 4.62084 4.64874 4.66761 4.68341 4.74394 4.79171 4.79873 4.82568 4.87697 4.89790 5.02646 5.08497 5.16517 5.23059 5.25982 5.36827 5.57383 5.70422 6.20354 6.28121 6.48337 7.02991 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.003 3.997 2 O -0.348 6.348 3 C 0.036 3.964 4 C 0.434 3.566 5 F -0.185 7.185 6 F -0.189 7.189 7 F -0.176 7.176 8 C -0.134 4.134 9 C -0.092 4.092 10 H 0.113 0.887 11 C 0.067 3.933 12 O -0.308 6.308 13 C 0.194 3.806 14 C -0.193 4.193 15 C -0.057 4.057 16 O -0.563 6.563 17 Si 0.769 3.231 18 C -0.053 4.053 19 C -0.242 4.242 20 C 0.256 3.744 21 N -0.622 5.622 22 C 0.085 3.915 23 C 0.133 3.867 24 C -0.160 4.160 25 C -0.159 4.159 26 C -0.290 4.290 27 C -0.113 4.113 28 H 0.049 0.951 29 H 0.072 0.928 30 H 0.109 0.891 31 H 0.125 0.875 32 H 0.108 0.892 33 H 0.072 0.928 34 H 0.079 0.921 35 H 0.072 0.928 36 H 0.395 0.605 37 H -0.293 1.293 38 H -0.289 1.289 39 H 0.123 0.877 40 H 0.137 0.863 41 H 0.053 0.947 42 H 0.069 0.931 43 H 0.084 0.916 44 H 0.088 0.912 45 H 0.066 0.934 46 H 0.050 0.950 47 H 0.079 0.921 48 H 0.062 0.938 49 H 0.078 0.922 50 H 0.046 0.954 51 H 0.145 0.855 52 H 0.087 0.913 53 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.142 0.411 -1.604 2.707 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 O -0.266 6.266 3 C -0.006 4.006 4 C 0.380 3.620 5 F -0.166 7.166 6 F -0.170 7.170 7 F -0.157 7.157 8 C -0.171 4.171 9 C -0.111 4.111 10 H 0.131 0.869 11 C -0.008 4.008 12 O -0.221 6.221 13 C 0.147 3.853 14 C -0.196 4.196 15 C -0.167 4.167 16 O -0.372 6.372 17 Si 0.675 3.325 18 C -0.071 4.071 19 C -0.264 4.264 20 C 0.151 3.849 21 N -0.332 5.332 22 C -0.057 4.057 23 C 0.030 3.970 24 C -0.218 4.218 25 C -0.217 4.217 26 C -0.314 4.314 27 C -0.150 4.150 28 H 0.068 0.932 29 H 0.091 0.909 30 H 0.128 0.872 31 H 0.143 0.857 32 H 0.126 0.874 33 H 0.091 0.909 34 H 0.097 0.903 35 H 0.090 0.910 36 H 0.245 0.755 37 H -0.220 1.220 38 H -0.217 1.217 39 H 0.140 0.860 40 H 0.155 0.845 41 H 0.072 0.928 42 H 0.088 0.912 43 H 0.102 0.898 44 H 0.106 0.894 45 H 0.085 0.915 46 H 0.069 0.931 47 H 0.098 0.902 48 H 0.081 0.919 49 H 0.097 0.903 50 H 0.065 0.935 51 H 0.163 0.837 52 H 0.106 0.894 53 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges -2.501 -0.713 -1.919 3.232 hybrid contribution -1.008 0.048 0.888 1.344 sum -3.509 -0.665 -1.031 3.717 Atomic orbital electron populations 1.23307 0.78702 1.05056 1.02192 1.88084 1.22201 1.22510 1.93762 1.24192 1.01491 0.86965 0.87968 1.21505 0.73489 0.77456 0.89556 1.93172 1.37969 1.89641 1.95853 1.93184 1.91970 1.66838 1.65015 1.93171 1.68821 1.56917 1.96831 1.23647 1.00522 1.00934 0.92001 1.22009 0.97405 0.96624 0.95017 0.86894 1.22858 0.87794 0.96774 0.93342 1.86057 1.40629 1.39069 1.56328 1.18494 0.92447 0.85082 0.89323 1.18700 0.96373 0.99595 1.04927 1.24525 1.00001 0.92817 0.99320 1.86473 1.41450 1.36289 1.72971 0.94652 0.83338 0.78465 0.76050 1.20645 0.97005 0.93713 0.95771 1.20693 0.93822 1.04920 1.06953 1.17644 0.86175 0.89925 0.91145 1.46803 1.09243 1.21354 1.55769 1.21770 0.88389 0.99367 0.96212 1.21233 1.00227 0.82346 0.93220 1.22146 0.97922 1.02893 0.98811 1.22146 1.01942 0.98383 0.99216 1.20833 0.99165 1.00704 1.10671 1.23360 0.92186 1.05346 0.94086 0.93197 0.90927 0.87225 0.85672 0.87409 0.90940 0.90320 0.90979 0.75457 1.22040 1.21713 0.85979 0.84543 0.92803 0.91213 0.89779 0.89368 0.91484 0.93070 0.90231 0.91872 0.90332 0.93504 0.83712 0.89416 0.85647 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 -0.01 10.48 113.37 1.19 1.18 16 2 O -0.35 -0.21 8.34 -148.98 -1.24 -1.45 16 3 C 0.04 -0.03 0.85 -10.17 -0.01 -0.04 16 4 C 0.43 1.15 2.74 71.98 0.20 1.35 16 5 F -0.18 -0.54 15.43 44.97 0.69 0.15 16 6 F -0.19 -1.32 17.10 44.97 0.77 -0.55 16 7 F -0.18 -0.44 15.83 44.97 0.71 0.27 16 8 C -0.13 0.74 6.45 31.12 0.20 0.94 16 9 C -0.09 0.30 4.19 -10.27 -0.04 0.26 16 10 H 0.11 -0.45 8.14 -2.39 -0.02 -0.47 16 11 C 0.07 0.00 4.34 71.98 0.31 0.31 16 12 O -0.31 -1.97 9.46 -92.40 -0.87 -2.84 16 13 C 0.19 1.69 6.66 22.49 0.15 1.84 16 14 C -0.19 -1.89 5.31 -19.74 -0.10 -2.00 16 15 C -0.06 -0.29 2.36 71.24 0.17 -0.12 16 16 O -0.56 -2.69 12.86 -148.98 -1.92 -4.60 16 17 Si 0.77 1.39 30.19 68.60 2.07 3.46 16 18 C -0.05 -0.50 8.65 22.24 0.19 -0.31 16 19 C -0.24 -1.80 9.31 22.42 0.21 -1.59 16 20 C 0.26 1.57 6.53 38.20 0.25 1.82 16 21 N -0.62 -0.95 2.90 -698.13 -2.02 -2.98 16 22 C 0.08 -0.25 9.30 127.77 1.19 0.94 16 23 C 0.13 -0.11 3.20 44.99 0.14 0.03 16 24 C -0.16 0.50 9.08 71.98 0.65 1.15 16 25 C -0.16 0.35 9.26 71.98 0.67 1.02 16 26 C -0.29 -1.75 8.15 22.49 0.18 -1.57 16 27 C -0.11 0.20 6.92 31.21 0.22 0.42 16 28 H 0.05 -0.14 6.40 -2.39 -0.02 -0.15 16 29 H 0.07 -0.59 6.48 -2.39 -0.02 -0.61 16 30 H 0.11 -0.70 8.14 -2.39 -0.02 -0.72 16 31 H 0.13 -0.94 8.05 -2.39 -0.02 -0.96 16 32 H 0.11 -0.87 6.24 -2.39 -0.01 -0.89 16 33 H 0.07 -0.14 7.65 -2.39 -0.02 -0.16 16 34 H 0.08 0.06 5.61 -2.38 -0.01 0.04 16 35 H 0.07 0.25 7.82 -2.39 -0.02 0.24 16 36 H 0.40 -2.32 8.74 -74.06 -0.65 -2.97 16 37 H -0.29 -2.22 7.11 99.48 0.71 -1.51 16 38 H -0.29 -2.21 6.75 99.48 0.67 -1.54 16 39 H 0.12 1.02 4.89 -2.91 -0.01 1.01 16 40 H 0.14 0.56 5.74 -2.91 -0.02 0.55 16 41 H 0.05 -0.19 8.14 -2.38 -0.02 -0.21 16 42 H 0.07 -0.25 6.45 -2.39 -0.02 -0.26 16 43 H 0.08 -0.46 6.19 -2.39 -0.01 -0.47 16 44 H 0.09 -0.01 5.31 -2.38 -0.01 -0.02 16 45 H 0.07 -0.29 6.53 -2.39 -0.02 -0.30 16 46 H 0.05 -0.03 8.14 -2.39 -0.02 -0.05 16 47 H 0.08 -0.39 8.14 -2.39 -0.02 -0.41 16 48 H 0.06 -0.19 7.79 -2.39 -0.02 -0.20 16 49 H 0.08 -0.33 8.14 -2.38 -0.02 -0.35 16 50 H 0.05 0.03 8.14 -2.38 -0.02 0.01 16 51 H 0.15 0.26 4.54 -2.91 -0.01 0.25 16 52 H 0.09 0.06 8.10 -2.39 -0.02 0.04 16 53 H 0.13 -0.49 7.03 -2.38 -0.02 -0.51 16 Total: 0.00 -17.85 416.27 4.28 -13.57 By element: Atomic # 1 Polarization: -10.98 SS G_CDS: 0.32 Total: -10.66 kcal Atomic # 6 Polarization: -0.13 SS G_CDS: 5.76 Total: 5.63 kcal Atomic # 7 Polarization: -0.95 SS G_CDS: -2.02 Total: -2.98 kcal Atomic # 8 Polarization: -4.87 SS G_CDS: -4.03 Total: -8.90 kcal Atomic # 9 Polarization: -2.31 SS G_CDS: 2.17 Total: -0.14 kcal Atomic # 14 Polarization: 1.39 SS G_CDS: 2.07 Total: 3.46 kcal Total: -17.85 4.28 -13.57 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_15096552_17321600.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -166.243 kcal (2) G-P(sol) polarization free energy of solvation -17.851 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -184.094 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.276 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.575 kcal (6) G-S(sol) free energy of system = (1) + (5) -179.818 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds