Wall clock time and date at job start Mon Mar 8 2021 13:16:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35921 * 116.99812 * 2 1 4 4 C 1.38730 * 120.01266 * 180.02562 * 3 2 1 5 5 C 1.50692 * 119.97054 * 359.97438 * 4 3 2 6 6 O 1.42898 * 109.47351 * 284.97811 * 5 4 3 7 7 Si 1.86303 * 109.47074 * 164.97541 * 5 4 3 8 8 C 1.38220 * 120.05706 * 179.97438 * 4 3 2 9 9 C 1.38227 * 120.09926 * 359.97438 * 8 4 3 10 10 Cl 1.73595 * 119.98281 * 180.02562 * 9 8 4 11 11 C 1.38882 * 120.03199 * 0.02688 * 9 8 4 12 12 O 1.35922 * 120.03213 * 179.97438 * 11 9 8 13 13 C 1.42898 * 117.00404 * 180.02562 * 12 11 9 14 14 C 1.52997 * 109.47183 * 180.02562 * 13 12 11 15 15 H 1.09000 * 112.90903 * 43.74575 * 14 13 12 16 16 C 1.53784 * 113.61330 * 174.99947 * 14 13 12 17 17 C 1.53787 * 87.07923 * 139.97966 * 16 14 13 18 18 H 1.09004 * 113.60869 * 89.20131 * 17 16 14 19 19 O 1.42899 * 113.61449 * 220.01588 * 17 16 14 20 20 C 1.53778 * 87.08035 * 334.56830 * 17 16 14 21 21 C 1.38579 * 119.93898 * 0.22938 * 11 9 8 22 22 H 1.08998 * 109.47498 * 59.99672 * 1 2 3 23 23 H 1.09000 * 109.47141 * 180.02562 * 1 2 3 24 24 H 1.09003 * 109.46487 * 299.99371 * 1 2 3 25 25 H 1.09000 * 109.47039 * 44.98134 * 5 4 3 26 26 H 0.96692 * 113.99725 * 300.00105 * 6 5 4 27 27 H 1.48504 * 109.99634 * 58.68380 * 7 5 4 28 28 H 1.48503 * 110.00076 * 179.97438 * 7 5 4 29 29 H 1.08003 * 119.94851 * 179.97438 * 8 4 3 30 30 H 1.09004 * 109.46916 * 60.00148 * 13 12 11 31 31 H 1.08995 * 109.46738 * 300.00173 * 13 12 11 32 32 H 1.09004 * 113.61451 * 25.43452 * 16 14 13 33 33 H 1.08994 * 113.61477 * 254.52754 * 16 14 13 34 34 H 0.96698 * 114.00160 * 179.97438 * 19 17 16 35 35 H 1.08999 * 113.61111 * 139.98327 * 20 17 16 36 36 H 1.08999 * 113.61280 * 270.79710 * 20 17 16 37 37 H 1.08001 * 120.05316 * 179.72406 * 21 11 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2111 0.0000 4 6 3.4314 1.2840 -0.0005 5 6 4.2518 0.0200 -0.0005 6 8 4.2196 -0.5688 1.3011 7 14 6.0128 0.4226 -0.4566 8 6 4.0599 2.5151 -0.0011 9 6 3.3099 3.6763 -0.0016 10 17 4.1023 5.2208 -0.0030 11 6 1.9228 3.6078 -0.0010 12 8 1.1853 4.7495 -0.0010 13 6 -0.2362 4.6038 0.0001 14 6 -0.8907 5.9867 -0.0007 15 1 -0.4171 6.6798 -0.6960 16 6 -2.4231 5.9429 -0.1224 17 6 -2.4589 7.0842 0.9078 18 1 -2.4155 8.0774 0.4607 19 8 -3.5073 6.9541 1.8700 20 6 -1.0977 6.5711 1.4066 21 6 1.2912 2.3743 0.0049 22 1 -0.3634 0.5139 -0.8899 23 1 -0.3633 -1.0277 0.0005 24 1 -0.3632 0.5138 0.8901 25 1 3.8396 -0.6807 -0.7266 26 1 4.5721 0.0001 1.9989 27 1 6.5760 1.4016 0.5076 28 1 6.8325 -0.8157 -0.4596 29 1 5.1385 2.5699 -0.0011 30 1 -0.5445 4.0560 0.8907 31 1 -0.5458 4.0551 -0.8893 32 1 -2.8635 5.0139 0.2398 33 1 -2.7914 6.2316 -1.1068 34 1 -3.5347 7.6687 2.5209 35 1 -0.3961 7.3669 1.6565 36 1 -1.1758 5.8149 2.1877 37 1 0.2126 2.3189 0.0098 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_15096628_11354858.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 13:16:19 Heat of formation + Delta-G solvation = -103.079924 kcal Electronic energy + Delta-G solvation = -22548.007297 eV Core-core repulsion = 18898.908099 eV Total energy + Delta-G solvation = -3649.099199 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 301.085 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -41.91965 -40.73914 -39.72539 -38.56027 -37.59838 -36.77938 -36.07371 -32.20734 -31.30332 -29.69141 -28.38362 -26.89948 -26.28871 -24.30774 -23.11415 -22.51102 -20.79909 -19.96104 -18.79064 -18.38978 -18.02527 -17.41445 -17.31315 -16.87311 -16.47720 -16.37155 -16.00872 -15.95088 -15.47403 -15.38895 -14.93893 -14.70688 -14.17783 -13.94424 -13.60104 -13.52932 -13.16503 -12.91632 -12.77316 -12.71474 -12.62594 -12.39695 -12.28786 -11.91397 -11.74792 -11.63562 -11.49793 -11.32771 -10.87455 -10.51566 -9.89749 -9.00437 -4.94379 -0.01302 0.12095 1.23284 1.30526 1.58259 1.85910 1.97267 2.12344 2.35075 3.09788 3.29042 3.40229 3.44014 3.47693 3.62524 3.68590 3.73094 3.78920 3.96945 4.04061 4.07480 4.09597 4.12792 4.20254 4.25939 4.43393 4.50241 4.51997 4.61834 4.63847 4.77226 4.84366 4.85174 4.97473 5.02271 5.20998 5.30320 5.97145 6.24076 6.49024 6.59681 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 O -0.297 6.297 3 C 0.201 3.799 4 C -0.179 4.179 5 C -0.056 4.056 6 O -0.524 6.524 7 Si 0.682 3.318 8 C -0.037 4.037 9 C -0.104 4.104 10 Cl -0.052 7.052 11 C 0.190 3.810 12 O -0.295 6.295 13 C 0.069 3.931 14 C -0.109 4.109 15 H 0.108 0.892 16 C -0.120 4.120 17 C 0.076 3.924 18 H 0.086 0.914 19 O -0.560 6.560 20 C -0.164 4.164 21 C -0.292 4.292 22 H 0.058 0.942 23 H 0.106 0.894 24 H 0.057 0.943 25 H 0.119 0.881 26 H 0.373 0.627 27 H -0.257 1.257 28 H -0.254 1.254 29 H 0.150 0.850 30 H 0.067 0.933 31 H 0.068 0.932 32 H 0.093 0.907 33 H 0.081 0.919 34 H 0.381 0.619 35 H 0.075 0.925 36 H 0.090 0.910 37 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.651 1.631 -1.753 3.572 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.208 6.208 3 C 0.154 3.846 4 C -0.180 4.180 5 C -0.166 4.166 6 O -0.330 6.330 7 Si 0.583 3.417 8 C -0.056 4.056 9 C -0.131 4.131 10 Cl -0.023 7.023 11 C 0.142 3.858 12 O -0.207 6.207 13 C -0.006 4.006 14 C -0.127 4.127 15 H 0.126 0.874 16 C -0.157 4.157 17 C 0.017 3.983 18 H 0.103 0.897 19 O -0.366 6.366 20 C -0.201 4.201 21 C -0.312 4.312 22 H 0.077 0.923 23 H 0.125 0.875 24 H 0.076 0.924 25 H 0.137 0.863 26 H 0.220 0.780 27 H -0.182 1.182 28 H -0.178 1.178 29 H 0.167 0.833 30 H 0.085 0.915 31 H 0.086 0.914 32 H 0.111 0.889 33 H 0.100 0.900 34 H 0.229 0.771 35 H 0.094 0.906 36 H 0.109 0.891 37 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges -2.009 0.721 -2.180 3.052 hybrid contribution -0.563 0.725 1.490 1.750 sum -2.572 1.447 -0.690 3.031 Atomic orbital electron populations 1.23188 0.77883 1.04742 1.01462 1.86209 1.21629 1.25827 1.87162 1.18544 0.91206 0.83975 0.90918 1.19416 0.91328 0.95467 1.11800 1.24764 1.08971 0.94443 0.88379 1.86647 1.85070 1.44955 1.16322 0.95078 0.74656 0.81312 0.90611 1.20732 1.00269 0.89146 0.95433 1.19886 0.89303 0.88293 1.15634 1.98379 1.79441 1.27201 1.97277 1.18355 0.89442 0.85366 0.92648 1.86190 1.19262 1.27949 1.87303 1.22918 0.77577 0.98322 1.01779 1.22327 0.95279 0.95827 0.99271 0.87369 1.23071 0.93698 0.99644 0.99313 1.23285 0.86376 0.98275 0.90341 0.89659 1.86515 1.53216 1.52284 1.44601 1.23777 0.97928 1.01739 0.96687 1.21264 1.01015 0.91211 1.17723 0.92334 0.87542 0.92438 0.86307 0.78009 1.18183 1.17833 0.83255 0.91471 0.91354 0.88858 0.90008 0.77119 0.90630 0.89108 0.83788 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 9.81 101.05 0.99 0.95 16 2 O -0.30 -0.46 9.82 -19.49 -0.19 -0.65 16 3 C 0.20 0.31 6.66 -39.24 -0.26 0.04 16 4 C -0.18 -0.20 5.27 -104.45 -0.55 -0.76 16 5 C -0.06 -0.04 2.37 36.00 0.09 0.04 16 6 O -0.52 -1.17 12.88 -35.23 -0.45 -1.62 16 7 Si 0.68 -0.32 30.24 -169.99 -5.14 -5.46 16 8 C -0.04 -0.03 8.43 -39.59 -0.33 -0.37 16 9 C -0.10 -0.21 6.33 -39.35 -0.25 -0.46 16 10 Cl -0.05 -0.12 28.50 -51.86 -1.48 -1.60 16 11 C 0.19 0.33 6.68 -39.22 -0.26 0.06 16 12 O -0.29 -0.43 9.59 -19.49 -0.19 -0.61 16 13 C 0.07 -0.08 4.58 37.16 0.17 0.09 16 14 C -0.11 0.17 4.01 -89.81 -0.36 -0.19 16 15 H 0.11 -0.17 8.14 -51.93 -0.42 -0.59 16 16 C -0.12 0.20 7.47 -25.91 -0.19 0.01 16 17 C 0.08 -0.10 5.21 -25.92 -0.14 -0.23 16 18 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 19 O -0.56 -0.04 13.67 -35.23 -0.48 -0.52 16 20 C -0.16 0.20 7.46 -25.92 -0.19 0.00 16 21 C -0.29 -0.19 8.02 -39.30 -0.32 -0.50 16 22 H 0.06 -0.18 7.67 -51.93 -0.40 -0.58 16 23 H 0.11 -0.34 8.14 -51.93 -0.42 -0.76 16 24 H 0.06 -0.15 7.65 -51.93 -0.40 -0.55 16 25 H 0.12 0.08 7.82 -51.93 -0.41 -0.32 16 26 H 0.37 -0.29 8.70 45.56 0.40 0.11 16 27 H -0.26 -0.23 6.68 56.52 0.38 0.15 16 28 H -0.25 -0.67 7.11 56.52 0.40 -0.27 16 29 H 0.15 -0.07 4.85 -52.48 -0.25 -0.32 16 30 H 0.07 -0.11 7.36 -51.93 -0.38 -0.49 16 31 H 0.07 -0.16 7.67 -51.93 -0.40 -0.55 16 32 H 0.09 -0.13 8.10 -51.93 -0.42 -0.55 16 33 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 34 H 0.38 -1.44 9.12 45.56 0.42 -1.02 16 35 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 36 H 0.09 -0.05 7.90 -51.93 -0.41 -0.46 16 37 H 0.14 -0.21 4.53 -52.49 -0.24 -0.45 16 LS Contribution 322.89 15.07 4.87 4.87 Total: 0.00 -6.83 322.89 -8.50 -15.33 By element: Atomic # 1 Polarization: -4.60 SS G_CDS: -3.83 Total: -8.42 kcal Atomic # 6 Polarization: 0.31 SS G_CDS: -1.61 Total: -1.30 kcal Atomic # 8 Polarization: -2.10 SS G_CDS: -1.31 Total: -3.41 kcal Atomic # 14 Polarization: -0.32 SS G_CDS: -5.14 Total: -5.46 kcal Atomic # 17 Polarization: -0.12 SS G_CDS: -1.48 Total: -1.60 kcal Total LS contribution 4.87 Total: 4.87 kcal Total: -6.83 -8.50 -15.33 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_15096628_11354858.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.750 kcal (2) G-P(sol) polarization free energy of solvation -6.827 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.577 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.503 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.330 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.080 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds