Wall clock time and date at job start Mon Mar 8 2021 14:08:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86303 * 1 3 3 C 1.86295 * 109.47501 * 2 1 4 4 C 1.86303 * 109.46964 * 239.99745 * 2 1 3 5 5 C 1.86300 * 109.47012 * 120.00205 * 2 1 3 6 6 O 1.42897 * 109.47369 * 182.86936 * 5 2 1 7 7 C 1.35956 * 117.00226 * 77.90855 * 6 5 2 8 8 C 1.38635 * 120.05803 * 243.90112 * 7 6 5 9 9 C 1.50698 * 120.00446 * 359.97438 * 8 7 6 10 10 O 1.42902 * 109.47276 * 285.78374 * 9 8 7 11 11 Si 1.86297 * 109.47249 * 165.78005 * 9 8 7 12 12 H 1.48505 * 109.47378 * 179.97438 * 11 9 8 13 13 H 1.48501 * 109.47486 * 300.00205 * 11 9 8 14 14 H 1.48504 * 109.47152 * 59.99999 * 11 9 8 15 15 C 1.38224 * 119.99239 * 179.74315 * 8 7 6 16 16 C 1.38211 * 120.10435 * 0.50329 * 15 8 7 17 17 C 1.38406 * 120.11162 * 359.77685 * 16 15 8 18 18 Cl 1.73596 * 119.99533 * 179.97438 * 17 16 15 19 19 C 1.38393 * 120.00631 * 359.96893 * 17 16 15 20 20 F 1.35105 * 120.05174 * 180.02562 * 19 17 16 21 21 H 1.08992 * 109.46927 * 299.99973 * 1 2 3 22 22 H 1.09003 * 109.46699 * 59.99776 * 1 2 3 23 23 H 1.09001 * 109.47306 * 179.97438 * 1 2 3 24 24 H 1.08999 * 109.47274 * 187.91457 * 3 2 1 25 25 H 1.09001 * 109.46787 * 307.91669 * 3 2 1 26 26 H 1.09007 * 109.46772 * 67.91161 * 3 2 1 27 27 H 1.08997 * 109.47138 * 306.34985 * 4 2 1 28 28 H 1.09002 * 109.46948 * 66.35889 * 4 2 1 29 29 H 1.09006 * 109.46663 * 186.35155 * 4 2 1 30 30 H 1.09006 * 109.47291 * 62.86725 * 5 2 1 31 31 H 1.09001 * 109.46966 * 302.86853 * 5 2 1 32 32 H 1.09002 * 109.47286 * 45.78159 * 9 8 7 33 33 H 0.96691 * 114.00120 * 180.02562 * 10 9 8 34 34 H 1.08002 * 119.94843 * 180.25943 * 15 8 7 35 35 H 1.07995 * 119.94507 * 179.74563 * 16 15 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4841 1.7564 0.0000 4 6 2.4840 -0.8783 -1.5211 5 6 2.4840 -0.8783 1.5211 6 8 3.9114 -0.8202 1.5554 7 6 4.4720 0.3500 1.9613 8 6 5.2495 1.0889 1.0829 9 6 5.4744 0.5950 -0.3229 10 8 6.3951 -0.4978 -0.3024 11 14 6.1718 1.9751 -1.3619 12 1 6.3941 1.4882 -2.7472 13 1 5.2151 3.1107 -1.3834 14 1 7.4629 2.4265 -0.7834 15 6 5.8144 2.2811 1.4953 16 6 5.6141 2.7333 2.7859 17 6 4.8435 1.9962 3.6682 18 17 4.5944 2.5666 5.2887 19 6 4.2713 0.8045 3.2585 20 9 3.5184 0.0845 4.1188 21 1 -0.3633 0.5138 0.8899 22 1 -0.3633 0.5139 -0.8900 23 1 -0.3634 -1.0277 -0.0005 24 1 3.5649 1.7596 -0.1415 25 1 2.0098 2.3094 -0.8107 26 1 2.2409 2.2277 0.9523 27 1 2.0308 -1.8679 -1.5797 28 1 2.2165 -0.3030 -2.4075 29 1 3.5681 -0.9778 -1.4661 30 1 2.1632 -1.9198 1.4958 31 1 2.0793 -0.3950 2.4104 32 1 4.5268 0.2637 -0.7477 33 1 6.5874 -0.8665 -1.1753 34 1 6.4165 2.8583 0.8092 35 1 6.0601 3.6631 3.1067 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_18323484_3095236.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 14:08:05 Heat of formation + Delta-G solvation = -118.878645 kcal Electronic energy + Delta-G solvation = -20605.692498 eV Core-core repulsion = 17282.913281 eV Total energy + Delta-G solvation = -3322.779218 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 292.061 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -50.02168 -41.33663 -38.76012 -37.93056 -37.23299 -32.78078 -31.34454 -29.94303 -28.70412 -28.54621 -27.59482 -26.72815 -23.86712 -22.85788 -19.25921 -18.72953 -18.52527 -18.19193 -17.21900 -16.56709 -16.19119 -16.01469 -15.94367 -15.47833 -14.91203 -14.49724 -14.38771 -14.32374 -14.03987 -13.98706 -13.77854 -13.53842 -13.44709 -13.41945 -13.26175 -13.06314 -12.72401 -12.44271 -12.25007 -12.08178 -12.05877 -11.74710 -11.07114 -10.99723 -10.51448 -10.39470 -9.84665 -9.51976 -0.35000 -0.22001 0.87288 0.94696 1.28694 1.34461 1.38556 1.57547 1.63496 1.75411 2.00935 2.37586 2.54238 2.88584 3.21903 3.54817 3.63106 3.86567 3.99503 4.15689 4.30848 4.46909 4.54896 4.55399 4.58138 4.59499 4.59977 4.62029 4.65676 4.76182 4.80892 4.97971 5.22576 5.32547 5.39573 5.44130 6.23556 6.52751 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.445 4.445 2 Si 0.969 3.031 3 C -0.460 4.460 4 C -0.446 4.446 5 C -0.242 4.242 6 O -0.287 6.287 7 C 0.112 3.888 8 C -0.060 4.060 9 C -0.085 4.085 10 O -0.533 6.533 11 Si 0.922 3.078 12 H -0.245 1.245 13 H -0.237 1.237 14 H -0.240 1.240 15 C -0.104 4.104 16 C -0.088 4.088 17 C -0.054 4.054 18 Cl -0.039 7.039 19 C 0.070 3.930 20 F -0.118 7.118 21 H 0.071 0.929 22 H 0.075 0.925 23 H 0.072 0.928 24 H 0.074 0.926 25 H 0.079 0.921 26 H 0.072 0.928 27 H 0.075 0.925 28 H 0.074 0.926 29 H 0.076 0.924 30 H 0.110 0.890 31 H 0.068 0.932 32 H 0.086 0.914 33 H 0.381 0.619 34 H 0.145 0.855 35 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.923 1.845 -4.466 4.919 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.553 4.553 2 Si 1.167 2.833 3 C -0.567 4.567 4 C -0.554 4.554 5 C -0.363 4.363 6 O -0.202 6.202 7 C 0.065 3.935 8 C -0.061 4.061 9 C -0.195 4.195 10 O -0.339 6.339 11 Si 0.743 3.257 12 H -0.169 1.169 13 H -0.160 1.160 14 H -0.163 1.163 15 C -0.122 4.122 16 C -0.107 4.107 17 C -0.082 4.082 18 Cl -0.010 7.010 19 C 0.049 3.951 20 F -0.096 7.096 21 H 0.090 0.910 22 H 0.094 0.906 23 H 0.091 0.909 24 H 0.093 0.907 25 H 0.098 0.902 26 H 0.091 0.909 27 H 0.094 0.906 28 H 0.093 0.907 29 H 0.095 0.905 30 H 0.128 0.872 31 H 0.087 0.913 32 H 0.103 0.897 33 H 0.229 0.771 34 H 0.163 0.837 35 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges -0.568 2.462 -4.160 4.867 hybrid contribution -0.504 -0.554 0.364 0.833 sum -1.071 1.908 -3.796 4.381 Atomic orbital electron populations 1.26013 1.19445 1.04903 1.04945 0.80130 0.68017 0.67819 0.67345 1.26485 1.06690 1.18272 1.05278 1.26139 1.06599 1.08288 1.14410 1.28214 0.81919 1.10701 1.15419 1.86122 1.20228 1.28667 1.85160 1.18347 0.97850 0.88074 0.89213 1.19261 0.99026 0.93337 0.94488 1.24998 0.97643 0.98947 0.97924 1.86554 1.63682 1.49160 1.34475 0.86116 0.82047 0.78367 0.79199 1.16882 1.16011 1.16286 1.21029 0.99207 0.95671 0.96337 1.20928 0.97377 1.00348 0.92040 1.20964 1.02728 0.95206 0.89304 1.98420 1.95566 1.88142 1.18834 1.17817 0.97437 0.91596 0.88201 1.91545 1.73182 1.76515 1.68365 0.90988 0.90598 0.90870 0.90691 0.90213 0.90872 0.90633 0.90715 0.90512 0.87205 0.91324 0.89684 0.77115 0.83735 0.82988 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.44 0.90 8.65 101.05 0.87 1.77 16 2 Si 0.97 -2.20 10.99 -169.99 -1.87 -4.07 16 3 C -0.46 0.71 7.84 101.05 0.79 1.50 16 4 C -0.45 1.00 8.46 101.05 0.85 1.86 16 5 C -0.24 -0.01 5.33 101.05 0.54 0.53 16 6 O -0.29 -0.75 9.01 -19.60 -0.18 -0.92 16 7 C 0.11 0.28 4.64 -39.18 -0.18 0.10 16 8 C -0.06 -0.07 3.30 -104.48 -0.35 -0.42 16 9 C -0.09 0.03 1.72 36.00 0.06 0.10 16 10 O -0.53 -0.09 12.86 -35.23 -0.45 -0.54 16 11 Si 0.92 -1.29 24.47 -169.99 -4.16 -5.45 16 12 H -0.25 0.36 7.11 56.52 0.40 0.77 16 13 H -0.24 0.36 7.11 56.52 0.40 0.76 16 14 H -0.24 0.21 6.76 56.52 0.38 0.59 16 15 C -0.10 0.01 8.66 -39.60 -0.34 -0.34 16 16 C -0.09 0.00 9.83 -39.53 -0.39 -0.39 16 17 C -0.05 -0.10 6.32 -39.46 -0.25 -0.35 16 18 Cl -0.04 -0.08 28.61 -51.86 -1.48 -1.56 16 19 C 0.07 0.22 6.94 -39.27 -0.27 -0.05 16 20 F -0.12 -0.50 15.30 2.25 0.03 -0.46 16 21 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 22 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 23 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 24 H 0.07 -0.10 2.55 -51.93 -0.13 -0.23 16 25 H 0.08 -0.20 7.96 -51.93 -0.41 -0.61 16 26 H 0.07 -0.09 7.96 -51.92 -0.41 -0.50 16 27 H 0.07 -0.17 7.96 -51.93 -0.41 -0.59 16 28 H 0.07 -0.22 7.96 -51.93 -0.41 -0.63 16 29 H 0.08 -0.17 5.99 -51.93 -0.31 -0.48 16 30 H 0.11 -0.13 7.96 -51.93 -0.41 -0.54 16 31 H 0.07 0.02 6.36 -51.93 -0.33 -0.31 16 32 H 0.09 -0.14 2.69 -51.93 -0.14 -0.28 16 33 H 0.38 -1.64 8.74 45.56 0.40 -1.24 16 34 H 0.15 -0.29 4.87 -52.49 -0.26 -0.55 16 35 H 0.15 -0.38 8.06 -52.49 -0.42 -0.80 16 LS Contribution 296.87 15.07 4.47 4.47 Total: 0.00 -4.96 296.87 -5.61 -10.57 By element: Atomic # 1 Polarization: -3.03 SS G_CDS: -3.32 Total: -6.34 kcal Atomic # 6 Polarization: 2.97 SS G_CDS: 1.34 Total: 4.31 kcal Atomic # 8 Polarization: -0.83 SS G_CDS: -0.63 Total: -1.46 kcal Atomic # 9 Polarization: -0.50 SS G_CDS: 0.03 Total: -0.46 kcal Atomic # 14 Polarization: -3.49 SS G_CDS: -6.03 Total: -9.52 kcal Atomic # 17 Polarization: -0.08 SS G_CDS: -1.48 Total: -1.56 kcal Total LS contribution 4.47 Total: 4.47 kcal Total: -4.96 -5.61 -10.57 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_18323484_3095236.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -108.308 kcal (2) G-P(sol) polarization free energy of solvation -4.962 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.270 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.609 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -10.571 kcal (6) G-S(sol) free energy of system = (1) + (5) -118.879 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds