Wall clock time and date at job start Mon Mar 8 2021 15:05:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.52994 * 109.47385 * 2 1 4 4 C 1.52997 * 109.46968 * 240.00273 * 2 1 3 5 5 O 1.45201 * 109.47220 * 120.00448 * 2 1 3 6 6 C 1.34631 * 117.00188 * 59.99715 * 5 2 1 7 7 O 1.21520 * 120.00002 * 359.97438 * 6 5 2 8 8 N 1.34772 * 120.00267 * 180.02562 * 6 5 2 9 9 C 1.46506 * 120.00033 * 180.02562 * 8 6 5 10 10 H 1.08992 * 112.90684 * 336.24748 * 9 8 6 11 11 C 1.54049 * 113.61276 * 107.61836 * 9 8 6 12 12 C 1.53781 * 87.08031 * 89.07129 * 11 9 8 13 13 H 1.09003 * 113.69043 * 270.86777 * 12 11 9 14 14 C 1.52991 * 113.61611 * 139.97702 * 12 11 9 15 15 O 1.42901 * 109.47409 * 87.50203 * 14 12 11 16 16 C 1.35909 * 117.00220 * 179.97438 * 15 14 12 17 17 C 1.38721 * 120.04495 * 179.72445 * 16 15 14 18 18 C 1.50695 * 120.01395 * 359.97438 * 17 16 15 19 19 O 1.42901 * 109.47173 * 285.00012 * 18 17 16 20 20 Si 1.86298 * 109.47423 * 164.99668 * 18 17 16 21 21 C 1.38166 * 119.96653 * 179.74274 * 17 16 15 22 22 C 1.38268 * 120.06221 * 0.53672 * 21 17 16 23 23 I 2.09511 * 119.95663 * 179.70005 * 22 21 17 24 24 C 1.38428 * 120.09186 * 359.71766 * 22 21 17 25 25 Br 1.89102 * 119.98865 * 180.02562 * 24 22 21 26 26 C 1.38211 * 120.02708 * 0.02562 * 24 22 21 27 27 C 1.53781 * 87.08070 * 25.42738 * 12 11 9 28 28 H 1.09005 * 109.46565 * 300.00198 * 1 2 3 29 29 H 1.08996 * 109.47177 * 59.99028 * 1 2 3 30 30 H 1.09000 * 109.47229 * 180.02562 * 1 2 3 31 31 H 1.09004 * 109.47374 * 180.02562 * 3 2 1 32 32 H 1.08999 * 109.47536 * 300.00135 * 3 2 1 33 33 H 1.09004 * 109.46915 * 60.00231 * 3 2 1 34 34 H 1.09001 * 109.47283 * 300.00289 * 4 2 1 35 35 H 1.09005 * 109.47057 * 59.99675 * 4 2 1 36 36 H 1.08995 * 109.47902 * 179.97438 * 4 2 1 37 37 H 0.97002 * 120.00078 * 359.97438 * 8 6 5 38 38 H 1.09005 * 113.62125 * 334.52173 * 11 9 8 39 39 H 1.08996 * 113.68970 * 203.62749 * 11 9 8 40 40 H 1.08997 * 109.47550 * 207.50008 * 14 12 11 41 41 H 1.09002 * 109.47334 * 327.50277 * 14 12 11 42 42 H 1.09001 * 109.47448 * 44.99511 * 18 17 16 43 43 H 0.96703 * 113.99608 * 299.99563 * 19 18 17 44 44 H 1.48491 * 110.00157 * 179.97438 * 20 18 17 45 45 H 1.48496 * 109.99857 * 301.32190 * 20 18 17 46 46 H 1.08007 * 119.96629 * 180.23056 * 21 17 16 47 47 H 1.08001 * 120.02852 * 179.97438 * 26 24 22 48 48 H 1.09002 * 113.61445 * 89.11830 * 27 12 11 49 49 H 1.09002 * 113.61408 * 219.93560 * 27 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 6 2.0400 -0.7212 -1.2493 5 8 2.0140 -0.6846 1.1855 6 6 1.6523 -1.9723 1.3382 7 8 0.9508 -2.5095 0.5039 8 7 2.0672 -2.6655 2.4170 9 6 1.6740 -4.0670 2.5828 10 1 0.7607 -4.3181 2.0436 11 6 2.8255 -5.0630 2.3476 12 6 3.1498 -4.9202 3.8441 13 1 3.8453 -4.1108 4.0662 14 6 3.5390 -6.2388 4.5153 15 8 4.9450 -6.4497 4.3716 16 6 5.4576 -7.5843 4.9166 17 6 6.8139 -7.8551 4.8092 18 6 7.7201 -6.8914 4.0874 19 8 7.5190 -7.0133 2.6778 20 14 9.4949 -7.2820 4.4975 21 6 7.3342 -9.0064 5.3685 22 6 6.5025 -9.8943 6.0255 23 53 7.2935 -11.6437 6.8642 24 6 5.1479 -9.6292 6.1296 25 35 4.0132 -10.8453 7.0294 26 6 4.6243 -8.4761 5.5761 27 6 1.6742 -4.5377 4.0469 28 1 -0.3632 0.5139 0.8900 29 1 -0.3633 0.5140 -0.8899 30 1 -0.3634 -1.0277 0.0005 31 1 3.1301 1.4424 -0.0005 32 1 1.6768 1.9563 -0.8899 33 1 1.6768 1.9562 0.8900 34 1 1.6766 -1.7488 -1.2494 35 1 1.6766 -0.2073 -2.1392 36 1 3.1299 -0.7209 -1.2496 37 1 2.6269 -2.2367 3.0832 38 1 3.6079 -4.6793 1.6927 39 1 2.4904 -6.0614 2.0669 40 1 3.2845 -6.1964 5.5743 41 1 2.9984 -7.0598 4.0443 42 1 7.4906 -5.8729 4.4003 43 1 7.7051 -7.8957 2.3289 44 1 10.3988 -6.3390 3.7913 45 1 9.7094 -7.1899 5.9640 46 1 8.3908 -9.2154 5.2880 47 1 3.5673 -8.2694 5.6570 48 1 1.0230 -5.3922 4.2310 49 1 1.5270 -3.7309 4.7650 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). I: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_15786356_15734082.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 15:05:54 Heat of formation + Delta-G solvation = -77.581899 kcal Electronic energy + Delta-G solvation = -33247.728301 eV Core-core repulsion = 28469.598996 eV Total energy + Delta-G solvation = -4778.129306 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 539.989 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -42.00661 -41.71960 -40.54308 -38.97927 -37.80425 -37.73664 -35.27826 -34.24622 -33.88440 -32.90230 -31.22388 -29.96642 -28.47469 -28.32420 -28.28276 -26.93750 -26.53047 -25.10788 -23.72730 -22.86310 -22.38843 -21.10457 -20.43884 -19.45384 -19.21594 -18.29229 -17.57905 -17.39892 -17.32513 -17.05129 -16.78731 -16.47608 -16.10164 -16.02903 -15.62860 -15.41028 -15.31864 -15.20590 -15.07383 -14.62876 -14.43655 -14.22131 -14.03514 -13.87823 -13.58606 -13.40794 -13.17288 -13.13174 -12.85662 -12.82411 -12.70003 -12.68793 -12.38923 -12.27072 -12.25296 -12.15714 -11.89549 -11.86654 -11.82634 -11.78711 -11.44850 -11.29439 -11.09318 -10.97406 -10.57829 -10.49801 -10.20335 -10.17232 -9.45990 -5.14243 -0.41530 -0.18790 -0.13494 0.38964 1.14509 1.16454 1.55244 1.80079 1.87095 1.89878 2.06829 3.07894 3.19776 3.25983 3.28801 3.31500 3.54450 3.58419 3.59621 3.66966 3.77999 3.83659 3.96811 3.97509 3.99144 4.07990 4.14647 4.19787 4.29438 4.43418 4.49719 4.50797 4.52111 4.56895 4.60996 4.63514 4.73430 4.75695 4.78609 4.82395 4.87105 4.92049 4.93661 4.96982 5.09172 5.11949 5.32922 5.37112 5.47984 5.60236 6.02757 6.38786 6.51697 7.41386 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.653 3.347 7 O -0.564 6.564 8 N -0.695 5.695 9 C 0.138 3.862 10 H 0.112 0.888 11 C -0.144 4.144 12 C -0.110 4.110 13 H 0.104 0.896 14 C 0.062 3.938 15 O -0.290 6.290 16 C 0.183 3.817 17 C -0.138 4.138 18 C -0.053 4.053 19 O -0.530 6.530 20 Si 0.671 3.329 21 C -0.037 4.037 22 C -0.120 4.120 23 I -0.007 7.007 24 C -0.018 4.018 25 Br -0.016 7.016 26 C -0.182 4.182 27 C -0.135 4.135 28 H 0.060 0.940 29 H 0.072 0.928 30 H 0.087 0.913 31 H 0.067 0.933 32 H 0.082 0.918 33 H 0.067 0.933 34 H 0.087 0.913 35 H 0.072 0.928 36 H 0.060 0.940 37 H 0.407 0.593 38 H 0.079 0.921 39 H 0.096 0.904 40 H 0.069 0.931 41 H 0.071 0.929 42 H 0.118 0.882 43 H 0.377 0.623 44 H -0.247 1.247 45 H -0.251 1.251 46 H 0.148 0.852 47 H 0.148 0.852 48 H 0.103 0.897 49 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.121 0.261 0.660 0.720 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.279 6.279 6 C 0.407 3.593 7 O -0.453 6.453 8 N -0.354 5.354 9 C 0.033 3.967 10 H 0.130 0.870 11 C -0.183 4.183 12 C -0.128 4.128 13 H 0.122 0.878 14 C -0.013 4.013 15 O -0.202 6.202 16 C 0.134 3.866 17 C -0.141 4.141 18 C -0.164 4.164 19 O -0.335 6.335 20 Si 0.572 3.428 21 C -0.058 4.058 22 C -0.263 4.263 23 I 0.142 6.858 24 C -0.101 4.101 25 Br 0.070 6.930 26 C -0.204 4.204 27 C -0.173 4.173 28 H 0.079 0.921 29 H 0.091 0.909 30 H 0.106 0.894 31 H 0.086 0.914 32 H 0.101 0.899 33 H 0.086 0.914 34 H 0.106 0.894 35 H 0.091 0.909 36 H 0.079 0.921 37 H 0.242 0.758 38 H 0.097 0.903 39 H 0.115 0.885 40 H 0.087 0.913 41 H 0.089 0.911 42 H 0.136 0.864 43 H 0.224 0.776 44 H -0.171 1.171 45 H -0.175 1.175 46 H 0.165 0.835 47 H 0.166 0.834 48 H 0.122 0.878 49 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 0.545 -0.501 1.414 1.596 hybrid contribution -0.725 1.673 -0.079 1.825 sum -0.180 1.172 1.335 1.785 Atomic orbital electron populations 1.22524 0.93813 1.05052 1.02728 1.22129 0.94457 0.91554 0.81831 1.21880 1.02353 0.92335 1.03343 1.22523 1.01643 1.03456 0.96520 1.86304 1.71465 1.23365 1.46799 1.18053 0.78603 0.80584 0.82068 1.90923 1.40860 1.70516 1.42955 1.44342 1.55528 1.11633 1.23874 1.21790 0.99111 0.78638 0.97134 0.87007 1.23597 0.98773 1.00199 0.95730 1.22651 0.97026 0.96515 0.96646 0.87822 1.23038 0.78915 0.98320 1.01012 1.86217 1.25195 1.36741 1.72070 1.18709 0.91813 0.85627 0.90420 1.19872 0.92578 0.97807 1.03852 1.24888 1.07200 1.00494 0.83793 1.86578 1.91831 1.36290 1.18787 0.95159 0.75629 0.90047 0.81982 1.20745 0.99165 0.91536 0.94332 1.24308 0.93897 1.00905 1.07165 1.96977 1.83233 1.23812 1.81769 1.21613 0.92917 0.95754 0.99827 1.96869 1.63388 1.57546 1.75161 1.21247 1.01068 0.94706 1.03369 1.23374 0.95321 1.02263 0.96393 0.92128 0.90897 0.89419 0.91387 0.89899 0.91399 0.89406 0.90906 0.92098 0.75832 0.90253 0.88526 0.91325 0.91080 0.86422 0.77617 1.17094 1.17504 0.83521 0.83431 0.87818 0.89863 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.24 8.37 37.16 0.31 0.07 16 2 C 0.14 0.19 1.13 -90.62 -0.10 0.09 16 3 C -0.14 0.08 8.85 37.15 0.33 0.41 16 4 C -0.18 -0.28 8.37 37.16 0.31 0.04 16 5 O -0.36 -0.90 9.94 -40.30 -0.40 -1.30 16 6 C 0.65 1.79 8.06 54.05 0.44 2.22 16 7 O -0.56 -2.84 11.48 -19.29 -0.22 -3.06 16 8 N -0.70 0.19 5.27 -57.79 -0.30 -0.11 16 9 C 0.14 -0.19 4.34 -66.97 -0.29 -0.48 16 10 H 0.11 -0.01 7.46 -51.93 -0.39 -0.40 16 11 C -0.14 0.23 7.44 -25.78 -0.19 0.04 16 12 C -0.11 0.31 3.89 -89.81 -0.35 -0.04 16 13 H 0.10 -0.25 8.14 -51.93 -0.42 -0.67 16 14 C 0.06 -0.15 4.58 37.15 0.17 0.02 16 15 O -0.29 -0.04 9.47 -19.45 -0.18 -0.22 16 16 C 0.18 0.03 6.66 -39.22 -0.26 -0.23 16 17 C -0.14 0.03 5.27 -104.47 -0.55 -0.52 16 18 C -0.05 0.02 2.38 36.00 0.09 0.11 16 19 O -0.53 -0.04 12.88 -35.23 -0.45 -0.50 16 20 Si 0.67 -0.83 29.92 -169.99 -5.09 -5.91 16 21 C -0.04 0.03 8.36 -39.60 -0.33 -0.31 16 22 C -0.12 -0.04 6.20 -39.50 -0.25 -0.29 16 23 I -0.01 0.00 38.57 -73.02 -2.82 -2.82 16 24 C -0.02 -0.01 6.22 -39.52 -0.25 -0.25 16 25 Br -0.02 -0.01 31.96 -68.01 -2.17 -2.18 16 26 C -0.18 0.06 8.78 -39.41 -0.35 -0.28 16 27 C -0.14 0.50 7.38 -25.92 -0.19 0.31 16 28 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 29 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 30 H 0.09 0.30 5.88 -51.93 -0.31 -0.01 16 31 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 32 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 33 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 34 H 0.09 0.32 5.88 -51.93 -0.31 0.01 16 35 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 36 H 0.06 0.08 8.14 -51.93 -0.42 -0.34 16 37 H 0.41 -0.86 8.81 -40.82 -0.36 -1.22 16 38 H 0.08 0.02 8.14 -51.93 -0.42 -0.41 16 39 H 0.10 -0.21 7.89 -51.93 -0.41 -0.62 16 40 H 0.07 -0.24 7.66 -51.93 -0.40 -0.63 16 41 H 0.07 -0.23 7.36 -51.93 -0.38 -0.62 16 42 H 0.12 0.06 7.83 -51.93 -0.41 -0.35 16 43 H 0.38 -1.43 8.70 45.56 0.40 -1.03 16 44 H -0.25 -0.46 7.11 56.52 0.40 -0.05 16 45 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 46 H 0.15 -0.38 5.12 -52.48 -0.27 -0.65 16 47 H 0.15 -0.30 6.30 -52.49 -0.33 -0.63 16 48 H 0.10 -0.50 8.10 -51.93 -0.42 -0.92 16 49 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 LS Contribution 438.39 15.07 6.61 6.61 Total: 0.00 -6.97 438.39 -13.50 -20.46 By element: Atomic # 1 Polarization: -4.86 SS G_CDS: -7.00 Total: -11.87 kcal Atomic # 6 Polarization: 2.36 SS G_CDS: -1.46 Total: 0.90 kcal Atomic # 7 Polarization: 0.19 SS G_CDS: -0.30 Total: -0.11 kcal Atomic # 8 Polarization: -3.82 SS G_CDS: -1.26 Total: -5.08 kcal Atomic # 14 Polarization: -0.83 SS G_CDS: -5.09 Total: -5.91 kcal Atomic # 35 Polarization: -0.01 SS G_CDS: -2.17 Total: -2.18 kcal Atomic # 53 Polarization: 0.00 SS G_CDS: -2.82 Total: -2.82 kcal Total LS contribution 6.61 Total: 6.61 kcal Total: -6.97 -13.50 -20.46 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_15786356_15734082.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.117 kcal (2) G-P(sol) polarization free energy of solvation -6.966 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.083 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.499 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.465 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.582 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds