Wall clock time and date at job start Mon Mar 8 2021 12:53:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86296 * 109.47370 * 2 1 4 4 C 1.50707 * 109.46916 * 119.99986 * 2 1 3 5 5 C 1.38703 * 120.01400 * 74.99521 * 4 2 1 6 6 O 1.35921 * 120.03573 * 0.02562 * 5 4 2 7 7 C 1.42905 * 117.00070 * 180.02562 * 6 5 4 8 8 C 1.52998 * 109.47575 * 179.97438 * 7 6 5 9 9 H 1.08994 * 109.47035 * 179.97438 * 8 7 6 10 10 O 1.42963 * 109.46862 * 299.99621 * 8 7 6 11 11 C 1.43090 * 113.77109 * 178.78936 * 10 8 7 12 12 C 1.53251 * 108.94601 * 302.03420 * 11 10 8 13 13 H 1.09007 * 109.57607 * 294.58344 * 12 11 10 14 14 N 1.46500 * 109.57902 * 174.33074 * 12 11 10 15 15 C 1.34526 * 124.45609 * 299.69782 * 14 12 11 16 16 O 1.21453 * 125.71153 * 0.24319 * 15 14 12 17 17 C 1.47816 * 108.57895 * 180.26545 * 15 14 12 18 18 C 1.40938 * 105.88066 * 359.97438 * 17 15 14 19 19 C 1.38566 * 119.82414 * 179.97438 * 18 17 15 20 20 C 1.38615 * 119.71355 * 0.02562 * 19 18 17 21 21 C 1.38226 * 120.46444 * 359.97438 * 20 19 18 22 22 C 1.38570 * 134.29598 * 180.02562 * 17 15 14 23 23 C 1.34525 * 124.46523 * 119.99704 * 14 12 11 24 24 O 1.21448 * 125.70629 * 359.71349 * 23 14 12 25 25 C 1.53259 * 108.84497 * 54.51944 * 12 11 10 26 26 O 1.42968 * 109.46955 * 59.99418 * 8 7 6 27 27 C 1.38731 * 119.92546 * 180.27703 * 5 4 2 28 28 C 1.38206 * 119.94585 * 359.51649 * 27 5 4 29 29 Br 1.89098 * 119.99009 * 180.23503 * 28 27 5 30 30 C 1.38482 * 120.02415 * 0.46087 * 28 27 5 31 31 Cl 1.73593 * 119.96489 * 179.76712 * 30 28 27 32 32 C 1.38177 * 120.00725 * 255.02138 * 4 2 1 33 33 H 0.96704 * 114.00232 * 179.97438 * 1 2 3 34 34 H 1.09004 * 109.47118 * 239.99033 * 2 1 3 35 35 H 1.48498 * 109.99746 * 179.97438 * 3 2 1 36 36 H 1.48502 * 109.99605 * 301.31656 * 3 2 1 37 37 H 1.08993 * 109.47407 * 59.99226 * 7 6 5 38 38 H 1.09005 * 109.46658 * 299.99913 * 7 6 5 39 39 H 1.09002 * 109.55893 * 182.18569 * 11 10 8 40 40 H 1.09006 * 109.55481 * 61.87114 * 11 10 8 41 41 H 1.07996 * 120.14307 * 179.97438 * 19 18 17 42 42 H 1.08002 * 119.76896 * 179.97438 * 20 19 18 43 43 H 1.07996 * 119.77416 * 180.02562 * 21 20 19 44 44 H 1.07993 * 120.14243 * 0.02562 * 22 17 15 45 45 H 1.09001 * 109.56049 * 65.31863 * 25 12 11 46 46 H 1.09005 * 109.56063 * 185.63909 * 25 12 11 47 47 H 1.07999 * 120.02677 * 179.75546 * 27 5 4 48 48 H 1.08000 * 119.97606 * 359.97438 * 32 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.8694 -2.0940 1.3067 6 8 1.3562 -2.8101 0.2717 7 6 1.3230 -4.2311 0.4193 8 6 0.7165 -4.8604 -0.8365 9 1 0.6916 -5.9442 -0.7240 10 8 -0.6135 -4.3693 -1.0206 11 6 -1.2602 -4.8804 -2.1903 12 6 -0.4178 -4.5248 -3.4201 13 1 -0.4026 -3.4428 -3.5520 14 7 -0.9948 -5.1560 -4.6096 15 6 -1.1459 -6.4832 -4.7694 16 8 -0.8343 -7.3346 -3.9613 17 6 -1.7542 -6.7319 -6.0935 18 6 -1.9403 -5.4625 -6.6769 19 6 -2.5000 -5.3602 -7.9404 20 6 -2.8735 -6.5082 -8.6215 21 6 -2.6910 -7.7532 -8.0493 22 6 -2.1331 -7.8708 -6.7858 23 6 -1.4381 -4.4853 -5.6882 24 8 -1.4280 -3.2787 -5.8260 25 6 1.0102 -5.0390 -3.2075 26 8 1.5127 -4.5177 -1.9734 27 6 2.3270 -2.7457 2.4427 28 6 2.8528 -2.0160 3.4921 29 35 3.4831 -2.9036 5.0383 30 6 2.9141 -0.6348 3.4135 31 17 3.5693 0.2806 4.7350 32 6 2.4532 0.0164 2.2835 33 1 -0.3934 -0.8834 -0.0004 34 1 1.7923 -0.5140 -0.8899 35 1 3.5350 1.7700 0.0006 36 1 1.5355 2.4770 -1.1922 37 1 0.7157 -4.4923 1.2858 38 1 2.3370 -4.6055 0.5602 39 1 -2.2502 -4.4340 -2.2844 40 1 -1.3527 -5.9637 -2.1121 41 1 -2.6454 -4.3901 -8.3922 42 1 -3.3102 -6.4295 -9.6061 43 1 -2.9856 -8.6404 -8.5901 44 1 -1.9941 -8.8460 -6.3431 45 1 1.0038 -6.1283 -3.1680 46 1 1.6441 -4.7059 -4.0293 47 1 2.2759 -3.8227 2.5054 48 1 2.5014 1.0937 2.2241 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_15163260_13594088.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:53:52 Heat of formation + Delta-G solvation = -123.564178 kcal Electronic energy + Delta-G solvation = -42056.479826 eV Core-core repulsion = 36310.763463 eV Total energy + Delta-G solvation = -5745.716363 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 510.005 amu Computer time = 1.87 seconds Orbital eigenvalues (eV) -43.74197 -41.88634 -41.17645 -39.88164 -39.69242 -39.00685 -37.81322 -37.17912 -37.08960 -37.08366 -34.67412 -33.83678 -32.41334 -32.09204 -31.30169 -30.83498 -29.74612 -27.51166 -26.47345 -26.40325 -25.72838 -24.84161 -23.62384 -23.33032 -22.67483 -22.38758 -21.07859 -19.59200 -19.17458 -19.05714 -18.78788 -18.37617 -18.21896 -17.74677 -17.66189 -17.33429 -17.07851 -16.83634 -16.80202 -16.47013 -16.16828 -16.12816 -15.86478 -15.66406 -15.53510 -15.29007 -15.23121 -15.16310 -14.90470 -14.78966 -14.76926 -14.65502 -14.03180 -13.99848 -13.80650 -13.62403 -13.58183 -13.11035 -12.98283 -12.87984 -12.68027 -12.45463 -12.31939 -12.23319 -12.18871 -12.01991 -11.76645 -11.62436 -11.52692 -11.34731 -11.18013 -11.07823 -10.98830 -10.84617 -10.49891 -10.47683 -10.11137 -9.34669 -4.87232 -1.21856 -0.35390 -0.30767 -0.11601 0.32888 0.75567 0.84823 1.04103 1.39420 1.61000 1.66246 1.73487 2.04376 2.11044 2.15270 2.18171 2.32339 2.33221 3.00690 3.11878 3.21291 3.30267 3.31910 3.38153 3.43651 3.62675 3.64319 3.65228 3.71549 3.81989 3.86353 3.89476 3.91949 3.96010 3.99394 4.04161 4.07933 4.11917 4.19212 4.24524 4.27777 4.40457 4.48367 4.52748 4.55037 4.64434 4.64847 4.84466 4.85298 4.94853 5.11614 5.27515 5.33983 5.38736 5.67823 5.91798 5.95089 6.36029 6.62441 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.070 4.070 3 Si 0.737 3.263 4 C -0.116 4.116 5 C 0.153 3.847 6 O -0.286 6.286 7 C 0.073 3.927 8 C 0.245 3.755 9 H 0.089 0.911 10 O -0.369 6.369 11 C 0.049 3.951 12 C 0.075 3.925 13 H 0.130 0.870 14 N -0.570 5.570 15 C 0.576 3.424 16 O -0.460 6.460 17 C -0.143 4.143 18 C -0.140 4.140 19 C -0.042 4.042 20 C -0.092 4.092 21 C -0.093 4.093 22 C -0.041 4.041 23 C 0.576 3.424 24 O -0.451 6.451 25 C 0.048 3.952 26 O -0.370 6.370 27 C -0.171 4.171 28 C -0.044 4.044 29 Br -0.017 7.017 30 C -0.045 4.045 31 Cl -0.038 7.038 32 C -0.056 4.056 33 H 0.370 0.630 34 H 0.082 0.918 35 H -0.247 1.247 36 H -0.250 1.250 37 H 0.095 0.905 38 H 0.093 0.907 39 H 0.111 0.889 40 H 0.075 0.925 41 H 0.145 0.855 42 H 0.146 0.854 43 H 0.145 0.855 44 H 0.144 0.856 45 H 0.076 0.924 46 H 0.110 0.890 47 H 0.149 0.851 48 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.828 -5.528 -4.734 7.808 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.179 4.179 3 Si 0.635 3.365 4 C -0.118 4.118 5 C 0.106 3.894 6 O -0.199 6.199 7 C -0.002 4.002 8 C 0.150 3.850 9 H 0.106 0.894 10 O -0.288 6.288 11 C -0.029 4.029 12 C -0.027 4.027 13 H 0.147 0.853 14 N -0.316 5.316 15 C 0.366 3.634 16 O -0.331 6.331 17 C -0.147 4.147 18 C -0.144 4.144 19 C -0.061 4.061 20 C -0.110 4.110 21 C -0.111 4.111 22 C -0.060 4.060 23 C 0.365 3.635 24 O -0.321 6.321 25 C -0.030 4.030 26 O -0.289 6.289 27 C -0.192 4.192 28 C -0.125 4.125 29 Br 0.069 6.931 30 C -0.075 4.075 31 Cl -0.009 7.009 32 C -0.075 4.075 33 H 0.218 0.782 34 H 0.099 0.901 35 H -0.171 1.171 36 H -0.175 1.175 37 H 0.113 0.887 38 H 0.111 0.889 39 H 0.129 0.871 40 H 0.093 0.907 41 H 0.163 0.837 42 H 0.163 0.837 43 H 0.163 0.837 44 H 0.162 0.838 45 H 0.094 0.906 46 H 0.128 0.872 47 H 0.166 0.834 48 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges -1.744 -3.993 -4.020 5.928 hybrid contribution -0.170 -2.022 -0.930 2.232 sum -1.914 -6.016 -4.949 8.022 Atomic orbital electron populations 1.86728 1.16320 1.33580 1.97050 1.25367 0.85290 1.12826 0.94386 0.93165 0.78983 0.76074 0.88286 1.19792 1.02997 0.90678 0.98345 1.18728 0.93225 0.90754 0.86702 1.86213 1.76927 1.18889 1.37863 1.22999 1.02065 0.79005 0.96173 1.23588 0.78721 0.96479 0.86196 0.89431 1.88236 1.27157 1.70833 1.42616 1.23033 0.96513 1.00504 0.82831 1.22639 0.94959 1.01187 0.83924 0.85252 1.46447 1.58144 1.08748 1.18256 1.18462 0.76792 0.81426 0.86729 1.90815 1.46444 1.47920 1.47915 1.20453 1.03932 0.95155 0.95140 1.20460 1.03908 0.93456 0.96535 1.20878 0.93615 1.00292 0.91266 1.21569 0.97289 0.91671 1.00442 1.21562 0.96504 0.98703 0.94360 1.20859 0.93981 0.97671 0.93481 1.18423 0.76214 0.87438 0.81443 1.90866 1.50363 1.13057 1.77829 1.23038 0.92781 0.99515 0.87636 1.88252 1.49339 1.76599 1.14734 1.21140 1.04262 1.00900 0.92878 1.21573 1.03040 0.92711 0.95192 1.96848 1.86608 1.76805 1.32800 1.20573 1.04049 0.90462 0.92371 1.98416 1.83990 1.73163 1.45302 1.20710 0.96304 1.00110 0.90347 0.78195 0.90089 1.17116 1.17459 0.88730 0.88867 0.87091 0.90684 0.83732 0.83659 0.83678 0.83793 0.90596 0.87241 0.83368 0.82828 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.31 12.65 -35.23 -0.45 -1.76 16 2 C -0.07 -0.12 2.33 36.01 0.08 -0.03 16 3 Si 0.74 0.56 30.17 -169.99 -5.13 -4.57 16 4 C -0.12 -0.16 5.28 -104.47 -0.55 -0.71 16 5 C 0.15 0.16 6.62 -39.23 -0.26 -0.10 16 6 O -0.29 -0.26 8.82 -39.97 -0.35 -0.62 16 7 C 0.07 -0.10 4.83 37.16 0.18 0.08 16 8 C 0.25 -0.10 3.59 37.16 0.13 0.04 16 9 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 10 O -0.37 -0.28 10.43 -63.56 -0.66 -0.94 16 11 C 0.05 0.00 6.33 37.29 0.24 0.23 16 12 C 0.07 0.03 3.08 -67.67 -0.21 -0.18 16 13 H 0.13 0.17 7.59 -51.93 -0.39 -0.23 16 14 N -0.57 -0.30 2.53 -110.22 -0.28 -0.58 16 15 C 0.58 0.36 7.35 -12.45 -0.09 0.27 16 16 O -0.46 -1.00 15.16 5.41 0.08 -0.92 16 17 C -0.14 0.09 6.40 -104.83 -0.67 -0.58 16 18 C -0.14 0.05 6.40 -104.84 -0.67 -0.62 16 19 C -0.04 0.10 10.09 -39.32 -0.40 -0.30 16 20 C -0.09 0.37 10.03 -39.45 -0.40 -0.02 16 21 C -0.09 0.39 10.04 -39.45 -0.40 -0.01 16 22 C -0.04 0.11 10.09 -39.32 -0.40 -0.29 16 23 C 0.58 0.81 8.02 -12.46 -0.10 0.71 16 24 O -0.45 -1.85 17.44 5.41 0.09 -1.75 16 25 C 0.05 0.01 6.32 37.29 0.24 0.24 16 26 O -0.37 -0.44 10.43 -63.56 -0.66 -1.10 16 27 C -0.17 -0.05 8.78 -39.41 -0.35 -0.40 16 28 C -0.04 -0.06 6.22 -39.50 -0.25 -0.31 16 29 Br -0.02 -0.02 32.52 -68.01 -2.21 -2.23 16 30 C -0.05 -0.07 6.32 -39.46 -0.25 -0.32 16 31 Cl -0.04 -0.06 27.73 -51.86 -1.44 -1.50 16 32 C -0.06 -0.05 8.44 -39.57 -0.33 -0.38 16 33 H 0.37 0.39 8.60 45.56 0.39 0.78 16 34 H 0.08 0.18 7.83 -51.93 -0.41 -0.23 16 35 H -0.25 -0.46 7.11 56.52 0.40 -0.06 16 36 H -0.25 -0.89 7.11 56.52 0.40 -0.49 16 37 H 0.09 -0.30 7.65 -51.93 -0.40 -0.70 16 38 H 0.09 -0.27 7.67 -51.93 -0.40 -0.67 16 39 H 0.11 -0.08 8.14 -51.93 -0.42 -0.50 16 40 H 0.08 0.00 6.71 -51.93 -0.35 -0.35 16 41 H 0.14 -0.51 8.06 -52.49 -0.42 -0.93 16 42 H 0.15 -0.93 8.06 -52.49 -0.42 -1.36 16 43 H 0.15 -0.95 8.06 -52.49 -0.42 -1.37 16 44 H 0.14 -0.57 8.06 -52.49 -0.42 -1.00 16 45 H 0.08 0.01 6.63 -51.93 -0.34 -0.33 16 46 H 0.11 -0.04 8.14 -51.93 -0.42 -0.47 16 47 H 0.15 -0.27 6.30 -52.49 -0.33 -0.60 16 48 H 0.15 -0.18 5.13 -52.49 -0.27 -0.45 16 LS Contribution 439.45 15.07 6.62 6.62 Total: 0.00 -8.11 439.45 -13.48 -21.59 By element: Atomic # 1 Polarization: -4.91 SS G_CDS: -4.65 Total: -9.56 kcal Atomic # 6 Polarization: 1.77 SS G_CDS: -4.45 Total: -2.68 kcal Atomic # 7 Polarization: -0.30 SS G_CDS: -0.28 Total: -0.58 kcal Atomic # 8 Polarization: -5.14 SS G_CDS: -1.95 Total: -7.09 kcal Atomic # 14 Polarization: 0.56 SS G_CDS: -5.13 Total: -4.57 kcal Atomic # 17 Polarization: -0.06 SS G_CDS: -1.44 Total: -1.50 kcal Atomic # 35 Polarization: -0.02 SS G_CDS: -2.21 Total: -2.23 kcal Total LS contribution 6.62 Total: 6.62 kcal Total: -8.11 -13.48 -21.59 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_15163260_13594088.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -101.975 kcal (2) G-P(sol) polarization free energy of solvation -8.106 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -110.081 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.483 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.589 kcal (6) G-S(sol) free energy of system = (1) + (5) -123.564 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.87 seconds