Wall clock time and date at job start Mon Mar 8 2021 12:46:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86300 * 1 3 3 C 1.86301 * 109.47446 * 2 1 4 4 C 1.86307 * 109.46937 * 239.99776 * 2 1 3 5 5 C 1.86303 * 109.46943 * 120.00252 * 2 1 3 6 6 O 1.42899 * 109.47197 * 66.58718 * 5 2 1 7 7 C 1.35912 * 116.99383 * 282.06549 * 6 5 2 8 8 C 1.38643 * 120.04917 * 353.85116 * 7 6 5 9 9 C 1.38402 * 119.93007 * 180.02562 * 8 7 6 10 10 F 1.35099 * 119.98949 * 180.02562 * 9 8 7 11 11 C 1.38468 * 120.02084 * 359.74692 * 9 8 7 12 12 C 1.50698 * 119.95247 * 180.27217 * 11 9 8 13 13 O 1.42904 * 109.46887 * 75.23524 * 12 11 9 14 14 Si 1.86294 * 109.47443 * 315.23661 * 12 11 9 15 15 H 1.48503 * 109.47510 * 60.00001 * 14 12 11 16 16 H 1.48500 * 109.47279 * 179.97438 * 14 12 11 17 17 H 1.48496 * 109.47210 * 299.99853 * 14 12 11 18 18 C 1.38259 * 120.08826 * 0.50967 * 11 9 8 19 19 C 1.38193 * 120.06930 * 359.49053 * 18 11 9 20 20 Br 1.89105 * 120.00738 * 180.27557 * 19 18 11 21 21 H 1.09005 * 109.46794 * 295.55658 * 1 2 3 22 22 H 1.09008 * 109.46840 * 55.54962 * 1 2 3 23 23 H 1.08997 * 109.47071 * 175.55340 * 1 2 3 24 24 H 1.08994 * 109.46890 * 180.02562 * 3 2 1 25 25 H 1.08998 * 109.46717 * 300.00153 * 3 2 1 26 26 H 1.09000 * 109.47138 * 59.99982 * 3 2 1 27 27 H 1.08998 * 109.46944 * 305.00568 * 4 2 1 28 28 H 1.09002 * 109.46740 * 65.00340 * 4 2 1 29 29 H 1.09002 * 109.47072 * 185.00072 * 4 2 1 30 30 H 1.08990 * 109.46983 * 306.57885 * 5 2 1 31 31 H 1.09007 * 109.46643 * 186.58505 * 5 2 1 32 32 H 1.07994 * 120.03386 * 0.02562 * 8 7 6 33 33 H 1.08998 * 109.46937 * 195.23023 * 12 11 9 34 34 H 0.96698 * 114.00383 * 300.00225 * 13 12 11 35 35 H 1.07997 * 119.96178 * 179.76365 * 18 11 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4841 1.7564 0.0000 4 6 2.4840 -0.8783 -1.5212 5 6 2.4840 -0.8783 1.5211 6 8 2.1380 -2.2628 1.4464 7 6 0.8528 -2.5942 1.7392 8 6 -0.0222 -1.6290 2.2134 9 6 -1.3302 -1.9693 2.5113 10 9 -2.1841 -1.0296 2.9730 11 6 -1.7656 -3.2713 2.3309 12 6 -3.1919 -3.6388 2.6499 13 8 -4.0524 -3.1450 1.6214 14 14 -3.6777 -2.8832 4.2820 15 1 -3.5538 -1.4057 4.1999 16 1 -5.0833 -3.2449 4.5960 17 1 -2.7835 -3.3963 5.3507 18 6 -0.8923 -4.2357 1.8630 19 6 0.4146 -3.9000 1.5644 20 35 1.6055 -5.2187 0.9172 21 1 -0.3633 0.4434 0.9272 22 1 -0.3633 0.5814 -0.8475 23 1 -0.3633 -1.0245 -0.0797 24 1 3.5740 1.7563 -0.0005 25 1 2.1207 2.2702 -0.8900 26 1 2.1208 2.2703 0.8900 27 1 2.0492 -1.8768 -1.5671 28 1 2.1956 -0.3153 -2.4089 29 1 3.5703 -0.9566 -1.4775 30 1 2.0277 -0.4370 2.4071 31 1 3.5676 -0.7774 1.5820 32 1 0.3165 -0.6127 2.3502 33 1 -3.2828 -4.7233 2.7101 34 1 -4.0230 -2.1848 1.5113 35 1 -1.2330 -5.2513 1.7267 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_15096606_3095236.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:46:00 Heat of formation + Delta-G solvation = -106.748954 kcal Electronic energy + Delta-G solvation = -20026.107735 eV Core-core repulsion = 16723.836290 eV Total energy + Delta-G solvation = -3302.271445 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 336.011 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -50.50490 -41.50526 -39.17411 -37.35203 -33.37656 -32.41437 -30.33704 -29.73556 -28.60077 -28.54024 -28.27622 -26.32685 -23.84592 -22.69107 -19.83117 -18.78331 -18.20812 -17.58254 -17.29857 -16.86524 -16.57707 -15.97986 -15.61848 -15.49661 -14.91114 -14.47184 -14.35895 -14.21483 -14.13448 -13.96033 -13.89348 -13.46886 -13.44240 -13.30132 -13.16897 -13.09909 -12.57651 -12.38103 -12.14332 -11.70011 -11.24501 -11.19541 -11.09188 -10.99704 -10.96366 -10.50148 -9.94779 -9.21574 -0.34016 -0.11507 0.58598 1.11935 1.26678 1.46349 1.47901 1.51512 1.58656 1.92740 2.10319 2.15394 2.35017 2.89090 3.28231 3.36971 3.52781 3.67632 3.93106 4.05960 4.29864 4.42361 4.48090 4.52109 4.53655 4.55261 4.60344 4.64672 4.69091 4.71533 4.72498 4.90096 5.29180 5.29600 5.39219 5.47993 5.96270 6.42947 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.451 4.451 2 Si 0.987 3.013 3 C -0.447 4.447 4 C -0.442 4.442 5 C -0.252 4.252 6 O -0.270 6.270 7 C 0.183 3.817 8 C -0.234 4.234 9 C 0.147 3.853 10 F -0.120 7.120 11 C -0.185 4.185 12 C -0.072 4.072 13 O -0.533 6.533 14 Si 0.932 3.068 15 H -0.229 1.229 16 H -0.252 1.252 17 H -0.251 1.251 18 C -0.003 4.003 19 C -0.139 4.139 20 Br -0.022 7.022 21 H 0.071 0.929 22 H 0.075 0.925 23 H 0.073 0.927 24 H 0.072 0.928 25 H 0.076 0.924 26 H 0.071 0.929 27 H 0.073 0.927 28 H 0.071 0.929 29 H 0.071 0.929 30 H 0.076 0.924 31 H 0.117 0.883 32 H 0.158 0.842 33 H 0.123 0.877 34 H 0.376 0.624 35 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.026 2.411 0.053 2.621 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.559 4.559 2 Si 1.183 2.817 3 C -0.555 4.555 4 C -0.551 4.551 5 C -0.372 4.372 6 O -0.181 6.181 7 C 0.133 3.867 8 C -0.254 4.254 9 C 0.127 3.873 10 F -0.098 7.098 11 C -0.187 4.187 12 C -0.182 4.182 13 O -0.338 6.338 14 Si 0.752 3.248 15 H -0.152 1.152 16 H -0.176 1.176 17 H -0.174 1.174 18 C -0.023 4.023 19 C -0.219 4.219 20 Br 0.063 6.937 21 H 0.090 0.910 22 H 0.094 0.906 23 H 0.092 0.908 24 H 0.091 0.909 25 H 0.095 0.905 26 H 0.090 0.910 27 H 0.092 0.908 28 H 0.090 0.910 29 H 0.091 0.909 30 H 0.094 0.906 31 H 0.135 0.865 32 H 0.175 0.825 33 H 0.141 0.859 34 H 0.223 0.777 35 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 1.266 1.551 0.547 2.076 hybrid contribution -0.004 1.034 0.003 1.034 sum 1.262 2.586 0.551 2.929 Atomic orbital electron populations 1.26466 1.19685 1.04955 1.04810 0.79887 0.68052 0.67011 0.66726 1.26043 1.06558 1.17906 1.05008 1.25986 1.06450 1.08274 1.14346 1.28359 1.07560 0.85171 1.16081 1.86195 1.22705 1.26911 1.82313 1.18338 0.84650 0.91635 0.92052 1.21236 0.93265 1.01722 1.09214 1.17335 0.87553 0.85771 0.96667 1.91599 1.68609 1.64351 1.85269 1.20190 0.98725 0.92299 1.07532 1.24866 0.85908 1.05297 1.02155 1.86555 1.63723 1.27227 1.56270 0.86202 0.81567 0.81964 0.75044 1.15173 1.17600 1.17410 1.20739 0.89369 0.99942 0.92287 1.21132 0.95783 0.92316 1.12692 1.96793 1.60734 1.49872 1.86290 0.91033 0.90612 0.90824 0.90853 0.90526 0.90995 0.90763 0.90968 0.90949 0.90591 0.86511 0.82485 0.85876 0.77727 0.82908 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.94 7.04 101.05 0.71 1.65 16 2 Si 0.99 -3.24 11.68 -169.99 -1.99 -5.23 16 3 C -0.45 1.32 8.65 101.05 0.87 2.19 16 4 C -0.44 0.64 8.65 101.05 0.87 1.51 16 5 C -0.25 0.59 5.31 101.05 0.54 1.13 16 6 O -0.27 -0.12 9.13 -19.46 -0.18 -0.30 16 7 C 0.18 0.12 5.78 -39.21 -0.23 -0.10 16 8 C -0.23 0.07 5.62 -39.37 -0.22 -0.15 16 9 C 0.15 0.03 6.62 -39.44 -0.26 -0.23 16 10 F -0.12 -0.05 12.59 2.25 0.03 -0.02 16 11 C -0.19 -0.01 4.79 -104.53 -0.50 -0.51 16 12 C -0.07 0.04 2.81 36.00 0.10 0.14 16 13 O -0.53 -0.25 12.88 -35.23 -0.45 -0.70 16 14 Si 0.93 0.06 26.08 -169.99 -4.43 -4.37 16 15 H -0.23 -0.11 5.28 56.52 0.30 0.19 16 16 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 17 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 18 C 0.00 0.00 9.40 -39.59 -0.37 -0.37 16 19 C -0.14 -0.15 6.24 -39.37 -0.25 -0.39 16 20 Br -0.02 -0.03 33.16 -68.01 -2.25 -2.29 16 21 H 0.07 -0.18 6.50 -51.93 -0.34 -0.52 16 22 H 0.07 -0.16 7.96 -51.92 -0.41 -0.58 16 23 H 0.07 -0.07 6.55 -51.93 -0.34 -0.41 16 24 H 0.07 -0.22 7.96 -51.93 -0.41 -0.63 16 25 H 0.08 -0.20 7.96 -51.93 -0.41 -0.62 16 26 H 0.07 -0.23 7.96 -51.93 -0.41 -0.64 16 27 H 0.07 -0.03 7.96 -51.93 -0.41 -0.44 16 28 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 29 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 30 H 0.08 -0.26 6.06 -51.93 -0.31 -0.57 16 31 H 0.12 -0.41 7.96 -51.93 -0.41 -0.82 16 32 H 0.16 -0.37 4.24 -52.49 -0.22 -0.59 16 33 H 0.12 -0.25 7.77 -51.93 -0.40 -0.65 16 34 H 0.38 -0.80 8.44 45.56 0.38 -0.41 16 35 H 0.15 -0.27 8.00 -52.49 -0.42 -0.69 16 LS Contribution 307.18 15.07 4.63 4.63 Total: 0.00 -4.39 307.18 -7.24 -11.62 By element: Atomic # 1 Polarization: -4.35 SS G_CDS: -3.86 Total: -8.21 kcal Atomic # 6 Polarization: 3.60 SS G_CDS: 1.27 Total: 4.87 kcal Atomic # 8 Polarization: -0.37 SS G_CDS: -0.63 Total: -1.00 kcal Atomic # 9 Polarization: -0.05 SS G_CDS: 0.03 Total: -0.02 kcal Atomic # 14 Polarization: -3.18 SS G_CDS: -6.42 Total: -9.60 kcal Atomic # 35 Polarization: -0.03 SS G_CDS: -2.25 Total: -2.29 kcal Total LS contribution 4.63 Total: 4.63 kcal Total: -4.39 -7.24 -11.62 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_15096606_3095236.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -95.124 kcal (2) G-P(sol) polarization free energy of solvation -4.387 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.511 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.238 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -11.625 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.749 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds