Wall clock time and date at job start Mon Mar 8 2021 13:31:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86309 * 1 3 3 C 1.86302 * 109.46793 * 2 1 4 4 C 1.86297 * 109.47217 * 240.00073 * 2 1 3 5 5 C 1.86302 * 109.46814 * 119.99776 * 2 1 3 6 6 O 1.42898 * 109.47039 * 66.15435 * 5 2 1 7 7 C 1.35927 * 116.99817 * 77.74542 * 6 5 2 8 8 C 1.38679 * 120.03779 * 6.20010 * 7 6 5 9 9 C 1.38252 * 119.94592 * 179.97438 * 8 7 6 10 10 Br 1.89108 * 119.98803 * 179.97438 * 9 8 7 11 11 C 1.38432 * 120.02411 * 359.97438 * 9 8 7 12 12 Cl 1.73602 * 119.96380 * 180.02562 * 11 9 8 13 13 C 1.38366 * 120.07644 * 0.04069 * 11 9 8 14 14 C 1.38130 * 120.05285 * 359.97438 * 13 11 9 15 15 C 1.50699 * 120.01432 * 179.97438 * 14 13 11 16 16 O 1.42903 * 109.46849 * 104.99989 * 15 14 13 17 17 Si 1.86300 * 109.46960 * 345.00229 * 15 14 13 18 18 H 1.48502 * 109.47176 * 59.99935 * 17 15 14 19 19 H 1.48497 * 109.46980 * 179.97438 * 17 15 14 20 20 H 1.48498 * 109.47058 * 299.99633 * 17 15 14 21 21 H 1.08994 * 109.47487 * 299.99904 * 1 2 3 22 22 H 1.09001 * 109.46732 * 60.00361 * 1 2 3 23 23 H 1.09001 * 109.46727 * 179.97438 * 1 2 3 24 24 H 1.09003 * 109.46698 * 179.97438 * 3 2 1 25 25 H 1.09000 * 109.47327 * 300.00130 * 3 2 1 26 26 H 1.09005 * 109.47310 * 60.00188 * 3 2 1 27 27 H 1.08998 * 109.47202 * 294.72953 * 4 2 1 28 28 H 1.09003 * 109.46932 * 54.72787 * 4 2 1 29 29 H 1.09001 * 109.47029 * 174.72861 * 4 2 1 30 30 H 1.08998 * 109.47203 * 306.15143 * 5 2 1 31 31 H 1.09000 * 109.46574 * 186.14885 * 5 2 1 32 32 H 1.07994 * 120.03025 * 0.02562 * 8 7 6 33 33 H 1.08000 * 119.97591 * 179.70469 * 13 11 9 34 34 H 1.08997 * 109.47439 * 225.00202 * 15 14 13 35 35 H 0.96699 * 113.99906 * 60.00614 * 16 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8631 0.0000 0.0000 3 6 2.4840 1.7565 0.0000 4 6 2.4841 -0.8782 -1.5211 5 6 2.4840 -0.8782 1.5212 6 8 2.1292 -2.2607 1.4513 7 6 2.8832 -3.0510 0.6423 8 6 4.0178 -2.5378 0.0319 9 6 4.7836 -3.3436 -0.7901 10 35 6.3305 -2.6447 -1.6236 11 6 4.4183 -4.6617 -1.0033 12 17 5.3815 -5.6722 -2.0353 13 6 3.2864 -5.1747 -0.3950 14 6 2.5188 -4.3724 0.4266 15 6 1.2857 -4.9318 1.0882 16 8 1.5522 -5.1648 2.4727 17 14 0.8148 -6.5368 0.2678 18 1 1.9312 -7.5069 0.4007 19 1 -0.3999 -7.0883 0.9201 20 1 0.5379 -6.2947 -1.1709 21 1 -0.3634 0.5138 0.8899 22 1 -0.3633 0.5138 -0.8900 23 1 -0.3633 -1.0277 -0.0005 24 1 3.5740 1.7565 0.0005 25 1 2.1206 2.2704 -0.8900 26 1 2.1207 2.2704 0.8900 27 1 2.1999 -1.9295 -1.4752 28 1 2.0457 -0.4217 -2.4086 29 1 3.5700 -0.7971 -1.5695 30 1 2.0335 -0.4319 2.4077 31 1 3.5684 -0.7838 1.5779 32 1 4.3034 -1.5099 0.1992 33 1 3.0003 -6.2019 -0.5662 34 1 0.4662 -4.2198 0.9907 35 1 1.8041 -4.3707 2.9638 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_15163260_3095236.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 13:31:53 Heat of formation + Delta-G solvation = -82.774283 kcal Electronic energy + Delta-G solvation = -19773.107565 eV Core-core repulsion = 16581.529923 eV Total energy + Delta-G solvation = -3191.577642 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 351.981 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -41.83828 -39.02832 -37.87996 -37.14957 -33.91757 -31.61102 -31.01082 -29.88257 -28.63038 -28.51581 -28.06599 -26.50755 -23.70300 -22.75745 -19.41930 -18.44080 -18.04791 -17.36385 -16.99066 -16.42659 -15.76502 -15.56381 -15.20013 -14.93181 -14.55636 -14.30310 -14.14525 -14.01305 -13.80347 -13.65755 -13.53874 -13.45303 -13.34642 -13.22957 -12.68805 -12.43260 -12.28048 -12.26785 -11.89468 -11.82350 -11.37217 -11.19595 -11.10670 -11.08134 -11.02474 -10.82877 -10.05689 -9.21328 -0.36576 -0.12939 0.32529 1.03126 1.14052 1.23718 1.45053 1.48103 1.51902 1.56242 1.94898 2.10702 2.12621 2.31949 3.32722 3.38333 3.66806 3.83109 3.92162 4.04835 4.15513 4.24659 4.41102 4.51829 4.52503 4.54875 4.58534 4.60489 4.61555 4.63995 4.66946 4.82942 5.11512 5.28444 5.38798 5.42335 5.96898 6.53716 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.443 4.443 2 Si 0.985 3.015 3 C -0.448 4.448 4 C -0.453 4.453 5 C -0.250 4.250 6 O -0.284 6.284 7 C 0.148 3.852 8 C -0.163 4.163 9 C -0.046 4.046 10 Br -0.018 7.018 11 C -0.044 4.044 12 Cl -0.041 7.041 13 C -0.072 4.072 14 C -0.121 4.121 15 C -0.083 4.083 16 O -0.534 6.534 17 Si 1.001 2.999 18 H -0.248 1.248 19 H -0.249 1.249 20 H -0.243 1.243 21 H 0.071 0.929 22 H 0.072 0.928 23 H 0.073 0.927 24 H 0.071 0.929 25 H 0.076 0.924 26 H 0.072 0.928 27 H 0.071 0.929 28 H 0.075 0.925 29 H 0.073 0.927 30 H 0.116 0.884 31 H 0.075 0.925 32 H 0.153 0.847 33 H 0.149 0.851 34 H 0.084 0.916 35 H 0.371 0.629 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.868 3.540 0.450 4.028 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.552 4.552 2 Si 1.182 2.818 3 C -0.556 4.556 4 C -0.560 4.560 5 C -0.370 4.370 6 O -0.196 6.196 7 C 0.101 3.899 8 C -0.183 4.183 9 C -0.127 4.127 10 Br 0.068 6.932 11 C -0.074 4.074 12 Cl -0.012 7.012 13 C -0.091 4.091 14 C -0.123 4.123 15 C -0.191 4.191 16 O -0.339 6.339 17 Si 0.820 3.180 18 H -0.171 1.171 19 H -0.173 1.173 20 H -0.166 1.166 21 H 0.090 0.910 22 H 0.091 0.909 23 H 0.092 0.908 24 H 0.090 0.910 25 H 0.095 0.905 26 H 0.091 0.909 27 H 0.090 0.910 28 H 0.094 0.906 29 H 0.092 0.908 30 H 0.134 0.866 31 H 0.094 0.906 32 H 0.170 0.830 33 H 0.167 0.833 34 H 0.102 0.898 35 H 0.219 0.781 Dipole moment (debyes) X Y Z Total from point charges -1.714 2.283 -0.348 2.876 hybrid contribution 0.388 1.172 0.525 1.342 sum -1.325 3.456 0.176 3.705 Atomic orbital electron populations 1.26007 1.19483 1.04928 1.04740 0.79906 0.68846 0.67244 0.65838 1.26055 1.06444 1.18001 1.05105 1.26465 1.06419 1.08118 1.15032 1.28303 1.06076 0.84262 1.18322 1.86024 1.52517 1.20109 1.60963 1.18699 0.89908 0.90347 0.90972 1.21174 0.95546 1.01357 1.00254 1.21540 0.96337 0.93788 1.01025 1.96843 1.32340 1.85065 1.78941 1.20539 0.96033 0.91080 0.99700 1.98413 1.70016 1.67570 1.65181 1.20857 0.92568 1.00321 0.95329 1.19698 0.99984 0.91510 1.01123 1.25231 0.95078 1.12557 0.86240 1.86712 1.91289 1.37592 1.18331 0.84641 0.80933 0.74128 0.78271 1.17135 1.17305 1.16632 0.91006 0.90874 0.90810 0.90955 0.90493 0.90882 0.90984 0.90580 0.90777 0.86560 0.90619 0.82955 0.83321 0.89753 0.78090 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.44 1.11 8.65 101.05 0.87 1.98 16 2 Si 0.99 -3.77 11.68 -169.99 -1.99 -5.76 16 3 C -0.45 1.45 8.65 101.05 0.87 2.33 16 4 C -0.45 0.90 7.03 101.05 0.71 1.61 16 5 C -0.25 0.82 5.31 101.05 0.54 1.36 16 6 O -0.28 0.35 8.70 -19.51 -0.17 0.18 16 7 C 0.15 -0.02 5.09 -39.23 -0.20 -0.22 16 8 C -0.16 0.04 5.34 -39.41 -0.21 -0.17 16 9 C -0.05 -0.05 6.23 -39.50 -0.25 -0.30 16 10 Br -0.02 -0.02 32.52 -68.01 -2.21 -2.23 16 11 C -0.04 -0.08 6.32 -39.46 -0.25 -0.32 16 12 Cl -0.04 -0.08 27.73 -51.86 -1.44 -1.52 16 13 C -0.07 -0.08 8.44 -39.57 -0.33 -0.41 16 14 C -0.12 -0.07 5.28 -104.47 -0.55 -0.62 16 15 C -0.08 0.00 2.33 36.01 0.08 0.08 16 16 O -0.53 -0.52 12.65 -35.23 -0.45 -0.96 16 17 Si 1.00 0.12 25.74 -169.99 -4.38 -4.26 16 18 H -0.25 -0.18 6.73 56.52 0.38 0.20 16 19 H -0.25 -0.27 7.11 56.52 0.40 0.14 16 20 H -0.24 0.11 7.11 56.52 0.40 0.51 16 21 H 0.07 -0.19 7.96 -51.93 -0.41 -0.61 16 22 H 0.07 -0.17 7.96 -51.93 -0.41 -0.59 16 23 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 24 H 0.07 -0.24 7.96 -51.93 -0.41 -0.65 16 25 H 0.08 -0.22 7.96 -51.93 -0.41 -0.63 16 26 H 0.07 -0.25 7.96 -51.93 -0.41 -0.66 16 27 H 0.07 -0.07 6.24 -51.93 -0.32 -0.39 16 28 H 0.08 -0.16 7.96 -51.93 -0.41 -0.57 16 29 H 0.07 -0.14 6.55 -51.93 -0.34 -0.48 16 30 H 0.12 -0.53 7.96 -51.93 -0.41 -0.94 16 31 H 0.08 -0.30 6.07 -51.93 -0.32 -0.61 16 32 H 0.15 -0.33 4.75 -52.49 -0.25 -0.58 16 33 H 0.15 0.02 4.88 -52.49 -0.26 -0.24 16 34 H 0.08 -0.12 7.83 -51.93 -0.41 -0.53 16 35 H 0.37 -0.47 8.60 45.56 0.39 -0.08 16 LS Contribution 317.29 15.07 4.78 4.78 Total: 0.00 -3.56 317.29 -8.18 -11.74 By element: Atomic # 1 Polarization: -3.66 SS G_CDS: -3.62 Total: -7.29 kcal Atomic # 6 Polarization: 4.03 SS G_CDS: 1.29 Total: 5.32 kcal Atomic # 8 Polarization: -0.17 SS G_CDS: -0.62 Total: -0.79 kcal Atomic # 14 Polarization: -3.65 SS G_CDS: -6.36 Total: -10.01 kcal Atomic # 17 Polarization: -0.08 SS G_CDS: -1.44 Total: -1.52 kcal Atomic # 35 Polarization: -0.02 SS G_CDS: -2.21 Total: -2.23 kcal Total LS contribution 4.78 Total: 4.78 kcal Total: -3.56 -8.18 -11.74 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_15163260_3095236.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -71.037 kcal (2) G-P(sol) polarization free energy of solvation -3.556 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -74.593 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.181 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -11.737 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.774 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds