Wall clock time and date at job start Mon Mar 8 2021 15:30:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 C 1.52998 * 109.47051 * 2 1 4 4 C 1.52999 * 109.47105 * 239.99607 * 2 1 3 5 5 Si 1.86298 * 109.47199 * 119.99649 * 2 1 3 6 6 C 1.86297 * 109.47110 * 300.00071 * 5 2 1 7 7 C 1.86301 * 109.47193 * 180.02562 * 5 2 1 8 8 O 1.63104 * 109.47063 * 59.99999 * 5 2 1 9 9 C 1.42901 * 113.99593 * 179.97438 * 8 5 2 10 10 C 1.53002 * 109.46877 * 180.02562 * 9 8 5 11 11 O 1.42900 * 109.46980 * 64.99977 * 10 9 8 12 12 C 1.35907 * 116.99817 * 180.02562 * 11 10 9 13 13 C 1.38715 * 120.05441 * 0.02562 * 12 11 10 14 14 C 1.38169 * 119.94062 * 179.97438 * 13 12 11 15 15 N 1.48005 * 119.97006 * 179.97438 * 14 13 12 16 16 O 1.21800 * 120.00163 * 0.02562 * 15 14 13 17 17 O 1.21799 * 119.99827 * 179.97438 * 15 14 13 18 18 C 1.38241 * 120.05573 * 359.97438 * 14 13 12 19 19 C 1.38286 * 120.11515 * 359.76098 * 18 14 13 20 20 C 1.38128 * 120.05286 * 0.51435 * 19 18 14 21 21 C 1.50697 * 120.02884 * 179.74578 * 20 19 18 22 22 O 1.42906 * 109.46831 * 254.72696 * 21 20 19 23 23 Si 1.86300 * 109.47007 * 14.72085 * 21 20 19 24 24 H 1.48503 * 109.46942 * 60.00611 * 23 21 20 25 25 H 1.48503 * 109.47276 * 180.02562 * 23 21 20 26 26 H 1.48494 * 109.47372 * 300.00074 * 23 21 20 27 27 H 1.09006 * 109.46726 * 299.99800 * 1 2 3 28 28 H 1.08987 * 109.47273 * 60.00282 * 1 2 3 29 29 H 1.09002 * 109.46682 * 180.02562 * 1 2 3 30 30 H 1.09000 * 109.47365 * 180.02562 * 3 2 1 31 31 H 1.09004 * 109.46650 * 299.99947 * 3 2 1 32 32 H 1.08998 * 109.47451 * 59.99670 * 3 2 1 33 33 H 1.09000 * 109.47298 * 300.00083 * 4 2 1 34 34 H 1.09004 * 109.47089 * 59.99752 * 4 2 1 35 35 H 1.09000 * 109.47213 * 179.97438 * 4 2 1 36 36 H 1.09004 * 109.47141 * 180.02562 * 6 5 2 37 37 H 1.09000 * 109.47204 * 299.99847 * 6 5 2 38 38 H 1.09000 * 109.47255 * 60.00348 * 6 5 2 39 39 H 1.08998 * 109.47249 * 299.99894 * 7 5 2 40 40 H 1.09000 * 109.47129 * 60.00148 * 7 5 2 41 41 H 1.09004 * 109.47343 * 179.97438 * 7 5 2 42 42 H 1.09002 * 109.47735 * 60.00292 * 9 8 5 43 43 H 1.09004 * 109.47421 * 299.99499 * 9 8 5 44 44 H 1.09004 * 109.47153 * 304.99783 * 10 9 8 45 45 H 1.09002 * 109.47543 * 185.00043 * 10 9 8 46 46 H 1.07992 * 120.02762 * 359.95971 * 13 12 11 47 47 H 1.08003 * 119.94175 * 180.02562 * 18 14 13 48 48 H 1.07995 * 119.97780 * 180.28085 * 19 18 14 49 49 H 1.09000 * 109.47374 * 134.72269 * 21 20 19 50 50 H 0.96693 * 114.00047 * 60.00191 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 14 2.1511 -0.8781 1.5212 6 6 1.5301 0.0002 3.0422 7 6 4.0141 -0.8774 1.5216 8 8 1.6074 -2.4159 1.5213 9 6 2.0296 -3.1815 2.6516 10 6 1.4647 -4.5995 2.5468 11 8 2.0331 -5.2560 1.4119 12 6 1.6337 -6.5330 1.1736 13 6 0.7133 -7.1413 2.0144 14 6 0.3084 -8.4395 1.7697 15 7 -0.6732 -9.0894 2.6667 16 8 -1.1240 -8.4798 3.6199 17 8 -1.0308 -10.2336 2.4512 18 6 0.8194 -9.1318 0.6877 19 6 1.7329 -8.5257 -0.1552 20 6 2.1452 -7.2300 0.0884 21 6 3.1450 -6.5721 -0.8272 22 8 4.4184 -6.5171 -0.1810 23 14 3.2894 -7.5589 -2.4008 24 1 1.9661 -7.6160 -3.0723 25 1 4.2752 -6.9109 -3.3028 26 1 3.7424 -8.9365 -2.0814 27 1 -0.3633 0.5138 0.8901 28 1 -0.3633 0.5137 -0.8899 29 1 -0.3633 -1.0277 0.0005 30 1 3.1300 1.4425 -0.0005 31 1 1.6766 1.9563 -0.8900 32 1 1.6767 1.9564 0.8899 33 1 1.6767 -1.7490 -1.2491 34 1 1.6767 -0.2076 -2.1392 35 1 3.1300 -0.7209 -1.2494 36 1 1.8938 -0.5134 3.9323 37 1 1.8934 1.0278 3.0422 38 1 0.4401 0.0001 3.0423 39 1 4.3778 -1.3911 0.6316 40 1 4.3770 0.1504 1.5217 41 1 4.3775 -1.3908 2.4118 42 1 1.6655 -2.7116 3.5653 43 1 3.1185 -3.2254 2.6746 44 1 0.3816 -4.5518 2.4342 45 1 1.7118 -5.1569 3.4504 46 1 0.3138 -6.6008 2.8597 47 1 0.5013 -10.1463 0.4978 48 1 2.1272 -9.0670 -1.0024 49 1 2.8125 -5.5608 -1.0617 50 1 4.7764 -7.3832 0.0571 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_16525086_10264010.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 15:30:08 Heat of formation + Delta-G solvation = -143.841370 kcal Electronic energy + Delta-G solvation = -30905.377466 eV Core-core repulsion = 26638.920448 eV Total energy + Delta-G solvation = -4266.457018 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 357.166 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -43.18699 -41.74800 -39.40627 -37.87284 -37.75380 -37.49911 -36.88764 -33.66830 -32.07671 -30.62994 -29.44407 -29.14748 -28.80891 -27.91092 -27.43652 -25.67633 -25.18388 -23.28907 -22.74419 -20.85422 -20.48063 -19.68629 -18.74478 -18.51098 -18.33619 -18.16741 -17.55030 -17.02961 -16.81766 -16.21146 -16.02958 -15.88186 -15.66187 -15.50915 -15.36719 -14.91783 -14.78307 -14.36754 -14.13793 -14.07578 -13.79149 -13.64709 -13.49957 -13.32921 -13.28673 -13.00671 -12.97719 -12.92154 -12.55897 -12.50707 -12.47853 -12.43180 -12.31821 -12.09743 -12.06842 -11.94501 -11.91070 -11.76388 -11.63094 -11.42845 -10.78490 -10.63190 -10.45828 -10.13430 -9.77666 -1.31417 -0.26220 0.25036 0.34173 0.92089 1.21977 1.33132 1.34762 1.65486 1.74173 1.76483 1.98279 1.98833 2.34407 3.09261 3.14559 3.37151 3.40195 3.48742 3.61755 3.79083 3.85888 3.94565 3.99314 4.06704 4.07068 4.13590 4.30696 4.39210 4.42644 4.46531 4.53343 4.59464 4.63338 4.67178 4.69523 4.71778 4.76320 4.80915 4.92613 4.95059 5.05415 5.06114 5.10256 5.23559 5.29818 5.35615 5.36829 5.43297 5.47497 5.55195 5.93126 6.37786 6.65218 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C -0.374 4.374 3 C -0.137 4.137 4 C -0.134 4.134 5 Si 1.288 2.712 6 C -0.513 4.513 7 C -0.511 4.511 8 O -0.620 6.620 9 C 0.088 3.912 10 C 0.048 3.952 11 O -0.277 6.277 12 C 0.167 3.833 13 C -0.156 4.156 14 C 0.002 3.998 15 N 0.024 4.976 16 O -0.155 6.155 17 O -0.149 6.149 18 C -0.087 4.087 19 C -0.088 4.088 20 C -0.104 4.104 21 C -0.077 4.077 22 O -0.526 6.526 23 Si 0.943 3.057 24 H -0.244 1.244 25 H -0.245 1.245 26 H -0.247 1.247 27 H 0.054 0.946 28 H 0.053 0.947 29 H 0.059 0.941 30 H 0.056 0.944 31 H 0.056 0.944 32 H 0.056 0.944 33 H 0.060 0.940 34 H 0.053 0.947 35 H 0.055 0.945 36 H 0.066 0.934 37 H 0.075 0.925 38 H 0.073 0.927 39 H 0.074 0.926 40 H 0.073 0.927 41 H 0.066 0.934 42 H 0.081 0.919 43 H 0.071 0.929 44 H 0.080 0.920 45 H 0.081 0.919 46 H 0.161 0.839 47 H 0.160 0.840 48 H 0.153 0.847 49 H 0.128 0.872 50 H 0.375 0.625 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.073 1.809 -1.240 3.775 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.191 4.191 2 C -0.418 4.418 3 C -0.194 4.194 4 C -0.191 4.191 5 Si 1.419 2.581 6 C -0.615 4.615 7 C -0.612 4.612 8 O -0.579 6.579 9 C 0.012 3.988 10 C -0.027 4.027 11 O -0.189 6.189 12 C 0.119 3.881 13 C -0.176 4.176 14 C -0.080 4.080 15 N 0.545 4.455 16 O -0.372 6.372 17 O -0.367 6.367 18 C -0.106 4.106 19 C -0.106 4.106 20 C -0.105 4.105 21 C -0.187 4.187 22 O -0.331 6.331 23 Si 0.764 3.236 24 H -0.167 1.167 25 H -0.168 1.168 26 H -0.171 1.171 27 H 0.073 0.927 28 H 0.072 0.928 29 H 0.078 0.922 30 H 0.075 0.925 31 H 0.075 0.925 32 H 0.075 0.925 33 H 0.079 0.921 34 H 0.072 0.928 35 H 0.074 0.926 36 H 0.085 0.915 37 H 0.094 0.906 38 H 0.092 0.908 39 H 0.093 0.907 40 H 0.092 0.908 41 H 0.085 0.915 42 H 0.099 0.901 43 H 0.089 0.911 44 H 0.098 0.902 45 H 0.099 0.901 46 H 0.178 0.822 47 H 0.177 0.823 48 H 0.171 0.829 49 H 0.146 0.854 50 H 0.221 0.779 Dipole moment (debyes) X Y Z Total from point charges 3.516 2.262 -2.769 5.015 hybrid contribution -0.296 -0.040 1.169 1.207 sum 3.219 2.222 -1.600 4.226 Atomic orbital electron populations 1.21513 0.93845 1.01940 1.01812 1.25773 1.00628 1.02630 1.12724 1.21557 1.00811 0.94885 1.02155 1.21509 1.00680 1.00223 0.96696 0.76710 0.63129 0.53196 0.65042 1.27055 1.07042 1.09663 1.17695 1.27024 1.24884 1.04700 1.04638 1.85398 1.79138 1.46103 1.47231 1.22064 0.99571 0.89200 0.87938 1.23241 0.99468 0.92529 0.87484 1.86305 1.63739 1.21721 1.47144 1.18448 0.91807 0.85121 0.92722 1.21105 0.99778 0.94120 1.02549 1.20842 0.97378 0.94561 0.95264 1.43602 1.00296 1.00848 1.00723 1.94562 1.57448 1.65142 1.20010 1.94572 1.62292 1.02073 1.77743 1.20925 0.96002 1.01726 0.91992 1.21032 0.96484 0.93534 0.99581 1.20210 0.99963 0.94130 0.96241 1.25013 0.83286 1.08285 1.02140 1.86617 1.31674 1.34050 1.80712 0.85803 0.82495 0.78762 0.76494 1.16742 1.16786 1.17134 0.92716 0.92777 0.92237 0.92481 0.92486 0.92530 0.92140 0.92828 0.92631 0.91489 0.90592 0.90829 0.90675 0.90756 0.91502 0.90078 0.91052 0.90184 0.90098 0.82181 0.82275 0.82931 0.85414 0.77870 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 0.05 7.85 37.16 0.29 0.34 16 2 C -0.37 0.29 0.53 -90.62 -0.05 0.24 16 3 C -0.14 0.14 7.85 37.16 0.29 0.43 16 4 C -0.13 0.04 7.85 37.16 0.29 0.33 16 5 Si 1.29 -2.26 8.45 -169.99 -1.44 -3.70 16 6 C -0.51 0.83 8.50 101.05 0.86 1.69 16 7 C -0.51 0.55 8.50 101.05 0.86 1.41 16 8 O -0.62 0.43 8.52 -40.09 -0.34 0.08 16 9 C 0.09 -0.20 5.50 37.16 0.20 0.00 16 10 C 0.05 -0.10 5.12 37.16 0.19 0.09 16 11 O -0.28 -0.03 9.44 -24.30 -0.23 -0.26 16 12 C 0.17 -0.02 6.66 -39.22 -0.26 -0.28 16 13 C -0.16 -0.02 8.54 -39.43 -0.34 -0.36 16 14 C 0.00 0.00 6.85 -79.98 -0.55 -0.54 16 15 N 0.02 0.09 4.45 33.95 0.15 0.24 16 16 O -0.16 -0.73 18.45 -29.46 -0.54 -1.27 16 17 O -0.15 -0.70 18.44 -29.46 -0.54 -1.24 16 18 C -0.09 0.06 9.55 -39.56 -0.38 -0.32 16 19 C -0.09 0.17 8.66 -39.60 -0.34 -0.17 16 20 C -0.10 0.11 5.27 -104.47 -0.55 -0.44 16 21 C -0.08 0.12 2.38 36.00 0.09 0.21 16 22 O -0.53 0.52 12.88 -35.23 -0.45 0.07 16 23 Si 0.94 -2.20 25.48 -169.99 -4.33 -6.53 16 24 H -0.24 0.41 7.11 56.52 0.40 0.82 16 25 H -0.24 0.16 7.11 56.52 0.40 0.56 16 26 H -0.25 0.75 6.74 56.52 0.38 1.13 16 27 H 0.05 -0.05 7.79 -51.93 -0.40 -0.46 16 28 H 0.05 0.00 8.14 -51.94 -0.42 -0.42 16 29 H 0.06 -0.01 7.96 -51.93 -0.41 -0.42 16 30 H 0.06 -0.09 7.79 -51.93 -0.40 -0.49 16 31 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 32 H 0.06 -0.09 7.79 -51.93 -0.40 -0.50 16 33 H 0.06 0.00 7.97 -51.93 -0.41 -0.42 16 34 H 0.05 0.00 8.14 -51.93 -0.42 -0.42 16 35 H 0.05 -0.04 7.79 -51.93 -0.40 -0.44 16 36 H 0.07 -0.15 7.48 -51.93 -0.39 -0.53 16 37 H 0.07 -0.12 7.79 -51.93 -0.40 -0.53 16 38 H 0.07 -0.10 7.79 -51.93 -0.40 -0.50 16 39 H 0.07 -0.03 7.79 -51.93 -0.40 -0.44 16 40 H 0.07 -0.10 7.79 -51.93 -0.40 -0.50 16 41 H 0.07 -0.10 7.48 -51.93 -0.39 -0.48 16 42 H 0.08 -0.37 7.22 -51.93 -0.37 -0.75 16 43 H 0.07 -0.21 7.22 -51.93 -0.37 -0.58 16 44 H 0.08 -0.20 7.66 -51.93 -0.40 -0.60 16 45 H 0.08 -0.32 7.66 -51.93 -0.40 -0.72 16 46 H 0.16 -0.17 5.85 -52.49 -0.31 -0.48 16 47 H 0.16 -0.31 7.61 -52.48 -0.40 -0.71 16 48 H 0.15 -0.62 4.89 -52.49 -0.26 -0.87 16 49 H 0.13 -0.18 7.83 -51.93 -0.41 -0.59 16 50 H 0.37 -1.69 8.70 45.56 0.40 -1.29 16 LS Contribution 408.96 15.07 6.16 6.16 Total: 0.00 -6.53 408.96 -8.40 -14.93 By element: Atomic # 1 Polarization: -3.66 SS G_CDS: -7.44 Total: -11.10 kcal Atomic # 6 Polarization: 2.02 SS G_CDS: 0.61 Total: 2.62 kcal Atomic # 7 Polarization: 0.09 SS G_CDS: 0.15 Total: 0.24 kcal Atomic # 8 Polarization: -0.51 SS G_CDS: -2.11 Total: -2.62 kcal Atomic # 14 Polarization: -4.46 SS G_CDS: -5.77 Total: -10.23 kcal Total LS contribution 6.16 Total: 6.16 kcal Total: -6.53 -8.40 -14.93 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_16525086_10264010.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -128.913 kcal (2) G-P(sol) polarization free energy of solvation -6.526 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -135.439 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.402 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.928 kcal (6) G-S(sol) free energy of system = (1) + (5) -143.841 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds