Wall clock time and date at job start Mon Mar 8 2021 15:13:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.38126 * 119.97162 * 2 1 4 4 C 1.50700 * 120.02378 * 359.97438 * 3 2 1 5 5 O 1.42895 * 109.47340 * 120.84922 * 4 3 2 6 6 Si 1.86298 * 109.46756 * 240.85027 * 4 3 2 7 7 C 1.38748 * 119.94978 * 179.97438 * 3 2 1 8 8 O 1.35913 * 120.04049 * 180.02562 * 7 3 2 9 9 C 1.42905 * 116.99829 * 180.02562 * 8 7 3 10 10 C 1.53000 * 109.47020 * 179.97438 * 9 8 7 11 11 H 1.08995 * 109.47339 * 304.99832 * 10 9 8 12 12 C 1.53005 * 109.47034 * 65.00255 * 10 9 8 13 13 C 1.53003 * 109.46790 * 179.97438 * 12 10 9 14 14 C 1.53001 * 109.47098 * 299.99736 * 13 12 10 15 15 H 1.08995 * 109.47110 * 300.00130 * 14 13 12 16 16 O 1.42898 * 109.46903 * 180.02562 * 14 13 12 17 17 C 1.53005 * 109.47085 * 60.00444 * 14 13 12 18 18 C 1.53001 * 109.46761 * 184.99935 * 10 9 8 19 19 C 1.38703 * 119.90874 * 0.28107 * 7 3 2 20 20 C 1.38163 * 119.95606 * 359.42399 * 19 7 3 21 21 C 1.38325 * 120.04432 * 0.57183 * 20 19 7 22 22 Br 1.89094 * 119.95369 * 179.74439 * 21 20 19 23 23 H 1.08996 * 109.47232 * 84.45837 * 1 2 3 24 24 H 1.09001 * 109.46622 * 204.45409 * 1 2 3 25 25 H 1.08994 * 109.47426 * 324.45115 * 1 2 3 26 26 H 1.08999 * 109.47118 * 0.84498 * 4 3 2 27 27 H 0.96707 * 113.99692 * 294.56882 * 5 4 3 28 28 H 1.48509 * 109.99704 * 294.37082 * 6 4 3 29 29 H 1.48494 * 110.00439 * 55.69068 * 6 4 3 30 30 H 1.08998 * 109.46788 * 60.00258 * 9 8 7 31 31 H 1.08995 * 109.47008 * 300.00142 * 9 8 7 32 32 H 1.08997 * 109.46636 * 299.99725 * 12 10 9 33 33 H 1.08997 * 109.47110 * 60.00074 * 12 10 9 34 34 H 1.09000 * 109.46652 * 180.02562 * 13 12 10 35 35 H 1.08997 * 109.47019 * 60.00281 * 13 12 10 36 36 H 0.96705 * 113.99792 * 60.00118 * 16 14 13 37 37 H 1.08997 * 109.46636 * 179.97438 * 17 14 13 38 38 H 1.08998 * 109.46682 * 59.99724 * 17 14 13 39 39 H 1.08997 * 109.47631 * 300.00078 * 18 10 9 40 40 H 1.09000 * 109.47070 * 60.00530 * 18 10 9 41 41 H 1.08000 * 120.01939 * 179.69959 * 19 7 3 42 42 H 1.07996 * 119.97974 * 180.29997 * 20 19 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1971 1.1965 0.0000 4 6 1.4435 2.5016 -0.0006 5 8 1.8030 3.2598 1.1560 6 14 1.8745 3.4668 -1.5347 7 6 3.5845 1.1960 0.0005 8 8 4.2654 2.3723 0.0011 9 6 5.6924 2.2959 0.0010 10 6 6.2788 3.7091 0.0010 11 1 5.8736 4.2706 -0.8408 12 6 5.9112 4.4138 1.3084 13 6 6.4981 5.8268 1.3087 14 6 8.0208 5.7465 1.1832 15 1 8.4257 5.1848 2.0250 16 8 8.5690 7.0662 1.1840 17 6 8.3884 5.0418 -0.1242 18 6 7.8015 3.6294 -0.1247 19 6 4.2757 -0.0065 -0.0048 20 6 3.5817 -1.2012 0.0013 21 6 2.1984 -1.1985 0.0009 22 35 1.2511 -2.8351 0.0021 23 1 -0.3633 0.0992 -1.0228 24 1 -0.3632 -0.9355 0.4254 25 1 -0.3634 0.8361 0.5974 26 1 0.3719 2.3024 0.0142 27 1 1.5320 2.8552 1.9915 28 1 3.3057 3.8617 -1.5008 29 1 1.6020 2.6481 -2.7432 30 1 6.0277 1.7639 -0.8892 31 1 6.0277 1.7630 0.8907 32 1 4.8264 4.4705 1.3980 33 1 6.3164 3.8523 2.1502 34 1 6.2366 6.3286 2.2403 35 1 6.0932 6.3885 0.4669 36 1 8.3749 7.5722 1.9849 37 1 9.4732 4.9851 -0.2138 38 1 7.9835 5.6036 -0.9660 39 1 8.2067 3.0679 0.7170 40 1 8.0633 3.1274 -1.0561 41 1 5.3557 -0.0090 -0.0093 42 1 4.1194 -2.1377 0.0021 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_16926656_16737254.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 15:13:08 Heat of formation + Delta-G solvation = -106.943383 kcal Electronic energy + Delta-G solvation = -24670.871731 eV Core-core repulsion = 21049.193744 eV Total energy + Delta-G solvation = -3621.677987 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.066 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -41.75939 -40.26330 -38.94153 -37.51476 -36.72647 -34.01658 -33.21992 -31.88775 -31.86205 -30.22542 -28.13696 -26.94396 -26.40686 -23.86262 -22.93291 -22.51454 -21.59702 -20.93634 -18.97328 -18.45580 -18.19023 -17.48322 -17.23376 -16.74513 -16.42466 -15.82449 -15.52845 -15.39220 -15.27365 -14.94257 -14.78819 -14.71958 -14.29928 -13.93427 -13.75867 -13.48035 -13.33230 -13.26620 -13.17035 -12.97251 -12.75639 -12.51274 -12.28711 -12.15083 -11.96266 -11.69655 -11.62202 -11.40807 -11.24910 -11.14268 -11.02344 -10.97829 -10.72716 -9.92735 -9.18382 -4.78425 -0.00755 0.03145 0.63988 1.47880 1.73065 2.04035 2.22596 2.39064 3.13069 3.42634 3.48519 3.55100 3.65277 3.70532 3.75407 3.88129 3.95841 4.01879 4.03912 4.14090 4.19296 4.24483 4.26950 4.28145 4.38320 4.42337 4.45932 4.51320 4.56618 4.59131 4.73129 4.84005 4.90157 4.99195 4.99601 5.04391 5.06857 5.10314 5.12885 5.16111 5.30057 5.37854 5.45281 6.22176 6.60537 6.69670 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 C -0.005 4.005 3 C -0.156 4.156 4 C -0.067 4.067 5 O -0.527 6.527 6 Si 0.736 3.264 7 C 0.167 3.833 8 O -0.286 6.286 9 C 0.057 3.943 10 C -0.086 4.086 11 H 0.084 0.916 12 C -0.111 4.111 13 C -0.151 4.151 14 C 0.103 3.897 15 H 0.054 0.946 16 O -0.569 6.569 17 C -0.111 4.111 18 C -0.110 4.110 19 C -0.214 4.214 20 C -0.039 4.039 21 C -0.136 4.136 22 Br -0.043 7.043 23 H 0.084 0.916 24 H 0.084 0.916 25 H 0.080 0.920 26 H 0.077 0.923 27 H 0.361 0.639 28 H -0.231 1.231 29 H -0.260 1.260 30 H 0.063 0.937 31 H 0.066 0.934 32 H 0.081 0.919 33 H 0.062 0.938 34 H 0.067 0.933 35 H 0.072 0.928 36 H 0.379 0.621 37 H 0.073 0.927 38 H 0.072 0.928 39 H 0.068 0.932 40 H 0.072 0.928 41 H 0.138 0.862 42 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.853 0.669 1.352 1.733 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.191 4.191 2 C -0.007 4.007 3 C -0.158 4.158 4 C -0.175 4.175 5 O -0.331 6.331 6 Si 0.634 3.366 7 C 0.120 3.880 8 O -0.199 6.199 9 C -0.018 4.018 10 C -0.105 4.105 11 H 0.103 0.897 12 C -0.148 4.148 13 C -0.189 4.189 14 C 0.044 3.956 15 H 0.072 0.928 16 O -0.375 6.375 17 C -0.148 4.148 18 C -0.148 4.148 19 C -0.234 4.234 20 C -0.059 4.059 21 C -0.215 4.215 22 Br 0.042 6.958 23 H 0.103 0.897 24 H 0.102 0.898 25 H 0.099 0.901 26 H 0.095 0.905 27 H 0.208 0.792 28 H -0.155 1.155 29 H -0.185 1.185 30 H 0.082 0.918 31 H 0.084 0.916 32 H 0.099 0.901 33 H 0.080 0.920 34 H 0.085 0.915 35 H 0.091 0.909 36 H 0.226 0.774 37 H 0.092 0.908 38 H 0.091 0.909 39 H 0.087 0.913 40 H 0.091 0.909 41 H 0.156 0.844 42 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges -0.299 0.500 -0.393 0.703 hybrid contribution 0.341 -1.359 1.550 2.090 sum 0.042 -0.859 1.157 1.442 Atomic orbital electron populations 1.21165 0.89667 1.04520 1.03772 1.19473 0.96657 0.90092 0.94526 1.19497 0.90983 0.95678 1.09672 1.25144 0.99701 0.93058 0.99594 1.86782 1.83200 1.48127 1.14983 0.94056 0.84424 0.86213 0.71948 1.18860 0.91155 0.85322 0.92696 1.86311 1.19905 1.26592 1.87049 1.23015 0.78282 0.98949 1.01589 1.21226 0.95177 0.93886 1.00189 0.89731 1.21511 1.02148 0.94913 0.96243 1.22269 0.95972 0.97801 1.02850 1.21845 0.92151 0.83646 0.97951 0.92798 1.86514 1.78440 1.27046 1.45502 1.21423 1.01483 0.94782 0.97155 1.21473 0.93463 0.97021 1.02796 1.21254 1.00704 0.91475 1.09948 1.20944 0.91963 0.98564 0.94419 1.21598 0.94681 0.91486 1.13758 1.96711 1.75310 1.25935 1.97838 0.89713 0.89763 0.90117 0.90518 0.79213 1.15473 1.18546 0.91848 0.91560 0.90065 0.91973 0.91464 0.90909 0.77364 0.90835 0.90937 0.91292 0.90896 0.84387 0.84475 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 0.07 8.87 36.01 0.32 0.39 16 2 C -0.01 -0.01 5.88 -104.62 -0.62 -0.62 16 3 C -0.16 -0.28 4.54 -104.47 -0.47 -0.76 16 4 C -0.07 -0.03 2.47 36.01 0.09 0.05 16 5 O -0.53 -0.39 12.07 -41.43 -0.50 -0.89 16 6 Si 0.74 0.65 31.48 -169.99 -5.35 -4.70 16 7 C 0.17 0.36 6.10 -39.22 -0.24 0.12 16 8 O -0.29 -0.58 6.26 -25.66 -0.16 -0.74 16 9 C 0.06 -0.02 4.12 37.16 0.15 0.14 16 10 C -0.09 0.04 2.43 -90.62 -0.22 -0.18 16 11 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 12 C -0.11 0.03 5.10 -26.73 -0.14 -0.11 16 13 C -0.15 0.06 5.54 -26.73 -0.15 -0.09 16 14 C 0.10 0.00 3.47 -26.73 -0.09 -0.09 16 15 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 16 O -0.57 -0.72 13.32 -35.23 -0.47 -1.19 16 17 C -0.11 0.00 5.57 -26.75 -0.15 -0.14 16 18 C -0.11 0.15 5.20 -26.75 -0.14 0.01 16 19 C -0.21 -0.23 9.04 -39.44 -0.36 -0.58 16 20 C -0.04 -0.05 9.78 -39.58 -0.39 -0.43 16 21 C -0.14 -0.25 6.22 -39.50 -0.25 -0.50 16 22 Br -0.04 -0.06 31.68 -68.01 -2.15 -2.22 16 23 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 24 H 0.08 -0.04 6.39 -51.93 -0.33 -0.37 16 25 H 0.08 -0.16 6.40 -51.93 -0.33 -0.49 16 26 H 0.08 -0.10 5.40 -51.93 -0.28 -0.38 16 27 H 0.36 -0.68 9.11 45.56 0.42 -0.26 16 28 H -0.23 -0.77 6.23 56.52 0.35 -0.42 16 29 H -0.26 -0.80 7.11 56.52 0.40 -0.40 16 30 H 0.06 -0.06 7.65 -51.93 -0.40 -0.46 16 31 H 0.07 -0.08 7.67 -51.93 -0.40 -0.48 16 32 H 0.08 0.10 7.82 -51.93 -0.41 -0.31 16 33 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 34 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 35 H 0.07 0.05 8.14 -51.93 -0.42 -0.38 16 36 H 0.38 -0.98 9.08 45.56 0.41 -0.56 16 37 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 38 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 39 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 40 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 41 H 0.14 -0.13 6.30 -52.49 -0.33 -0.46 16 42 H 0.14 -0.06 8.06 -52.49 -0.42 -0.48 16 LS Contribution 347.78 15.07 5.24 5.24 Total: 0.00 -5.35 347.78 -11.58 -16.93 By element: Atomic # 1 Polarization: -4.10 SS G_CDS: -5.55 Total: -9.64 kcal Atomic # 6 Polarization: -0.14 SS G_CDS: -2.64 Total: -2.79 kcal Atomic # 8 Polarization: -1.69 SS G_CDS: -1.13 Total: -2.82 kcal Atomic # 14 Polarization: 0.65 SS G_CDS: -5.35 Total: -4.70 kcal Atomic # 35 Polarization: -0.06 SS G_CDS: -2.15 Total: -2.22 kcal Total LS contribution 5.24 Total: 5.24 kcal Total: -5.35 -11.58 -16.93 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_16926656_16737254.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -90.015 kcal (2) G-P(sol) polarization free energy of solvation -5.346 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.361 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.582 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.928 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.943 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds