Wall clock time and date at job start Mon Mar 8 2021 13:16:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35921 * 116.99812 * 2 1 4 4 C 1.38730 * 120.01266 * 180.02562 * 3 2 1 5 5 C 1.50692 * 119.97054 * 359.97438 * 4 3 2 6 6 O 1.42898 * 109.47351 * 284.97811 * 5 4 3 7 7 Si 1.86303 * 109.47074 * 164.97541 * 5 4 3 8 8 C 1.38220 * 120.05706 * 179.97438 * 4 3 2 9 9 C 1.38227 * 120.09926 * 359.97438 * 8 4 3 10 10 Cl 1.73595 * 119.98281 * 180.02562 * 9 8 4 11 11 C 1.38882 * 120.03199 * 0.02688 * 9 8 4 12 12 O 1.35922 * 120.03213 * 179.97438 * 11 9 8 13 13 C 1.42898 * 117.00404 * 180.02562 * 12 11 9 14 14 C 1.52997 * 109.47183 * 180.02562 * 13 12 11 15 15 H 1.09000 * 112.90903 * 43.74575 * 14 13 12 16 16 C 1.53784 * 113.61330 * 174.99947 * 14 13 12 17 17 C 1.53787 * 87.07923 * 139.97966 * 16 14 13 18 18 H 1.09004 * 113.60869 * 89.20131 * 17 16 14 19 19 O 1.42899 * 113.61449 * 220.01588 * 17 16 14 20 20 C 1.53778 * 87.08035 * 334.56830 * 17 16 14 21 21 C 1.38579 * 119.93898 * 0.22938 * 11 9 8 22 22 H 1.08998 * 109.47498 * 59.99672 * 1 2 3 23 23 H 1.09000 * 109.47141 * 180.02562 * 1 2 3 24 24 H 1.09003 * 109.46487 * 299.99371 * 1 2 3 25 25 H 1.09000 * 109.47039 * 44.98134 * 5 4 3 26 26 H 0.96692 * 113.99725 * 300.00105 * 6 5 4 27 27 H 1.48504 * 109.99634 * 58.68380 * 7 5 4 28 28 H 1.48503 * 110.00076 * 179.97438 * 7 5 4 29 29 H 1.08003 * 119.94851 * 179.97438 * 8 4 3 30 30 H 1.09004 * 109.46916 * 60.00148 * 13 12 11 31 31 H 1.08995 * 109.46738 * 300.00173 * 13 12 11 32 32 H 1.09004 * 113.61451 * 25.43452 * 16 14 13 33 33 H 1.08994 * 113.61477 * 254.52754 * 16 14 13 34 34 H 0.96698 * 114.00160 * 179.97438 * 19 17 16 35 35 H 1.08999 * 113.61111 * 139.98327 * 20 17 16 36 36 H 1.08999 * 113.61280 * 270.79710 * 20 17 16 37 37 H 1.08001 * 120.05316 * 179.72406 * 21 11 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2111 0.0000 4 6 3.4314 1.2840 -0.0005 5 6 4.2518 0.0200 -0.0005 6 8 4.2196 -0.5688 1.3011 7 14 6.0128 0.4226 -0.4566 8 6 4.0599 2.5151 -0.0011 9 6 3.3099 3.6763 -0.0016 10 17 4.1023 5.2208 -0.0030 11 6 1.9228 3.6078 -0.0010 12 8 1.1853 4.7495 -0.0010 13 6 -0.2362 4.6038 0.0001 14 6 -0.8907 5.9867 -0.0007 15 1 -0.4171 6.6798 -0.6960 16 6 -2.4231 5.9429 -0.1224 17 6 -2.4589 7.0842 0.9078 18 1 -2.4155 8.0774 0.4607 19 8 -3.5073 6.9541 1.8700 20 6 -1.0977 6.5711 1.4066 21 6 1.2912 2.3743 0.0049 22 1 -0.3634 0.5139 -0.8899 23 1 -0.3633 -1.0277 0.0005 24 1 -0.3632 0.5138 0.8901 25 1 3.8396 -0.6807 -0.7266 26 1 4.5721 0.0001 1.9989 27 1 6.5760 1.4016 0.5076 28 1 6.8325 -0.8157 -0.4596 29 1 5.1385 2.5699 -0.0011 30 1 -0.5445 4.0560 0.8907 31 1 -0.5458 4.0551 -0.8893 32 1 -2.8635 5.0139 0.2398 33 1 -2.7914 6.2316 -1.1068 34 1 -3.5347 7.6687 2.5209 35 1 -0.3961 7.3669 1.6565 36 1 -1.1758 5.8149 2.1877 37 1 0.2126 2.3189 0.0098 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_15096628_11354858.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 13:16:19 Heat of formation + Delta-G solvation = -102.670705 kcal Electronic energy + Delta-G solvation = -22547.989552 eV Core-core repulsion = 18898.908099 eV Total energy + Delta-G solvation = -3649.081454 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 301.085 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -41.93972 -40.66820 -39.69765 -38.60395 -37.70077 -36.86167 -36.00837 -32.24943 -31.32836 -29.61009 -28.28694 -26.77731 -26.32370 -24.26176 -23.11650 -22.51750 -20.69043 -19.95358 -18.74070 -18.44322 -18.00971 -17.45648 -17.29426 -16.83625 -16.48425 -16.28237 -16.00797 -15.93384 -15.50812 -15.40968 -14.91281 -14.67306 -14.21796 -13.94221 -13.52937 -13.48281 -13.18081 -12.88114 -12.68260 -12.65871 -12.58447 -12.38688 -12.27080 -11.86447 -11.80295 -11.72509 -11.48593 -11.22941 -10.76446 -10.58102 -9.92807 -9.07646 -4.93288 -0.05583 0.04622 1.13208 1.28801 1.56443 1.88322 1.93482 2.17612 2.29546 3.25587 3.41058 3.43013 3.47870 3.53662 3.67356 3.72245 3.78592 3.92546 4.04417 4.17341 4.17601 4.20885 4.28127 4.29549 4.35847 4.45369 4.64819 4.65796 4.73016 4.73651 4.78567 4.82312 4.96863 4.98298 5.10176 5.26374 5.35622 5.99008 6.24985 6.51750 6.84647 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.315 6.315 3 C 0.192 3.808 4 C -0.183 4.183 5 C -0.064 4.064 6 O -0.545 6.545 7 Si 0.761 3.239 8 C -0.035 4.035 9 C -0.118 4.118 10 Cl -0.060 7.060 11 C 0.182 3.818 12 O -0.307 6.307 13 C 0.064 3.936 14 C -0.104 4.104 15 H 0.109 0.891 16 C -0.118 4.118 17 C 0.073 3.927 18 H 0.098 0.902 19 O -0.581 6.581 20 C -0.164 4.164 21 C -0.289 4.289 22 H 0.072 0.928 23 H 0.118 0.882 24 H 0.064 0.936 25 H 0.117 0.883 26 H 0.383 0.617 27 H -0.272 1.272 28 H -0.296 1.296 29 H 0.160 0.840 30 H 0.072 0.928 31 H 0.082 0.918 32 H 0.090 0.910 33 H 0.090 0.910 34 H 0.395 0.605 35 H 0.073 0.927 36 H 0.082 0.918 37 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.265 1.829 -2.123 4.303 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 O -0.227 6.227 3 C 0.144 3.856 4 C -0.185 4.185 5 C -0.173 4.173 6 O -0.353 6.353 7 Si 0.665 3.335 8 C -0.053 4.053 9 C -0.146 4.146 10 Cl -0.031 7.031 11 C 0.134 3.866 12 O -0.220 6.220 13 C -0.010 4.010 14 C -0.122 4.122 15 H 0.127 0.873 16 C -0.156 4.156 17 C 0.014 3.986 18 H 0.115 0.885 19 O -0.390 6.390 20 C -0.202 4.202 21 C -0.308 4.308 22 H 0.090 0.910 23 H 0.136 0.864 24 H 0.083 0.917 25 H 0.135 0.865 26 H 0.232 0.768 27 H -0.198 1.198 28 H -0.224 1.224 29 H 0.177 0.823 30 H 0.090 0.910 31 H 0.100 0.900 32 H 0.108 0.892 33 H 0.109 0.891 34 H 0.245 0.755 35 H 0.092 0.908 36 H 0.101 0.899 37 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -2.652 0.941 -2.543 3.793 hybrid contribution -0.423 0.630 1.640 1.807 sum -3.075 1.571 -0.903 3.569 Atomic orbital electron populations 1.23434 0.76296 1.05911 1.02465 1.86187 1.23413 1.25975 1.87146 1.18722 0.91527 0.84323 0.90979 1.19481 0.91525 0.95515 1.11938 1.24971 1.10118 0.94314 0.87898 1.86606 1.85492 1.45925 1.17227 0.94135 0.71850 0.78270 0.89197 1.20805 1.00731 0.88764 0.95023 1.20053 0.89711 0.88198 1.16594 1.98369 1.79589 1.27805 1.97372 1.18479 0.89501 0.85813 0.92793 1.86176 1.20436 1.28098 1.87299 1.23085 0.76444 0.98823 1.02651 1.22288 0.95384 0.95636 0.98902 0.87308 1.23071 0.93410 0.99417 0.99671 1.23409 0.85872 0.99032 0.90263 0.88474 1.86471 1.53684 1.53471 1.45349 1.23751 0.98152 1.01528 0.96762 1.21404 1.01925 0.90498 1.16997 0.90981 0.86418 0.91733 0.86477 0.76774 1.19793 1.22421 0.82255 0.91005 0.90009 0.89182 0.89132 0.75516 0.90825 0.89926 0.81967 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.32 -0.96 9.82 -92.66 -0.91 -1.87 16 3 C 0.19 0.58 6.66 22.49 0.15 0.73 16 4 C -0.18 -0.45 5.27 -19.75 -0.10 -0.55 16 5 C -0.06 -0.12 2.37 71.23 0.17 0.05 16 6 O -0.54 -2.71 12.88 -148.98 -1.92 -4.63 16 7 Si 0.76 -0.55 30.24 68.60 2.07 1.52 16 8 C -0.04 -0.07 8.43 22.26 0.19 0.12 16 9 C -0.12 -0.50 6.33 22.42 0.14 -0.36 16 10 Cl -0.06 -0.31 28.50 -2.72 -0.08 -0.38 16 11 C 0.18 0.63 6.68 22.51 0.15 0.78 16 12 O -0.31 -0.88 9.59 -92.67 -0.89 -1.77 16 13 C 0.06 -0.18 4.58 71.98 0.33 0.15 16 14 C -0.10 0.36 4.01 -10.27 -0.04 0.32 16 15 H 0.11 -0.38 8.14 -2.39 -0.02 -0.39 16 16 C -0.12 0.46 7.47 31.12 0.23 0.69 16 17 C 0.07 -0.21 5.21 31.12 0.16 -0.04 16 18 H 0.10 -0.53 8.14 -2.39 -0.02 -0.55 16 19 O -0.58 -0.02 13.67 -148.98 -2.04 -2.06 16 20 C -0.16 0.38 7.46 31.12 0.23 0.61 16 21 C -0.29 -0.27 8.02 22.45 0.18 -0.09 16 22 H 0.07 -0.52 7.67 -2.39 -0.02 -0.54 16 23 H 0.12 -0.83 8.14 -2.39 -0.02 -0.85 16 24 H 0.06 -0.38 7.65 -2.39 -0.02 -0.40 16 25 H 0.12 0.22 7.82 -2.39 -0.02 0.20 16 26 H 0.38 -0.40 8.70 -74.06 -0.64 -1.04 16 27 H -0.27 -0.45 6.68 99.48 0.66 0.22 16 28 H -0.30 -1.91 7.11 99.48 0.71 -1.21 16 29 H 0.16 -0.15 4.85 -2.91 -0.01 -0.17 16 30 H 0.07 -0.27 7.36 -2.38 -0.02 -0.29 16 31 H 0.08 -0.45 7.67 -2.39 -0.02 -0.47 16 32 H 0.09 -0.28 8.10 -2.39 -0.02 -0.30 16 33 H 0.09 -0.51 8.14 -2.39 -0.02 -0.53 16 34 H 0.39 -2.98 9.12 -74.06 -0.68 -3.65 16 35 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 36 H 0.08 -0.05 7.90 -2.39 -0.02 -0.07 16 37 H 0.16 -0.62 4.53 -2.91 -0.01 -0.63 16 Total: 0.00 -15.53 322.89 -1.06 -16.59 By element: Atomic # 1 Polarization: -10.65 SS G_CDS: -0.20 Total: -10.85 kcal Atomic # 6 Polarization: 0.55 SS G_CDS: 2.90 Total: 3.45 kcal Atomic # 8 Polarization: -4.57 SS G_CDS: -5.75 Total: -10.32 kcal Atomic # 14 Polarization: -0.55 SS G_CDS: 2.07 Total: 1.52 kcal Atomic # 17 Polarization: -0.31 SS G_CDS: -0.08 Total: -0.38 kcal Total: -15.53 -1.06 -16.59 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_15096628_11354858.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -86.085 kcal (2) G-P(sol) polarization free energy of solvation -15.530 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -101.615 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.056 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.586 kcal (6) G-S(sol) free energy of system = (1) + (5) -102.671 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds