Wall clock time and date at job start Mon Mar 8 2021 14:14:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 C 1.52995 * 109.47163 * 2 1 4 4 C 1.52994 * 109.47116 * 239.99654 * 2 1 3 5 5 O 1.42909 * 109.46770 * 119.99716 * 2 1 3 6 6 C 1.42897 * 113.99925 * 60.00174 * 5 2 1 7 7 H 1.09003 * 112.85019 * 18.80149 * 6 5 2 8 8 C 1.53778 * 113.61271 * 149.99636 * 6 5 2 9 9 C 1.53783 * 87.08066 * 140.06543 * 8 6 5 10 10 H 1.08995 * 113.61266 * 89.20301 * 9 8 6 11 11 C 1.53004 * 113.61498 * 220.01889 * 9 8 6 12 12 O 1.42895 * 109.46931 * 183.47201 * 11 9 8 13 13 C 1.35958 * 116.99674 * 175.16077 * 12 11 9 14 14 C 1.38866 * 120.05649 * 275.77461 * 13 12 11 15 15 F 1.35098 * 120.05204 * 0.02562 * 14 13 12 16 16 C 1.38443 * 119.89705 * 179.97438 * 14 13 12 17 17 Cl 1.73599 * 119.99894 * 180.02562 * 16 14 13 18 18 C 1.38369 * 120.00402 * 359.97438 * 16 14 13 19 19 C 1.38255 * 120.11026 * 359.78554 * 18 16 14 20 20 C 1.38174 * 120.10912 * 0.46323 * 19 18 16 21 21 C 1.50693 * 120.00892 * 179.79120 * 20 19 18 22 22 O 1.42904 * 109.47058 * 15.97170 * 21 20 19 23 23 Si 1.86307 * 109.47255 * 255.97625 * 21 20 19 24 24 C 1.53784 * 87.17038 * 334.61131 * 9 8 6 25 25 H 1.08998 * 109.46977 * 300.00049 * 1 2 3 26 26 H 1.08993 * 109.46948 * 60.00441 * 1 2 3 27 27 H 1.09001 * 109.47168 * 180.02562 * 1 2 3 28 28 H 1.09000 * 109.47427 * 179.97438 * 3 2 1 29 29 H 1.09002 * 109.46791 * 299.99871 * 3 2 1 30 30 H 1.08999 * 109.47341 * 59.99555 * 3 2 1 31 31 H 1.09001 * 109.47283 * 300.00152 * 4 2 1 32 32 H 1.09002 * 109.47113 * 59.99960 * 4 2 1 33 33 H 1.09000 * 109.46831 * 179.97438 * 4 2 1 34 34 H 1.09000 * 113.61466 * 25.51711 * 8 6 5 35 35 H 1.09000 * 113.61863 * 254.61270 * 8 6 5 36 36 H 1.09003 * 109.46727 * 63.46699 * 11 9 8 37 37 H 1.09000 * 109.47122 * 303.47244 * 11 9 8 38 38 H 1.08001 * 119.94284 * 180.02562 * 18 16 14 39 39 H 1.08002 * 119.94827 * 180.25757 * 19 18 16 40 40 H 1.08998 * 109.47743 * 135.97430 * 21 20 19 41 41 H 0.96702 * 113.99631 * 56.62433 * 22 21 20 42 42 H 1.48498 * 109.99854 * 299.99572 * 23 21 20 43 43 H 1.48502 * 109.99908 * 61.31371 * 23 21 20 44 44 H 1.08997 * 113.61316 * 139.94436 * 24 9 8 45 45 H 1.09002 * 113.61195 * 270.83654 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0063 -0.6736 1.1669 6 6 1.5847 -2.0355 1.2646 7 1 1.2523 -2.4452 0.3108 8 6 2.5837 -2.9378 2.0080 9 6 1.3666 -3.6134 2.6616 10 1 0.9755 -4.4553 2.0905 11 6 1.5700 -3.9429 4.1418 12 8 0.4233 -4.6368 4.6372 13 6 0.4835 -5.0941 5.9162 14 6 1.0825 -6.3166 6.1902 15 9 1.6068 -7.0532 5.1863 16 6 1.1424 -6.7789 7.4938 17 17 1.8912 -8.3065 7.8394 18 6 0.6065 -6.0230 8.5213 19 6 0.0145 -4.8035 8.2494 20 6 -0.0524 -4.3400 6.9495 21 6 -0.7024 -3.0127 6.6551 22 8 -0.8313 -2.2663 7.8669 23 14 -2.3899 -3.2973 5.9187 24 6 0.6045 -2.2993 2.4220 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 0.5137 -0.8900 27 1 -0.3633 -1.0277 0.0005 28 1 3.1300 1.4425 0.0005 29 1 1.6767 1.9562 -0.8900 30 1 1.6767 1.9563 0.8899 31 1 1.6767 -1.7490 -1.2491 32 1 1.6767 -0.2075 -2.1392 33 1 3.1300 -0.7209 -1.2493 34 1 3.2161 -2.3999 2.7143 35 1 3.1487 -3.5983 1.3503 36 1 1.7069 -3.0192 4.7042 37 1 2.4528 -4.5719 4.2561 38 1 0.6542 -6.3844 9.5380 39 1 -0.3992 -4.2137 9.0540 40 1 -0.0871 -2.4554 5.9488 41 1 0.0044 -2.1252 8.3327 42 1 -2.2696 -4.0725 4.6578 43 1 -3.2489 -4.0285 6.8845 44 1 -0.4260 -2.4451 2.0982 45 1 0.6947 -1.5866 3.2418 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_18323484_14598384.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 14:14:20 Heat of formation + Delta-G solvation = -121.286405 kcal Electronic energy + Delta-G solvation = -28841.083391 eV Core-core repulsion = 24573.810060 eV Total energy + Delta-G solvation = -4267.273332 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.123 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -50.07118 -41.54632 -40.84467 -39.16975 -38.14345 -38.00759 -37.13825 -33.92816 -32.38882 -31.46960 -29.33484 -28.41742 -28.29394 -27.10029 -26.66067 -24.22120 -23.50001 -22.98243 -20.90225 -20.70022 -19.52784 -18.79078 -18.48966 -17.88621 -17.70283 -17.26303 -16.68867 -16.58686 -16.33355 -16.21181 -15.97158 -15.80451 -15.49633 -15.04043 -14.57288 -14.52602 -14.25389 -14.08178 -14.05775 -13.63644 -13.53459 -13.45843 -13.34600 -13.17273 -13.03934 -12.82904 -12.70552 -12.65920 -12.41783 -12.21944 -12.17468 -12.04543 -11.86286 -11.73381 -11.56638 -11.36262 -11.27653 -11.03309 -10.37333 -9.96332 -9.76872 -4.89350 -0.46623 -0.33061 0.80400 1.31395 1.75137 1.90602 2.01972 2.35980 2.68408 2.77528 3.27294 3.34160 3.40404 3.50235 3.62986 3.70890 3.73826 3.84195 3.86185 3.92710 3.98237 4.04707 4.09225 4.10065 4.24085 4.32788 4.45320 4.48560 4.54056 4.56870 4.62347 4.71049 4.72267 4.73224 4.74066 4.78922 4.86326 4.89180 4.93199 4.96013 5.07627 5.09413 5.19115 5.27104 5.28724 5.34495 6.13088 6.34314 6.38588 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C 0.105 3.895 3 C -0.139 4.139 4 C -0.180 4.180 5 O -0.361 6.361 6 C 0.063 3.937 7 H 0.092 0.908 8 C -0.127 4.127 9 C -0.110 4.110 10 H 0.104 0.896 11 C 0.075 3.925 12 O -0.317 6.317 13 C 0.077 3.923 14 C 0.093 3.907 15 F -0.116 7.116 16 C -0.067 4.067 17 Cl -0.037 7.037 18 C -0.081 4.081 19 C -0.098 4.098 20 C -0.103 4.103 21 C -0.073 4.073 22 O -0.534 6.534 23 Si 0.757 3.243 24 C -0.148 4.148 25 H 0.066 0.934 26 H 0.066 0.934 27 H 0.058 0.942 28 H 0.063 0.937 29 H 0.070 0.930 30 H 0.064 0.936 31 H 0.059 0.941 32 H 0.068 0.932 33 H 0.065 0.935 34 H 0.093 0.907 35 H 0.077 0.923 36 H 0.062 0.938 37 H 0.060 0.940 38 H 0.152 0.848 39 H 0.155 0.845 40 H 0.083 0.917 41 H 0.367 0.633 42 H -0.236 1.236 43 H -0.257 1.257 44 H 0.074 0.926 45 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.181 4.207 -0.621 4.257 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.066 3.934 3 C -0.196 4.196 4 C -0.237 4.237 5 O -0.280 6.280 6 C 0.005 3.995 7 H 0.110 0.890 8 C -0.164 4.164 9 C -0.128 4.128 10 H 0.123 0.877 11 C 0.001 3.999 12 O -0.234 6.234 13 C 0.032 3.968 14 C 0.072 3.928 15 F -0.094 7.094 16 C -0.095 4.095 17 Cl -0.008 7.008 18 C -0.100 4.100 19 C -0.116 4.116 20 C -0.105 4.105 21 C -0.180 4.180 22 O -0.339 6.339 23 Si 0.653 3.347 24 C -0.186 4.186 25 H 0.085 0.915 26 H 0.085 0.915 27 H 0.077 0.923 28 H 0.082 0.918 29 H 0.089 0.911 30 H 0.083 0.917 31 H 0.078 0.922 32 H 0.087 0.913 33 H 0.084 0.916 34 H 0.112 0.888 35 H 0.096 0.904 36 H 0.081 0.919 37 H 0.078 0.922 38 H 0.169 0.831 39 H 0.173 0.827 40 H 0.101 0.899 41 H 0.215 0.785 42 H -0.160 1.160 43 H -0.181 1.181 44 H 0.093 0.907 45 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -1.305 3.529 -1.056 3.908 hybrid contribution 1.814 -1.276 0.384 2.251 sum 0.510 2.253 -0.672 2.406 Atomic orbital electron populations 1.22472 0.95377 1.02569 1.02980 1.21543 0.93309 0.93242 0.85323 1.21768 1.01977 0.93222 1.02645 1.22475 1.02311 1.00871 0.98041 1.88032 1.73814 1.23233 1.42925 1.23584 0.95501 0.82827 0.97611 0.88987 1.23228 0.96367 0.97324 0.99508 1.22323 0.98657 0.98199 0.93630 0.87744 1.22901 0.86965 0.95626 0.94414 1.86142 1.39971 1.73824 1.23452 1.18187 1.01023 0.91749 0.85876 1.17769 0.99379 0.91463 0.84166 1.91564 1.83808 1.75466 1.58557 1.20991 1.03872 0.91747 0.92855 1.98422 1.80115 1.27310 1.94975 1.21101 0.96285 0.93575 0.99034 1.20984 0.98820 0.95605 0.96228 1.20683 0.98391 0.98581 0.92808 1.25267 1.13306 0.88382 0.91025 1.86772 1.35952 1.74596 1.36553 0.93754 0.73651 0.87551 0.79781 1.23658 0.99173 0.96132 0.99617 0.91541 0.91539 0.92261 0.91810 0.91061 0.91713 0.92236 0.91344 0.91637 0.88841 0.90401 0.91946 0.92175 0.83075 0.82735 0.89922 0.78479 1.16017 1.18144 0.90679 0.88966 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.18 8.38 37.16 0.31 0.49 16 2 C 0.10 -0.03 1.11 -90.62 -0.10 -0.13 16 3 C -0.14 0.09 8.84 37.16 0.33 0.42 16 4 C -0.18 0.16 8.38 37.15 0.31 0.47 16 5 O -0.36 -0.41 10.00 -35.23 -0.35 -0.77 16 6 C 0.06 -0.03 2.82 -25.83 -0.07 -0.10 16 7 H 0.09 -0.10 5.54 -51.93 -0.29 -0.39 16 8 C -0.13 0.11 7.47 -25.92 -0.19 -0.08 16 9 C -0.11 0.07 4.00 -89.80 -0.36 -0.29 16 10 H 0.10 -0.03 8.14 -51.93 -0.42 -0.45 16 11 C 0.07 0.01 5.79 37.16 0.22 0.22 16 12 O -0.32 -0.73 8.50 -19.61 -0.17 -0.90 16 13 C 0.08 0.18 5.37 -39.18 -0.21 -0.03 16 14 C 0.09 0.29 7.28 -39.27 -0.29 0.00 16 15 F -0.12 -0.50 16.68 2.25 0.04 -0.46 16 16 C -0.07 -0.13 6.32 -39.46 -0.25 -0.38 16 17 Cl -0.04 -0.08 28.61 -51.86 -1.48 -1.56 16 18 C -0.08 0.01 9.83 -39.53 -0.39 -0.38 16 19 C -0.10 0.05 9.19 -39.60 -0.36 -0.32 16 20 C -0.10 -0.08 4.46 -104.48 -0.47 -0.54 16 21 C -0.07 0.03 2.49 36.00 0.09 0.12 16 22 O -0.53 0.57 11.51 -35.23 -0.41 0.17 16 23 Si 0.76 0.25 32.40 -169.99 -5.51 -5.26 16 24 C -0.15 0.12 7.48 -25.83 -0.19 -0.08 16 25 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 26 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 27 H 0.06 -0.07 7.02 -51.93 -0.36 -0.43 16 28 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 29 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 30 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 31 H 0.06 -0.07 6.24 -51.93 -0.32 -0.39 16 32 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 33 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 34 H 0.09 -0.06 8.10 -51.93 -0.42 -0.48 16 35 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 36 H 0.06 -0.06 7.34 -51.93 -0.38 -0.44 16 37 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 38 H 0.15 -0.35 8.06 -52.49 -0.42 -0.77 16 39 H 0.16 -0.38 7.06 -52.49 -0.37 -0.75 16 40 H 0.08 -0.12 7.16 -51.93 -0.37 -0.49 16 41 H 0.37 -1.55 8.67 45.56 0.39 -1.15 16 42 H -0.24 -0.62 7.11 56.52 0.40 -0.22 16 43 H -0.26 -0.83 7.11 56.52 0.40 -0.43 16 44 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 45 H 0.09 -0.07 7.92 -51.93 -0.41 -0.48 16 LS Contribution 383.84 15.07 5.78 5.78 Total: 0.00 -4.77 383.84 -10.53 -15.30 By element: Atomic # 1 Polarization: -4.90 SS G_CDS: -6.81 Total: -11.70 kcal Atomic # 6 Polarization: 1.03 SS G_CDS: -1.63 Total: -0.60 kcal Atomic # 8 Polarization: -0.57 SS G_CDS: -0.92 Total: -1.50 kcal Atomic # 9 Polarization: -0.50 SS G_CDS: 0.04 Total: -0.46 kcal Atomic # 14 Polarization: 0.25 SS G_CDS: -5.51 Total: -5.26 kcal Atomic # 17 Polarization: -0.08 SS G_CDS: -1.48 Total: -1.56 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -4.77 -10.53 -15.30 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_18323484_14598384.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -105.985 kcal (2) G-P(sol) polarization free energy of solvation -4.770 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -110.756 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.531 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.301 kcal (6) G-S(sol) free energy of system = (1) + (5) -121.286 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds