Wall clock time and date at job start Mon Mar 8 2021 14:41:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42890 * 114.00038 * 2 1 4 4 C 1.53000 * 112.85456 * 65.90102 * 3 2 1 5 5 F 1.39902 * 109.46992 * 283.58445 * 4 3 2 6 6 F 1.39903 * 109.46755 * 43.57706 * 4 3 2 7 7 F 1.39893 * 109.47641 * 163.58146 * 4 3 2 8 8 C 1.53778 * 113.61862 * 294.70227 * 3 2 1 9 9 C 1.53774 * 87.08245 * 270.88670 * 8 3 2 10 10 H 1.09000 * 113.61353 * 219.93164 * 9 8 3 11 11 C 1.53004 * 113.61711 * 89.11378 * 9 8 3 12 12 O 1.42897 * 109.47162 * 176.52986 * 11 9 8 13 13 C 1.35906 * 117.00004 * 179.97438 * 12 11 9 14 14 C 1.38751 * 120.02130 * 179.97438 * 13 12 11 15 15 C 1.50702 * 119.96416 * 359.97438 * 14 13 12 16 16 O 1.42903 * 109.46973 * 284.99920 * 15 14 13 17 17 Si 1.86303 * 109.47290 * 165.00311 * 15 14 13 18 18 C 1.38213 * 120.07702 * 180.02562 * 14 13 12 19 19 C 1.38125 * 120.12167 * 0.02562 * 18 14 13 20 20 C 1.38899 * 120.04219 * 359.95693 * 19 18 14 21 21 N 1.40179 * 120.03864 * 180.02562 * 20 19 18 22 22 C 1.35227 * 126.05081 * 359.71094 * 21 20 19 23 23 C 1.35328 * 107.71007 * 179.90139 * 22 21 20 24 24 C 1.39921 * 107.93173 * 0.36330 * 23 22 21 25 25 N 1.30880 * 108.24097 * 359.77520 * 24 23 22 26 26 C 1.38631 * 120.01768 * 359.97438 * 13 12 11 27 27 C 1.53780 * 87.17325 * 334.52146 * 9 8 3 28 28 H 1.08999 * 109.47235 * 56.86191 * 1 2 3 29 29 H 1.09002 * 109.47396 * 176.86335 * 1 2 3 30 30 H 1.08999 * 109.47270 * 296.86399 * 1 2 3 31 31 H 1.09003 * 113.61935 * 156.33261 * 8 3 2 32 32 H 1.09006 * 113.68709 * 25.44212 * 8 3 2 33 33 H 1.08998 * 109.46697 * 56.53132 * 11 9 8 34 34 H 1.09000 * 109.46711 * 296.52970 * 11 9 8 35 35 H 1.08996 * 109.47375 * 45.00248 * 15 14 13 36 36 H 0.96697 * 113.99637 * 180.02562 * 16 15 14 37 37 H 1.48504 * 110.00118 * 59.99760 * 17 15 14 38 38 H 1.48502 * 110.00055 * 181.31840 * 17 15 14 39 39 H 1.08003 * 119.94239 * 179.97438 * 18 14 13 40 40 H 1.08003 * 119.98053 * 179.97438 * 19 18 14 41 41 H 1.07998 * 126.14964 * 0.02562 * 22 21 20 42 42 H 1.07997 * 126.03050 * 180.14079 * 23 22 21 43 43 H 1.07990 * 125.87881 * 179.76853 * 24 23 22 44 44 H 1.07993 * 120.06430 * 359.70348 * 26 13 12 45 45 H 1.09000 * 113.61598 * 140.02123 * 27 9 8 46 46 H 1.08998 * 113.61377 * 270.92474 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 1.7260 2.0824 1.2870 5 9 0.4092 2.5544 1.2656 6 9 1.9010 1.2388 2.3893 7 9 2.6077 3.1642 1.3830 8 6 1.7229 2.1077 -1.2800 9 6 2.9995 1.4812 -1.8652 10 1 3.5962 2.1767 -2.4554 11 6 2.7568 0.1509 -2.5811 12 8 3.9804 -0.3101 -3.1574 13 6 3.9385 -1.4880 -3.8341 14 6 5.0905 -1.9938 -4.4192 15 6 6.3881 -1.2361 -4.3045 16 8 6.3603 -0.1084 -5.1818 17 14 7.8032 -2.3532 -4.7738 18 6 5.0491 -3.1913 -5.1080 19 6 3.8612 -3.8878 -5.2166 20 6 2.7051 -3.3863 -4.6325 21 7 1.4998 -4.0935 -4.7423 22 6 1.3219 -5.2672 -5.3898 23 6 0.0206 -5.6155 -5.2606 24 6 -0.6204 -4.6187 -4.5168 25 7 0.2650 -3.7064 -4.2058 26 6 2.7448 -2.1848 -3.9401 27 6 3.4930 1.3207 -0.4177 28 1 -0.3634 0.5618 -0.8605 29 1 -0.3634 -1.0261 -0.0562 30 1 -0.3634 0.4644 0.9167 31 1 1.7894 3.1870 -1.1431 32 1 0.8114 1.8015 -1.7934 33 1 2.0151 0.2915 -3.3674 34 1 2.3922 -0.5857 -1.8651 35 1 6.5199 -0.8946 -3.2778 36 1 7.1657 0.4263 -5.1605 37 1 7.6353 -2.8257 -6.1716 38 1 9.0912 -1.6273 -4.6343 39 1 5.9470 -3.5829 -5.5630 40 1 3.8314 -4.8232 -5.7557 41 1 2.0821 -5.8272 -5.9141 42 1 -0.4422 -6.5041 -5.6638 43 1 -1.6657 -4.6045 -4.2460 44 1 1.8482 -1.7951 -3.4812 45 1 4.0094 0.3784 -0.2343 46 1 4.0426 2.1852 -0.0454 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_16772184_17321600.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 14:41:12 Heat of formation + Delta-G solvation = -104.595189 kcal Electronic energy + Delta-G solvation = -37053.030538 eV Core-core repulsion = 31691.842589 eV Total energy + Delta-G solvation = -5361.187948 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.133 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -51.16162 -48.70945 -48.59339 -42.55366 -41.77851 -40.94864 -38.71809 -37.69863 -37.10944 -34.57856 -31.95234 -31.30099 -30.75515 -30.19455 -28.31662 -27.40390 -26.89456 -26.50258 -24.17923 -23.63601 -23.08254 -21.75209 -21.55924 -20.54895 -19.91151 -19.60163 -19.43942 -19.19967 -18.48589 -17.75085 -17.37850 -17.31224 -16.95005 -16.81749 -16.55215 -16.19848 -15.91014 -15.72372 -15.64433 -15.53725 -15.48594 -15.21563 -15.08327 -15.06572 -14.81225 -14.77293 -14.58357 -14.32963 -14.19496 -14.08288 -13.83110 -13.72785 -13.45005 -13.36561 -13.26423 -12.85480 -12.78820 -12.50075 -12.27636 -12.02323 -11.98279 -11.76954 -11.73658 -11.65975 -11.12185 -10.85807 -10.39488 -10.16276 -9.56550 -8.97550 -4.97790 -0.29383 0.25665 1.12128 1.27614 1.33514 1.55701 1.56671 1.79700 1.91325 1.94463 2.01362 2.54336 2.56162 2.62677 2.84516 3.23120 3.32356 3.34998 3.45531 3.47901 3.61688 3.69023 3.78423 3.91204 3.97605 4.07381 4.11394 4.14291 4.19471 4.24988 4.26518 4.28760 4.34731 4.40810 4.51834 4.54685 4.57687 4.62624 4.65932 4.68361 4.71095 4.89799 4.93861 5.00809 5.14026 5.22995 5.45505 5.60795 5.62016 6.06656 6.28991 6.51817 6.60775 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.010 3.990 2 O -0.332 6.332 3 C 0.039 3.961 4 C 0.437 3.563 5 F -0.182 7.182 6 F -0.174 7.174 7 F -0.175 7.175 8 C -0.143 4.143 9 C -0.097 4.097 10 H 0.106 0.894 11 C 0.066 3.934 12 O -0.296 6.296 13 C 0.184 3.816 14 C -0.116 4.116 15 C -0.062 4.062 16 O -0.531 6.531 17 Si 0.683 3.317 18 C -0.050 4.050 19 C -0.176 4.176 20 C 0.208 3.792 21 N -0.326 5.326 22 C 0.056 3.944 23 C -0.259 4.259 24 C 0.059 3.941 25 N -0.291 5.291 26 C -0.213 4.213 27 C -0.111 4.111 28 H 0.055 0.945 29 H 0.103 0.897 30 H 0.053 0.947 31 H 0.113 0.887 32 H 0.095 0.905 33 H 0.068 0.932 34 H 0.087 0.913 35 H 0.077 0.923 36 H 0.377 0.623 37 H -0.254 1.254 38 H -0.260 1.260 39 H 0.144 0.856 40 H 0.137 0.863 41 H 0.180 0.820 42 H 0.156 0.844 43 H 0.191 0.809 44 H 0.146 0.854 45 H 0.099 0.901 46 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.582 -2.653 -1.168 2.956 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 O -0.249 6.249 3 C -0.004 4.004 4 C 0.382 3.618 5 F -0.163 7.163 6 F -0.155 7.155 7 F -0.156 7.156 8 C -0.181 4.181 9 C -0.115 4.115 10 H 0.125 0.875 11 C -0.009 4.009 12 O -0.208 6.208 13 C 0.137 3.863 14 C -0.118 4.118 15 C -0.171 4.171 16 O -0.339 6.339 17 Si 0.584 3.416 18 C -0.069 4.069 19 C -0.197 4.197 20 C 0.115 3.885 21 N -0.101 5.101 22 C -0.086 4.086 23 C -0.287 4.287 24 C -0.128 4.128 25 N -0.110 5.110 26 C -0.233 4.233 27 C -0.148 4.148 28 H 0.074 0.926 29 H 0.121 0.879 30 H 0.072 0.928 31 H 0.131 0.869 32 H 0.113 0.887 33 H 0.086 0.914 34 H 0.105 0.895 35 H 0.095 0.905 36 H 0.225 0.775 37 H -0.179 1.179 38 H -0.185 1.185 39 H 0.161 0.839 40 H 0.154 0.846 41 H 0.197 0.803 42 H 0.174 0.826 43 H 0.208 0.792 44 H 0.164 0.836 45 H 0.118 0.882 46 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges 1.167 -1.914 -1.160 2.524 hybrid contribution -0.785 0.622 -0.348 1.060 sum 0.382 -1.292 -1.508 2.022 Atomic orbital electron populations 1.23146 0.79407 1.04465 1.01512 1.88090 1.21195 1.21823 1.93811 1.24099 1.00056 0.86358 0.89876 1.21172 0.74306 0.78717 0.87555 1.93193 1.36936 1.89363 1.96822 1.93222 1.94957 1.70681 1.56655 1.93177 1.68885 1.56992 1.96573 1.23590 0.99640 1.01131 0.93717 1.22048 0.97504 0.96394 0.95575 0.87533 1.22813 0.85217 0.95653 0.97179 1.86089 1.34657 1.34338 1.65734 1.18401 0.92198 0.84923 0.90757 1.18605 0.93183 0.96467 1.03501 1.24574 1.02169 0.93465 0.96919 1.86618 1.42643 1.39746 1.64844 0.95150 0.75832 0.85814 0.84805 1.20716 0.97735 0.93029 0.95394 1.20614 0.90832 1.02725 1.05504 1.17243 0.82406 0.91583 0.97248 1.45904 1.06596 1.16886 1.40757 1.22704 0.99129 0.88510 0.98282 1.21689 0.93432 1.04057 1.09553 1.24152 0.99867 0.91962 0.96857 1.77457 0.88792 1.23639 1.21087 1.20888 0.98837 0.96657 1.06961 1.23305 0.90821 1.05757 0.94890 0.92623 0.87910 0.92803 0.86895 0.88689 0.91422 0.89542 0.90475 0.77506 1.17852 1.18500 0.83865 0.84564 0.80257 0.82599 0.79202 0.83614 0.88214 0.86535 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.33 101.05 1.04 1.03 16 2 O -0.33 -0.22 8.33 -35.23 -0.29 -0.51 16 3 C 0.04 -0.01 0.85 -89.67 -0.08 -0.09 16 4 C 0.44 0.56 2.51 37.16 0.09 0.65 16 5 F -0.18 -0.29 15.38 2.25 0.03 -0.26 16 6 F -0.17 -0.52 17.09 2.25 0.04 -0.48 16 7 F -0.17 -0.23 15.83 2.25 0.04 -0.19 16 8 C -0.14 0.27 6.51 -25.92 -0.17 0.11 16 9 C -0.10 0.13 4.19 -89.81 -0.38 -0.24 16 10 H 0.11 -0.18 8.14 -51.93 -0.42 -0.61 16 11 C 0.07 0.01 4.34 37.16 0.16 0.17 16 12 O -0.30 -0.59 9.46 -19.44 -0.18 -0.78 16 13 C 0.18 0.46 6.66 -39.25 -0.26 0.20 16 14 C -0.12 -0.19 5.31 -104.44 -0.55 -0.75 16 15 C -0.06 -0.03 2.36 36.01 0.09 0.06 16 16 O -0.53 -0.89 12.86 -35.23 -0.45 -1.34 16 17 Si 0.68 -0.78 30.19 -169.99 -5.13 -5.91 16 18 C -0.05 -0.02 8.65 -39.63 -0.34 -0.36 16 19 C -0.18 -0.07 9.45 -39.38 -0.37 -0.44 16 20 C 0.21 0.49 6.69 -83.61 -0.56 -0.06 16 21 N -0.33 -0.86 3.80 -10.71 -0.04 -0.90 16 22 C 0.06 0.02 10.80 -17.09 -0.18 -0.16 16 23 C -0.26 -0.01 10.81 -39.99 -0.43 -0.44 16 24 C 0.06 0.06 12.03 -17.33 -0.21 -0.15 16 25 N -0.29 -0.99 11.87 30.64 0.36 -0.63 16 26 C -0.21 -0.56 8.65 -39.26 -0.34 -0.90 16 27 C -0.11 0.12 6.92 -25.78 -0.18 -0.05 16 28 H 0.06 -0.12 6.60 -51.93 -0.34 -0.46 16 29 H 0.10 -0.19 8.14 -51.93 -0.42 -0.61 16 30 H 0.05 -0.02 6.60 -51.93 -0.34 -0.36 16 31 H 0.11 -0.32 8.06 -51.93 -0.42 -0.73 16 32 H 0.09 -0.24 6.65 -51.93 -0.35 -0.58 16 33 H 0.07 -0.01 7.67 -51.93 -0.40 -0.40 16 34 H 0.09 0.05 5.60 -51.93 -0.29 -0.24 16 35 H 0.08 -0.03 7.82 -51.93 -0.41 -0.44 16 36 H 0.38 -0.85 8.74 45.56 0.40 -0.46 16 37 H -0.25 -0.30 6.74 56.52 0.38 0.08 16 38 H -0.26 -0.25 7.11 56.52 0.40 0.16 16 39 H 0.14 -0.22 4.89 -52.48 -0.26 -0.48 16 40 H 0.14 -0.31 6.74 -52.48 -0.35 -0.66 16 41 H 0.18 -0.55 7.04 -52.49 -0.37 -0.92 16 42 H 0.16 -0.36 8.06 -52.49 -0.42 -0.78 16 43 H 0.19 -0.42 8.06 -52.49 -0.42 -0.85 16 44 H 0.15 0.38 5.93 -52.49 -0.31 0.07 16 45 H 0.10 -0.06 8.10 -51.93 -0.42 -0.48 16 46 H 0.12 -0.24 7.02 -51.93 -0.36 -0.61 16 LS Contribution 385.55 15.07 5.81 5.81 Total: 0.00 -8.38 385.55 -7.62 -16.01 By element: Atomic # 1 Polarization: -4.24 SS G_CDS: -5.13 Total: -9.37 kcal Atomic # 6 Polarization: 1.23 SS G_CDS: -2.67 Total: -1.44 kcal Atomic # 7 Polarization: -1.86 SS G_CDS: 0.32 Total: -1.53 kcal Atomic # 8 Polarization: -1.70 SS G_CDS: -0.93 Total: -2.63 kcal Atomic # 9 Polarization: -1.04 SS G_CDS: 0.11 Total: -0.93 kcal Atomic # 14 Polarization: -0.78 SS G_CDS: -5.13 Total: -5.91 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -8.38 -7.62 -16.01 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_16772184_17321600.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -88.590 kcal (2) G-P(sol) polarization free energy of solvation -8.383 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -96.973 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.622 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.005 kcal (6) G-S(sol) free energy of system = (1) + (5) -104.595 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds