Wall clock time and date at job start Mon Mar 8 2021 15:26:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.53000 * 109.47174 * 2 1 4 4 C 1.52999 * 109.47503 * 239.99617 * 2 1 3 5 5 Si 1.86303 * 109.47258 * 119.99810 * 2 1 3 6 6 C 1.86308 * 109.47076 * 299.99993 * 5 2 1 7 7 C 1.86296 * 109.47040 * 180.02562 * 5 2 1 8 8 O 1.63096 * 109.47337 * 59.99942 * 5 2 1 9 9 C 1.42898 * 114.00209 * 179.97438 * 8 5 2 10 10 C 1.53001 * 109.47145 * 179.97438 * 9 8 5 11 11 C 1.53000 * 109.46886 * 179.97438 * 10 9 8 12 12 O 1.42903 * 109.46726 * 180.02562 * 11 10 9 13 13 C 1.35917 * 116.99522 * 180.02562 * 12 11 10 14 14 C 1.38640 * 120.04981 * 0.02562 * 13 12 11 15 15 C 1.38400 * 119.93181 * 179.97438 * 14 13 12 16 16 F 1.35103 * 119.98870 * 179.97438 * 15 14 13 17 17 C 1.38461 * 120.02005 * 359.97438 * 15 14 13 18 18 C 1.50709 * 119.95323 * 180.02562 * 17 15 14 19 19 O 1.42904 * 109.46958 * 284.99920 * 18 17 15 20 20 Si 1.86295 * 109.46977 * 165.00354 * 18 17 15 21 21 H 1.48507 * 109.47222 * 299.99796 * 20 18 17 22 22 H 1.48500 * 109.47554 * 59.99751 * 20 18 17 23 23 H 1.48506 * 109.46925 * 180.02562 * 20 18 17 24 24 C 1.38257 * 120.09321 * 0.02852 * 17 15 14 25 25 C 1.38198 * 120.07202 * 359.73854 * 24 17 15 26 26 Br 1.89091 * 120.01600 * 180.25936 * 25 24 17 27 27 H 1.08998 * 109.46855 * 300.00219 * 1 2 3 28 28 H 1.08994 * 109.46913 * 60.00573 * 1 2 3 29 29 H 1.09005 * 109.46550 * 180.02562 * 1 2 3 30 30 H 1.09000 * 109.47503 * 180.02562 * 3 2 1 31 31 H 1.09006 * 109.46847 * 299.99997 * 3 2 1 32 32 H 1.09001 * 109.47185 * 59.99654 * 3 2 1 33 33 H 1.09000 * 109.46985 * 300.00228 * 4 2 1 34 34 H 1.09006 * 109.46759 * 59.99855 * 4 2 1 35 35 H 1.09000 * 109.47380 * 179.97438 * 4 2 1 36 36 H 1.08993 * 109.46878 * 180.02562 * 6 5 2 37 37 H 1.09008 * 109.46916 * 300.00134 * 6 5 2 38 38 H 1.08999 * 109.46987 * 59.99664 * 6 5 2 39 39 H 1.09001 * 109.47243 * 299.99745 * 7 5 2 40 40 H 1.09000 * 109.47509 * 59.99848 * 7 5 2 41 41 H 1.09006 * 109.47013 * 179.97438 * 7 5 2 42 42 H 1.09001 * 109.46621 * 60.00038 * 9 8 5 43 43 H 1.09002 * 109.47259 * 300.00299 * 9 8 5 44 44 H 1.09001 * 109.46652 * 60.00333 * 10 9 8 45 45 H 1.08992 * 109.47514 * 300.00423 * 10 9 8 46 46 H 1.09002 * 109.47398 * 300.00496 * 11 10 9 47 47 H 1.09001 * 109.47194 * 60.00677 * 11 10 9 48 48 H 1.08003 * 120.03347 * 359.95286 * 14 13 12 49 49 H 1.08998 * 109.47099 * 45.00291 * 18 17 15 50 50 H 0.96699 * 113.99514 * 179.97438 * 19 18 17 51 51 H 1.08002 * 119.96671 * 180.02562 * 24 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7213 -1.2492 5 14 2.1511 -0.8782 1.5212 6 6 1.5300 0.0001 3.0424 7 6 4.0140 -0.8775 1.5215 8 8 1.6074 -2.4159 1.5213 9 6 2.0296 -3.1816 2.6516 10 6 1.4637 -4.5992 2.5474 11 6 1.9162 -5.4192 3.7572 12 8 1.3881 -6.7434 3.6596 13 6 1.6978 -7.6067 4.6627 14 6 2.4926 -7.1877 5.7186 15 6 2.8060 -8.0685 6.7390 16 9 3.5809 -7.6616 7.7682 17 6 2.3257 -9.3668 6.7053 18 6 2.6675 -10.3246 7.8176 19 8 4.0232 -10.7539 7.6767 20 14 1.5363 -11.8024 7.7339 21 1 0.1274 -11.3563 7.8803 22 1 1.7066 -12.4827 6.4250 23 1 1.8727 -12.7459 8.8303 24 6 1.5331 -9.7856 5.6528 25 6 1.2138 -8.9078 4.6343 26 35 0.1236 -9.4803 3.1993 27 1 -0.3633 0.5139 0.8900 28 1 -0.3633 0.5137 -0.8900 29 1 -0.3632 -1.0277 0.0005 30 1 3.1300 1.4426 -0.0005 31 1 1.6766 1.9563 -0.8900 32 1 1.6766 1.9564 0.8900 33 1 1.6767 -1.7490 -1.2491 34 1 1.6767 -0.2075 -2.1392 35 1 3.1301 -0.7209 -1.2494 36 1 1.8938 -0.5134 3.9323 37 1 1.8934 1.0279 3.0423 38 1 0.4400 0.0002 3.0423 39 1 4.3777 -1.3911 0.6315 40 1 4.3770 0.1503 1.5217 41 1 4.3774 -1.3909 2.4118 42 1 1.6655 -2.7116 3.5652 43 1 3.1185 -3.2254 2.6746 44 1 1.8274 -5.0693 1.6337 45 1 0.3749 -4.5551 2.5246 46 1 3.0051 -5.4633 3.7796 47 1 1.5528 -4.9492 4.6711 48 1 2.8671 -6.1750 5.7446 49 1 2.5424 -9.8252 8.7784 50 1 4.3126 -11.3734 8.3605 51 1 1.1593 -10.7986 5.6289 RHF calculation, no. of doubly occupied orbitals= 66 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_15096606_18527724.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 15:26:42 Heat of formation + Delta-G solvation = -191.731184 kcal Electronic energy + Delta-G solvation = -29962.703055 eV Core-core repulsion = 25560.376216 eV Total energy + Delta-G solvation = -4402.326838 eV No. of doubly occupied orbitals = 66 Molecular weight (most abundant/longest-lived isotopes) = 422.088 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -50.05593 -41.49440 -39.36581 -38.31054 -37.43019 -36.87758 -33.91768 -33.14001 -32.22811 -30.06441 -29.49908 -29.14672 -27.91002 -27.43169 -27.42996 -26.13405 -24.28548 -22.52695 -22.51973 -20.47480 -19.85809 -18.66101 -18.44245 -17.71363 -17.67146 -17.27308 -16.96812 -16.69621 -16.21572 -16.10398 -16.02426 -15.49841 -15.39325 -15.26131 -14.91995 -14.76641 -14.71497 -14.40458 -14.27865 -14.03399 -13.74118 -13.65353 -13.50156 -13.33709 -13.24961 -13.10984 -13.00087 -12.96794 -12.93030 -12.45012 -12.42101 -12.32549 -12.20517 -12.04824 -11.90636 -11.76253 -11.75246 -11.61968 -11.49754 -11.40727 -11.19247 -10.45758 -10.43821 -10.12414 -10.08178 -9.36826 -0.29332 -0.13780 0.58357 1.00076 1.24857 1.33754 1.40306 1.67320 1.79931 1.85485 1.98495 2.08798 2.39498 2.96420 3.16950 3.37880 3.64067 3.66420 3.68465 3.79732 3.89853 4.01072 4.07506 4.08381 4.10597 4.16359 4.17854 4.25987 4.42975 4.44313 4.59383 4.60205 4.62614 4.65884 4.66684 4.68070 4.77234 4.81921 4.85036 4.90877 4.93825 4.96208 5.06839 5.07055 5.15769 5.30040 5.31602 5.35918 5.37454 5.46193 5.48715 5.54192 5.97099 6.48442 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C -0.375 4.375 3 C -0.137 4.137 4 C -0.134 4.134 5 Si 1.288 2.712 6 C -0.512 4.512 7 C -0.512 4.512 8 O -0.622 6.622 9 C 0.090 3.910 10 C -0.123 4.123 11 C 0.052 3.948 12 O -0.289 6.289 13 C 0.197 3.803 14 C -0.244 4.244 15 C 0.187 3.813 16 F -0.120 7.120 17 C -0.145 4.145 18 C -0.076 4.076 19 O -0.542 6.542 20 Si 0.937 3.063 21 H -0.242 1.242 22 H -0.242 1.242 23 H -0.248 1.248 24 C -0.027 4.027 25 C -0.136 4.136 26 Br -0.019 7.019 27 H 0.054 0.946 28 H 0.053 0.947 29 H 0.060 0.940 30 H 0.056 0.944 31 H 0.056 0.944 32 H 0.056 0.944 33 H 0.060 0.940 34 H 0.053 0.947 35 H 0.054 0.946 36 H 0.066 0.934 37 H 0.074 0.926 38 H 0.073 0.927 39 H 0.073 0.927 40 H 0.074 0.926 41 H 0.066 0.934 42 H 0.059 0.941 43 H 0.059 0.941 44 H 0.088 0.912 45 H 0.088 0.912 46 H 0.072 0.928 47 H 0.071 0.929 48 H 0.153 0.847 49 H 0.080 0.920 50 H 0.383 0.617 51 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.411 0.984 2.415 2.639 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.191 4.191 2 C -0.419 4.419 3 C -0.194 4.194 4 C -0.192 4.192 5 Si 1.420 2.580 6 C -0.613 4.613 7 C -0.613 4.613 8 O -0.582 6.582 9 C 0.014 3.986 10 C -0.160 4.160 11 C -0.023 4.023 12 O -0.201 6.201 13 C 0.148 3.852 14 C -0.264 4.264 15 C 0.167 3.833 16 F -0.099 7.099 17 C -0.147 4.147 18 C -0.186 4.186 19 O -0.349 6.349 20 Si 0.758 3.242 21 H -0.165 1.165 22 H -0.165 1.165 23 H -0.172 1.172 24 C -0.046 4.046 25 C -0.216 4.216 26 Br 0.066 6.934 27 H 0.073 0.927 28 H 0.072 0.928 29 H 0.079 0.921 30 H 0.075 0.925 31 H 0.075 0.925 32 H 0.075 0.925 33 H 0.079 0.921 34 H 0.072 0.928 35 H 0.073 0.927 36 H 0.085 0.915 37 H 0.093 0.907 38 H 0.092 0.908 39 H 0.092 0.908 40 H 0.093 0.907 41 H 0.085 0.915 42 H 0.077 0.923 43 H 0.077 0.923 44 H 0.107 0.893 45 H 0.107 0.893 46 H 0.090 0.910 47 H 0.090 0.910 48 H 0.171 0.829 49 H 0.098 0.902 50 H 0.231 0.769 51 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -0.829 0.264 1.022 1.342 hybrid contribution 1.176 0.952 1.281 1.983 sum 0.348 1.216 2.303 2.628 Atomic orbital electron populations 1.21514 0.93775 1.02044 1.01814 1.25787 1.00725 1.02642 1.12708 1.21558 1.00775 0.94894 1.02175 1.21516 1.00601 1.00274 0.96765 0.76696 0.63004 0.53294 0.65036 1.27038 1.07064 1.09547 1.17684 1.27040 1.25028 1.04807 1.04474 1.85332 1.79306 1.46072 1.47455 1.21791 0.98135 0.91427 0.87257 1.21517 1.03592 0.93135 0.97796 1.22894 0.99018 0.80220 1.00149 1.86220 1.69841 1.22046 1.41991 1.18214 0.91393 0.88753 0.86886 1.21157 1.06919 1.02315 0.96033 1.17152 0.89643 0.91773 0.84735 1.91557 1.71658 1.90609 1.56030 1.19153 1.03387 0.93534 0.98650 1.24566 0.91575 1.04361 0.98117 1.86520 1.25993 1.67041 1.55299 0.85872 0.78987 0.77269 0.82048 1.16524 1.16511 1.17179 1.20776 0.94508 0.99110 0.90217 1.20949 1.07655 0.93895 0.99129 1.96791 1.64985 1.89407 1.42223 0.92705 0.92763 0.92125 0.92510 0.92474 0.92511 0.92120 0.92768 0.92698 0.91512 0.90658 0.90815 0.90808 0.90657 0.91507 0.92337 0.92319 0.89327 0.89326 0.91027 0.91029 0.82902 0.90240 0.76940 0.83388 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 0.02 7.85 37.16 0.29 0.32 16 2 C -0.38 0.22 0.53 -90.62 -0.05 0.17 16 3 C -0.14 0.12 7.85 37.16 0.29 0.41 16 4 C -0.13 0.02 7.85 37.16 0.29 0.31 16 5 Si 1.29 -2.07 8.45 -169.99 -1.44 -3.50 16 6 C -0.51 0.67 8.50 101.05 0.86 1.53 16 7 C -0.51 0.65 8.50 101.05 0.86 1.51 16 8 O -0.62 0.29 8.56 -35.23 -0.30 -0.01 16 9 C 0.09 -0.19 5.12 37.16 0.19 0.00 16 10 C -0.12 0.20 5.95 -26.73 -0.16 0.04 16 11 C 0.05 -0.10 4.74 37.16 0.18 0.07 16 12 O -0.29 -0.25 9.47 -19.48 -0.18 -0.43 16 13 C 0.20 0.26 6.68 -39.21 -0.26 0.00 16 14 C -0.24 -0.10 9.02 -39.37 -0.35 -0.46 16 15 C 0.19 0.30 7.24 -39.44 -0.29 0.01 16 16 F -0.12 -0.27 16.75 2.25 0.04 -0.24 16 17 C -0.15 -0.20 5.30 -104.53 -0.55 -0.75 16 18 C -0.08 0.02 2.44 36.01 0.09 0.11 16 19 O -0.54 -0.15 12.86 -35.23 -0.45 -0.61 16 20 Si 0.94 -0.97 25.49 -169.99 -4.33 -5.30 16 21 H -0.24 0.13 7.11 56.52 0.40 0.53 16 22 H -0.24 0.04 6.73 56.52 0.38 0.42 16 23 H -0.25 0.27 7.11 56.52 0.40 0.67 16 24 C -0.03 -0.03 8.39 -39.59 -0.33 -0.37 16 25 C -0.14 -0.26 6.24 -39.37 -0.25 -0.51 16 26 Br -0.02 -0.04 33.16 -68.01 -2.25 -2.29 16 27 H 0.05 -0.04 7.79 -51.93 -0.40 -0.45 16 28 H 0.05 0.01 8.14 -51.93 -0.42 -0.42 16 29 H 0.06 0.00 7.96 -51.93 -0.41 -0.41 16 30 H 0.06 -0.08 7.79 -51.93 -0.40 -0.49 16 31 H 0.06 -0.02 8.14 -51.93 -0.42 -0.45 16 32 H 0.06 -0.09 7.79 -51.93 -0.40 -0.49 16 33 H 0.06 0.01 7.96 -51.93 -0.41 -0.41 16 34 H 0.05 0.01 8.14 -51.93 -0.42 -0.41 16 35 H 0.05 -0.04 7.79 -51.93 -0.40 -0.45 16 36 H 0.07 -0.12 7.48 -51.93 -0.39 -0.51 16 37 H 0.07 -0.11 7.79 -51.92 -0.40 -0.51 16 38 H 0.07 -0.07 7.79 -51.93 -0.40 -0.48 16 39 H 0.07 -0.07 7.79 -51.93 -0.40 -0.47 16 40 H 0.07 -0.11 7.79 -51.93 -0.40 -0.51 16 41 H 0.07 -0.12 7.48 -51.93 -0.39 -0.50 16 42 H 0.06 -0.21 7.21 -51.93 -0.37 -0.58 16 43 H 0.06 -0.21 7.21 -51.93 -0.37 -0.58 16 44 H 0.09 -0.08 8.14 -51.93 -0.42 -0.51 16 45 H 0.09 -0.09 8.14 -51.93 -0.42 -0.52 16 46 H 0.07 -0.23 7.66 -51.93 -0.40 -0.63 16 47 H 0.07 -0.25 7.66 -51.93 -0.40 -0.64 16 48 H 0.15 -0.30 6.30 -52.48 -0.33 -0.63 16 49 H 0.08 -0.13 7.90 -51.93 -0.41 -0.54 16 50 H 0.38 -1.62 8.74 45.56 0.40 -1.22 16 51 H 0.15 0.01 4.88 -52.49 -0.26 -0.24 16 LS Contribution 429.37 15.07 6.47 6.47 Total: 0.00 -5.37 429.37 -9.56 -14.93 By element: Atomic # 1 Polarization: -3.50 SS G_CDS: -7.92 Total: -11.42 kcal Atomic # 6 Polarization: 1.60 SS G_CDS: 0.81 Total: 2.40 kcal Atomic # 8 Polarization: -0.11 SS G_CDS: -0.94 Total: -1.05 kcal Atomic # 9 Polarization: -0.27 SS G_CDS: 0.04 Total: -0.24 kcal Atomic # 14 Polarization: -3.03 SS G_CDS: -5.77 Total: -8.80 kcal Atomic # 35 Polarization: -0.04 SS G_CDS: -2.25 Total: -2.29 kcal Total LS contribution 6.47 Total: 6.47 kcal Total: -5.37 -9.56 -14.93 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_15096606_18527724.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -176.801 kcal (2) G-P(sol) polarization free energy of solvation -5.365 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -182.166 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.565 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.930 kcal (6) G-S(sol) free energy of system = (1) + (5) -191.731 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds