Wall clock time and date at job start Mon Mar 8 2021 14:08:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86303 * 1 3 3 C 1.86295 * 109.47501 * 2 1 4 4 C 1.86303 * 109.46964 * 239.99745 * 2 1 3 5 5 C 1.86300 * 109.47012 * 120.00205 * 2 1 3 6 6 O 1.42897 * 109.47369 * 182.86936 * 5 2 1 7 7 C 1.35956 * 117.00226 * 77.90855 * 6 5 2 8 8 C 1.38635 * 120.05803 * 243.90112 * 7 6 5 9 9 C 1.50698 * 120.00446 * 359.97438 * 8 7 6 10 10 O 1.42902 * 109.47276 * 285.78374 * 9 8 7 11 11 Si 1.86297 * 109.47249 * 165.78005 * 9 8 7 12 12 H 1.48505 * 109.47378 * 179.97438 * 11 9 8 13 13 H 1.48501 * 109.47486 * 300.00205 * 11 9 8 14 14 H 1.48504 * 109.47152 * 59.99999 * 11 9 8 15 15 C 1.38224 * 119.99239 * 179.74315 * 8 7 6 16 16 C 1.38211 * 120.10435 * 0.50329 * 15 8 7 17 17 C 1.38406 * 120.11162 * 359.77685 * 16 15 8 18 18 Cl 1.73596 * 119.99533 * 179.97438 * 17 16 15 19 19 C 1.38393 * 120.00631 * 359.96893 * 17 16 15 20 20 F 1.35105 * 120.05174 * 180.02562 * 19 17 16 21 21 H 1.08992 * 109.46927 * 299.99973 * 1 2 3 22 22 H 1.09003 * 109.46699 * 59.99776 * 1 2 3 23 23 H 1.09001 * 109.47306 * 179.97438 * 1 2 3 24 24 H 1.08999 * 109.47274 * 187.91457 * 3 2 1 25 25 H 1.09001 * 109.46787 * 307.91669 * 3 2 1 26 26 H 1.09007 * 109.46772 * 67.91161 * 3 2 1 27 27 H 1.08997 * 109.47138 * 306.34985 * 4 2 1 28 28 H 1.09002 * 109.46948 * 66.35889 * 4 2 1 29 29 H 1.09006 * 109.46663 * 186.35155 * 4 2 1 30 30 H 1.09006 * 109.47291 * 62.86725 * 5 2 1 31 31 H 1.09001 * 109.46966 * 302.86853 * 5 2 1 32 32 H 1.09002 * 109.47286 * 45.78159 * 9 8 7 33 33 H 0.96691 * 114.00120 * 180.02562 * 10 9 8 34 34 H 1.08002 * 119.94843 * 180.25943 * 15 8 7 35 35 H 1.07995 * 119.94507 * 179.74563 * 16 15 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4841 1.7564 0.0000 4 6 2.4840 -0.8783 -1.5211 5 6 2.4840 -0.8783 1.5211 6 8 3.9114 -0.8202 1.5554 7 6 4.4720 0.3500 1.9613 8 6 5.2495 1.0889 1.0829 9 6 5.4744 0.5950 -0.3229 10 8 6.3951 -0.4978 -0.3024 11 14 6.1718 1.9751 -1.3619 12 1 6.3941 1.4882 -2.7472 13 1 5.2151 3.1107 -1.3834 14 1 7.4629 2.4265 -0.7834 15 6 5.8144 2.2811 1.4953 16 6 5.6141 2.7333 2.7859 17 6 4.8435 1.9962 3.6682 18 17 4.5944 2.5666 5.2887 19 6 4.2713 0.8045 3.2585 20 9 3.5184 0.0845 4.1188 21 1 -0.3633 0.5138 0.8899 22 1 -0.3633 0.5139 -0.8900 23 1 -0.3634 -1.0277 -0.0005 24 1 3.5649 1.7596 -0.1415 25 1 2.0098 2.3094 -0.8107 26 1 2.2409 2.2277 0.9523 27 1 2.0308 -1.8679 -1.5797 28 1 2.2165 -0.3030 -2.4075 29 1 3.5681 -0.9778 -1.4661 30 1 2.1632 -1.9198 1.4958 31 1 2.0793 -0.3950 2.4104 32 1 4.5268 0.2637 -0.7477 33 1 6.5874 -0.8665 -1.1753 34 1 6.4165 2.8583 0.8092 35 1 6.0601 3.6631 3.1067 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_18323484_3095236.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 14:08:04 Heat of formation + Delta-G solvation = -112.606060 kcal Electronic energy + Delta-G solvation = -20605.420498 eV Core-core repulsion = 17282.913281 eV Total energy + Delta-G solvation = -3322.507218 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 292.061 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -50.24125 -41.38196 -38.82969 -37.94633 -37.27036 -32.80439 -31.39555 -29.79186 -28.53867 -28.37052 -27.57945 -26.71227 -23.92359 -22.89278 -19.33058 -18.68187 -18.58966 -18.28767 -17.35034 -16.62057 -16.20582 -16.07782 -15.89442 -15.51582 -14.81407 -14.57201 -14.32266 -14.19490 -14.03087 -13.94537 -13.64441 -13.47872 -13.28512 -13.24488 -13.12849 -12.98753 -12.70279 -12.47234 -12.24478 -12.02865 -12.00073 -11.69946 -10.91176 -10.83112 -10.51830 -10.29145 -9.94350 -9.56203 -0.42025 -0.27968 0.76194 1.06470 1.43937 1.50304 1.50995 1.72405 1.82638 1.88733 2.00641 2.50896 2.52040 2.79974 3.28404 3.53453 3.66731 3.94441 4.02992 4.16663 4.33950 4.42102 4.58195 4.67282 4.69549 4.74282 4.77261 4.77829 4.79712 4.84245 4.90881 4.97570 5.22122 5.49460 5.56322 5.64915 6.17345 6.81529 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.453 4.453 2 Si 1.019 2.981 3 C -0.472 4.472 4 C -0.453 4.453 5 C -0.266 4.266 6 O -0.303 6.303 7 C 0.101 3.899 8 C -0.068 4.068 9 C -0.096 4.096 10 O -0.554 6.554 11 Si 0.945 3.055 12 H -0.242 1.242 13 H -0.233 1.233 14 H -0.246 1.246 15 C -0.103 4.103 16 C -0.083 4.083 17 C -0.063 4.063 18 Cl -0.045 7.045 19 C 0.045 3.955 20 F -0.133 7.133 21 H 0.067 0.933 22 H 0.082 0.918 23 H 0.074 0.926 24 H 0.073 0.927 25 H 0.091 0.909 26 H 0.066 0.934 27 H 0.076 0.924 28 H 0.086 0.914 29 H 0.076 0.924 30 H 0.114 0.886 31 H 0.058 0.942 32 H 0.095 0.905 33 H 0.398 0.602 34 H 0.167 0.833 35 H 0.179 0.821 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.619 2.662 -5.931 6.530 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.561 4.561 2 Si 1.213 2.787 3 C -0.579 4.579 4 C -0.562 4.562 5 C -0.383 4.383 6 O -0.219 6.219 7 C 0.055 3.945 8 C -0.069 4.069 9 C -0.204 4.204 10 O -0.362 6.362 11 Si 0.764 3.236 12 H -0.165 1.165 13 H -0.155 1.155 14 H -0.170 1.170 15 C -0.120 4.120 16 C -0.101 4.101 17 C -0.091 4.091 18 Cl -0.016 7.016 19 C 0.024 3.976 20 F -0.111 7.111 21 H 0.086 0.914 22 H 0.101 0.899 23 H 0.093 0.907 24 H 0.092 0.908 25 H 0.110 0.890 26 H 0.085 0.915 27 H 0.095 0.905 28 H 0.105 0.895 29 H 0.095 0.905 30 H 0.132 0.868 31 H 0.077 0.923 32 H 0.112 0.888 33 H 0.249 0.751 34 H 0.184 0.816 35 H 0.196 0.804 Dipole moment (debyes) X Y Z Total from point charges -0.264 3.259 -5.610 6.493 hybrid contribution -0.592 -0.851 0.830 1.328 sum -0.856 2.408 -4.780 5.420 Atomic orbital electron populations 1.26101 1.19808 1.05110 1.05087 0.79393 0.67161 0.66648 0.65461 1.26612 1.06812 1.19056 1.05451 1.26194 1.06642 1.08576 1.14773 1.28707 0.80947 1.11639 1.17011 1.86065 1.21424 1.29155 1.85247 1.18531 0.98353 0.88302 0.89306 1.19583 0.98481 0.93597 0.95203 1.25235 0.98338 0.99623 0.97193 1.86503 1.63830 1.49589 1.36324 0.85801 0.81420 0.77617 0.78751 1.16545 1.15519 1.16985 1.21351 0.98702 0.95362 0.96627 1.21257 0.96359 1.00824 0.91673 1.21115 1.03358 0.95219 0.89386 1.98410 1.95680 1.88107 1.19420 1.18110 0.98459 0.92397 0.88592 1.91493 1.73760 1.77003 1.68875 0.91353 0.89936 0.90674 0.90810 0.88954 0.91487 0.90478 0.89538 0.90527 0.86758 0.92339 0.88785 0.75129 0.81569 0.80412 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 1.83 8.65 113.37 0.98 2.81 16 2 Si 1.02 -4.43 10.99 68.60 0.75 -3.68 16 3 C -0.47 1.53 7.84 113.37 0.89 2.42 16 4 C -0.45 2.32 8.46 113.37 0.96 3.28 16 5 C -0.27 -0.45 5.33 113.37 0.60 0.15 16 6 O -0.30 -2.07 9.01 -93.05 -0.84 -2.91 16 7 C 0.10 0.65 4.64 22.53 0.10 0.75 16 8 C -0.07 -0.17 3.30 -19.77 -0.07 -0.24 16 9 C -0.10 0.11 1.72 71.24 0.12 0.23 16 10 O -0.55 -0.17 12.86 -148.98 -1.92 -2.09 16 11 Si 0.94 -3.89 24.47 68.60 1.68 -2.21 16 12 H -0.24 1.11 7.11 99.48 0.71 1.82 16 13 H -0.23 1.13 7.11 99.48 0.71 1.83 16 14 H -0.25 0.76 6.76 99.48 0.67 1.43 16 15 C -0.10 0.07 8.66 22.26 0.19 0.26 16 16 C -0.08 0.03 9.83 22.30 0.22 0.25 16 17 C -0.06 -0.30 6.32 22.35 0.14 -0.16 16 18 Cl -0.05 -0.23 28.61 -2.72 -0.08 -0.31 16 19 C 0.05 0.36 6.94 22.47 0.16 0.52 16 20 F -0.13 -1.46 15.30 44.97 0.69 -0.78 16 21 H 0.07 -0.21 7.96 -2.39 -0.02 -0.23 16 22 H 0.08 -0.42 7.96 -2.39 -0.02 -0.44 16 23 H 0.07 -0.33 7.96 -2.39 -0.02 -0.34 16 24 H 0.07 -0.21 2.55 -2.39 -0.01 -0.22 16 25 H 0.09 -0.55 7.96 -2.39 -0.02 -0.57 16 26 H 0.07 -0.12 7.96 -2.38 -0.02 -0.14 16 27 H 0.08 -0.40 7.96 -2.39 -0.02 -0.41 16 28 H 0.09 -0.63 7.96 -2.39 -0.02 -0.64 16 29 H 0.08 -0.37 5.99 -2.38 -0.01 -0.38 16 30 H 0.11 -0.06 7.96 -2.38 -0.02 -0.08 16 31 H 0.06 0.18 6.36 -2.39 -0.02 0.17 16 32 H 0.09 -0.34 2.69 -2.39 -0.01 -0.35 16 33 H 0.40 -3.53 8.74 -74.06 -0.65 -4.18 16 34 H 0.17 -0.92 4.87 -2.91 -0.01 -0.93 16 35 H 0.18 -1.11 8.06 -2.91 -0.02 -1.13 16 Total: 0.00 -12.30 296.87 5.80 -6.50 By element: Atomic # 1 Polarization: -6.02 SS G_CDS: 1.21 Total: -4.81 kcal Atomic # 6 Polarization: 5.96 SS G_CDS: 4.30 Total: 10.27 kcal Atomic # 8 Polarization: -2.24 SS G_CDS: -2.75 Total: -5.00 kcal Atomic # 9 Polarization: -1.46 SS G_CDS: 0.69 Total: -0.78 kcal Atomic # 14 Polarization: -8.32 SS G_CDS: 2.43 Total: -5.88 kcal Atomic # 17 Polarization: -0.23 SS G_CDS: -0.08 Total: -0.31 kcal Total: -12.30 5.80 -6.50 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_18323484_3095236.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.103 kcal (2) G-P(sol) polarization free energy of solvation -12.303 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -118.406 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 5.800 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -6.503 kcal (6) G-S(sol) free energy of system = (1) + (5) -112.606 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds