Wall clock time and date at job start Mon Mar 8 2021 14:47:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86302 * 109.47193 * 2 1 4 4 C 1.50704 * 109.47024 * 240.00173 * 2 1 3 5 5 C 1.38698 * 120.01092 * 285.00409 * 4 2 1 6 6 O 1.35919 * 120.04042 * 359.97438 * 5 4 2 7 7 C 1.42901 * 117.00004 * 180.02562 * 6 5 4 8 8 C 1.53003 * 109.47045 * 180.02562 * 7 6 5 9 9 H 1.08996 * 112.85140 * 43.80136 * 8 7 6 10 10 C 1.53781 * 113.61480 * 175.00170 * 8 7 6 11 11 C 1.53786 * 87.17350 * 139.93948 * 10 8 7 12 12 H 1.08993 * 113.61491 * 89.15923 * 11 10 8 13 13 O 1.42902 * 113.61284 * 220.06071 * 11 10 8 14 14 C 1.53782 * 113.61259 * 272.50005 * 8 7 6 15 15 C 1.38730 * 119.92326 * 180.27739 * 5 4 2 16 16 C 1.38206 * 119.94818 * 359.50583 * 15 5 4 17 17 Br 1.89103 * 119.99215 * 180.23528 * 16 15 5 18 18 C 1.38481 * 120.02072 * 0.46554 * 16 15 5 19 19 Cl 1.73602 * 119.96172 * 179.76462 * 18 16 15 20 20 C 1.38180 * 120.01031 * 105.01864 * 4 2 1 21 21 H 0.96698 * 113.99927 * 180.02562 * 1 2 3 22 22 H 1.08994 * 109.47453 * 120.00190 * 2 1 3 23 23 H 1.48492 * 110.00084 * 180.02562 * 3 2 1 24 24 H 1.48504 * 109.99802 * 301.32575 * 3 2 1 25 25 H 1.08994 * 109.47081 * 60.00696 * 7 6 5 26 26 H 1.09002 * 109.47607 * 300.00111 * 7 6 5 27 27 H 1.09002 * 113.61445 * 254.52948 * 10 8 7 28 28 H 1.09002 * 113.61408 * 25.34678 * 10 8 7 29 29 H 0.96700 * 113.99699 * 179.97438 * 13 11 10 30 30 H 1.08997 * 113.61668 * 334.56352 * 14 8 7 31 31 H 1.08998 * 113.61674 * 105.38861 * 14 8 7 32 32 H 1.08005 * 120.02879 * 179.74552 * 15 5 4 33 33 H 1.07996 * 119.97554 * 359.97438 * 20 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.8694 -2.0939 -1.3067 6 8 1.3562 -2.8101 -0.2717 7 6 1.3242 -4.2311 -0.4189 8 6 0.7174 -4.8603 0.8368 9 1 -0.1679 -4.3315 1.1898 10 6 0.5247 -6.3824 0.7316 11 6 0.9965 -6.4665 2.1928 12 1 0.1882 -6.3778 2.9185 13 8 1.8583 -7.5764 2.4530 14 6 1.7478 -5.1463 1.9419 15 6 2.3376 -2.7463 -2.4379 16 6 2.8554 -2.0161 -3.4909 17 35 3.4878 -2.9038 -5.0362 18 6 2.9156 -0.6348 -3.4128 19 17 3.5719 0.2805 -4.7338 20 6 2.4540 0.0164 -2.2831 21 1 -0.3933 -0.8834 0.0004 22 1 1.7924 -0.5138 0.8899 23 1 3.5349 1.7702 -0.0006 24 1 1.5353 2.4771 -1.1921 25 1 2.3384 -4.6048 -0.5592 26 1 0.7173 -4.4931 -1.2857 27 1 -0.5137 -6.6823 0.5901 28 1 1.2033 -6.8606 0.0253 29 1 2.1587 -7.6345 3.3704 30 1 2.7618 -5.2869 1.5677 31 1 1.6979 -4.4475 2.7769 32 1 2.2940 -3.8239 -2.4973 33 1 2.5020 1.0936 -2.2238 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_15163260_11354858.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 14:47:38 Heat of formation + Delta-G solvation = -69.901141 kcal Electronic energy + Delta-G solvation = -20494.074206 eV Core-core repulsion = 16980.815555 eV Total energy + Delta-G solvation = -3513.258651 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.980 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -41.92070 -40.54939 -38.98633 -37.92185 -37.21750 -36.15479 -33.93519 -31.55367 -31.14428 -29.45637 -26.94569 -26.55665 -24.81097 -23.16246 -22.74231 -20.78053 -19.46935 -18.77943 -18.48011 -17.92564 -17.44127 -17.17195 -16.58169 -16.13350 -15.87903 -15.62934 -15.27085 -15.03928 -14.65237 -14.36530 -14.07465 -13.65866 -13.62820 -13.27448 -13.08973 -12.81389 -12.52016 -12.44362 -12.33076 -12.20812 -12.03741 -11.66535 -11.44974 -11.38491 -11.24630 -11.11500 -10.92030 -10.21446 -9.44202 -4.89537 -0.45781 -0.21777 0.24872 0.94539 1.28184 1.59577 1.71143 1.88915 2.03312 3.04263 3.20456 3.24232 3.30673 3.33710 3.56350 3.59678 3.72289 3.80033 3.92234 3.93904 3.96649 4.09240 4.14148 4.20047 4.41530 4.47532 4.55167 4.56800 4.58650 4.74572 4.77700 4.90031 5.03280 5.15824 5.91248 6.49034 6.56231 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.073 4.073 3 Si 0.744 3.256 4 C -0.118 4.118 5 C 0.156 3.844 6 O -0.302 6.302 7 C 0.066 3.934 8 C -0.109 4.109 9 H 0.108 0.892 10 C -0.120 4.120 11 C 0.077 3.923 12 H 0.086 0.914 13 O -0.560 6.560 14 C -0.164 4.164 15 C -0.168 4.168 16 C -0.044 4.044 17 Br -0.014 7.014 18 C -0.045 4.045 19 Cl -0.038 7.038 20 C -0.068 4.068 21 H 0.367 0.633 22 H 0.082 0.918 23 H -0.245 1.245 24 H -0.248 1.248 25 H 0.070 0.930 26 H 0.071 0.929 27 H 0.082 0.918 28 H 0.094 0.906 29 H 0.381 0.619 30 H 0.091 0.909 31 H 0.075 0.925 32 H 0.151 0.849 33 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.340 -1.346 4.896 5.252 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.182 4.182 3 Si 0.641 3.359 4 C -0.120 4.120 5 C 0.109 3.891 6 O -0.215 6.215 7 C -0.009 4.009 8 C -0.127 4.127 9 H 0.126 0.874 10 C -0.158 4.158 11 C 0.018 3.982 12 H 0.104 0.896 13 O -0.365 6.365 14 C -0.202 4.202 15 C -0.189 4.189 16 C -0.125 4.125 17 Br 0.072 6.928 18 C -0.074 4.074 19 Cl -0.009 7.009 20 C -0.087 4.087 21 H 0.215 0.785 22 H 0.100 0.900 23 H -0.169 1.169 24 H -0.173 1.173 25 H 0.088 0.912 26 H 0.089 0.911 27 H 0.100 0.900 28 H 0.112 0.888 29 H 0.229 0.771 30 H 0.109 0.891 31 H 0.094 0.906 32 H 0.169 0.831 33 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -0.665 -0.429 3.313 3.406 hybrid contribution 0.053 -1.476 -0.117 1.482 sum -0.612 -1.906 3.196 3.771 Atomic orbital electron populations 1.86742 1.16516 1.33329 1.97016 1.25206 0.85080 1.13447 0.94463 0.92937 0.78789 0.76301 0.87831 1.19794 1.03354 0.90805 0.98072 1.18656 0.93142 0.90489 0.86859 1.86075 1.76947 1.20351 1.38164 1.23000 1.01441 0.77168 0.99244 1.22330 1.00183 0.95631 0.94553 0.87352 1.23072 1.02700 0.93526 0.96480 1.23300 0.92567 0.85431 0.96951 0.89622 1.86526 1.67501 1.48657 1.33847 1.23822 0.99219 0.98070 0.99079 1.21199 1.03785 1.01061 0.92807 1.21605 1.02989 0.92600 0.95324 1.96854 1.86480 1.76710 1.32738 1.20568 1.04028 0.90561 0.92281 1.98415 1.83924 1.73228 1.45361 1.20774 0.96851 1.00269 0.90837 0.78498 0.90014 1.16929 1.17291 0.91171 0.91071 0.89956 0.88765 0.77086 0.89086 0.90605 0.83144 0.83497 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.43 12.65 -35.23 -0.45 -0.88 16 2 C -0.07 -0.01 2.33 36.01 0.08 0.07 16 3 Si 0.74 -0.35 30.40 -169.99 -5.17 -5.52 16 4 C -0.12 -0.17 5.28 -104.47 -0.55 -0.72 16 5 C 0.16 0.11 6.62 -39.23 -0.26 -0.15 16 6 O -0.30 0.18 9.04 -19.49 -0.18 0.00 16 7 C 0.07 -0.15 4.58 37.16 0.17 0.02 16 8 C -0.11 0.30 4.01 -89.80 -0.36 -0.06 16 9 H 0.11 -0.35 8.14 -51.93 -0.42 -0.77 16 10 C -0.12 0.27 7.47 -25.92 -0.19 0.08 16 11 C 0.08 -0.15 5.22 -25.82 -0.13 -0.29 16 12 H 0.09 -0.27 8.14 -51.93 -0.42 -0.70 16 13 O -0.56 0.21 13.67 -35.23 -0.48 -0.27 16 14 C -0.16 0.37 7.47 -25.82 -0.19 0.18 16 15 C -0.17 -0.11 8.78 -39.41 -0.35 -0.45 16 16 C -0.04 -0.09 6.23 -39.50 -0.25 -0.33 16 17 Br -0.01 -0.02 32.52 -68.01 -2.21 -2.24 16 18 C -0.05 -0.12 6.32 -39.46 -0.25 -0.37 16 19 Cl -0.04 -0.10 27.73 -51.86 -1.44 -1.54 16 20 C -0.07 -0.15 8.44 -39.57 -0.33 -0.48 16 21 H 0.37 -0.46 8.60 45.56 0.39 -0.06 16 22 H 0.08 -0.07 7.83 -51.93 -0.41 -0.48 16 23 H -0.24 -0.22 7.11 56.52 0.40 0.18 16 24 H -0.25 -0.45 6.81 56.52 0.38 -0.07 16 25 H 0.07 -0.17 7.35 -51.93 -0.38 -0.55 16 26 H 0.07 -0.22 7.67 -51.93 -0.40 -0.61 16 27 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 28 H 0.09 -0.16 8.10 -51.93 -0.42 -0.58 16 29 H 0.38 -1.62 9.12 45.56 0.42 -1.20 16 30 H 0.09 -0.13 7.90 -51.93 -0.41 -0.54 16 31 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 32 H 0.15 -0.19 6.30 -52.48 -0.33 -0.52 16 33 H 0.15 0.25 4.93 -52.49 -0.26 -0.01 16 LS Contribution 313.04 15.07 4.72 4.72 Total: 0.00 -4.89 313.04 -10.52 -15.41 By element: Atomic # 1 Polarization: -4.48 SS G_CDS: -2.70 Total: -7.19 kcal Atomic # 6 Polarization: 0.12 SS G_CDS: -2.61 Total: -2.49 kcal Atomic # 8 Polarization: -0.04 SS G_CDS: -1.10 Total: -1.15 kcal Atomic # 14 Polarization: -0.35 SS G_CDS: -5.17 Total: -5.52 kcal Atomic # 17 Polarization: -0.10 SS G_CDS: -1.44 Total: -1.54 kcal Atomic # 35 Polarization: -0.02 SS G_CDS: -2.21 Total: -2.24 kcal Total LS contribution 4.72 Total: 4.72 kcal Total: -4.89 -10.52 -15.41 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_15163260_11354858.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.490 kcal (2) G-P(sol) polarization free energy of solvation -4.889 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.379 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.522 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.411 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.901 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds