Wall clock time and date at job start Mon Mar 8 2021 15:16:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.53003 * 109.47029 * 2 1 4 4 C 1.52997 * 109.47549 * 239.99879 * 2 1 3 5 5 O 1.45198 * 109.46967 * 119.99614 * 2 1 3 6 6 C 1.34638 * 117.00009 * 60.00432 * 5 2 1 7 7 O 1.21515 * 119.99687 * 359.97438 * 6 5 2 8 8 N 1.34771 * 120.00305 * 180.02562 * 6 5 2 9 9 C 1.46502 * 120.00170 * 180.02562 * 8 6 5 10 10 H 1.08994 * 112.90436 * 336.24550 * 9 8 6 11 11 C 1.53777 * 113.61726 * 107.50148 * 9 8 6 12 12 C 1.53783 * 87.08231 * 89.11340 * 11 9 8 13 13 H 1.08996 * 113.69156 * 270.87620 * 12 11 9 14 14 C 1.53007 * 113.61254 * 139.97922 * 12 11 9 15 15 O 1.42899 * 109.46699 * 87.50510 * 14 12 11 16 16 C 1.35978 * 116.99807 * 179.97438 * 15 14 12 17 17 C 1.38648 * 119.98792 * 179.97438 * 16 15 14 18 18 C 1.50703 * 119.95861 * 359.95898 * 17 16 15 19 19 O 1.42899 * 109.47104 * 75.01708 * 18 17 16 20 20 Si 1.86299 * 109.47000 * 195.02014 * 18 17 16 21 21 C 1.38263 * 120.08689 * 179.97438 * 17 16 15 22 22 C 1.38488 * 120.09780 * 359.97438 * 21 17 16 23 23 O 1.36600 * 131.46956 * 180.02562 * 22 21 17 24 24 C 1.43991 * 105.47342 * 197.27119 * 23 22 21 25 25 O 1.43988 * 103.74510 * 332.86174 * 24 23 22 26 26 C 1.36501 * 105.50127 * 27.15080 * 25 24 23 27 27 C 1.38485 * 131.47796 * 162.99058 * 26 25 24 28 28 C 1.53782 * 87.08088 * 25.43229 * 12 11 9 29 29 H 1.08995 * 109.47128 * 300.00102 * 1 2 3 30 30 H 1.09004 * 109.46613 * 60.00277 * 1 2 3 31 31 H 1.08997 * 109.47028 * 179.97438 * 1 2 3 32 32 H 1.08997 * 109.47138 * 179.97438 * 3 2 1 33 33 H 1.08996 * 109.46867 * 299.99418 * 3 2 1 34 34 H 1.09000 * 109.47073 * 59.99522 * 3 2 1 35 35 H 1.09001 * 109.46897 * 299.99894 * 4 2 1 36 36 H 1.09007 * 109.46957 * 59.99872 * 4 2 1 37 37 H 1.08997 * 109.47109 * 180.02562 * 4 2 1 38 38 H 0.97001 * 119.99768 * 359.97438 * 8 6 5 39 39 H 1.09002 * 113.61101 * 334.56936 * 11 9 8 40 40 H 1.09005 * 113.61263 * 203.66318 * 11 9 8 41 41 H 1.09004 * 109.46865 * 327.50459 * 14 12 11 42 42 H 1.08999 * 109.47131 * 207.50499 * 14 12 11 43 43 H 1.08996 * 109.46863 * 315.02090 * 18 17 16 44 44 H 0.96697 * 114.00324 * 179.97438 * 19 18 17 45 45 H 1.48500 * 110.00215 * 299.99791 * 20 18 17 46 46 H 1.48495 * 110.00172 * 61.31943 * 20 18 17 47 47 H 1.08001 * 119.95454 * 179.97438 * 21 17 16 48 48 H 1.09005 * 110.56835 * 91.42465 * 24 23 22 49 49 H 1.08995 * 110.56947 * 214.14798 * 24 23 22 50 50 H 1.08005 * 120.00399 * 359.68246 * 27 26 25 51 51 H 1.09004 * 113.61454 * 89.11381 * 28 12 11 52 52 H 1.08992 * 113.61644 * 220.01610 * 28 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7212 -1.2492 5 8 2.0140 -0.6844 1.1856 6 6 1.6523 -1.9722 1.3384 7 8 0.9509 -2.5094 0.5040 8 7 2.0671 -2.6653 2.4172 9 6 1.6740 -4.0668 2.5832 10 1 0.7607 -4.3179 2.0439 11 6 2.8228 -5.0612 2.3458 12 6 3.1493 -4.9200 3.8420 13 1 3.8451 -4.1110 4.0640 14 6 3.5390 -6.2396 4.5114 15 8 4.9447 -6.4507 4.3653 16 6 5.4581 -7.5866 4.9087 17 6 6.8144 -7.8537 4.8029 18 6 7.7185 -6.8851 4.0849 19 8 7.9430 -5.7410 4.9112 20 14 9.3460 -7.7126 3.7145 21 6 7.3387 -9.0078 5.3551 22 6 6.5106 -9.8999 6.0158 23 8 6.7731 -11.0877 6.6371 24 6 5.4975 -11.7425 6.7688 25 8 4.5567 -10.6533 6.8120 26 6 5.1476 -9.6334 6.1236 27 6 4.6255 -8.4745 5.5737 28 6 1.6740 -4.5373 4.0473 29 1 -0.3633 0.5138 0.8899 30 1 -0.3633 0.5138 -0.8901 31 1 -0.3633 -1.0276 -0.0005 32 1 3.1300 1.4426 0.0005 33 1 1.6767 1.9563 -0.8900 34 1 1.6766 1.9564 0.8899 35 1 1.6768 -1.7489 -1.2491 36 1 1.6768 -0.2074 -2.1392 37 1 3.1301 -0.7216 -1.2489 38 1 2.6267 -2.2364 3.0834 39 1 3.6043 -4.6769 1.6903 40 1 2.4855 -6.0589 2.0647 41 1 2.9974 -7.0598 4.0401 42 1 3.2858 -6.1982 5.5707 43 1 7.2489 -6.5731 3.1521 44 1 8.5181 -5.0741 4.5118 45 1 9.9964 -8.1428 4.9783 46 1 9.1297 -8.8855 2.8298 47 1 8.3955 -9.2140 5.2711 48 1 5.3043 -12.3816 5.9072 49 1 5.4581 -12.3224 7.6909 50 1 3.5690 -8.2660 5.6561 51 1 1.0228 -5.3918 4.2313 52 1 1.5281 -3.7304 4.7653 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_1880786_15734082.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 15:16:44 Heat of formation + Delta-G solvation = -145.842780 kcal Electronic energy + Delta-G solvation = -35356.271323 eV Core-core repulsion = 30483.724528 eV Total energy + Delta-G solvation = -4872.546795 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.181 amu Computer time = 1.50 seconds Orbital eigenvalues (eV) -43.24730 -41.89173 -41.15446 -40.24984 -38.33467 -37.69590 -37.29523 -36.98216 -35.25389 -34.06912 -32.43517 -30.94222 -29.30645 -28.31794 -28.27857 -27.42776 -26.91355 -25.92649 -25.06864 -23.77177 -23.18171 -22.66540 -21.09295 -20.46679 -19.75907 -19.25182 -18.76729 -18.63584 -18.37516 -17.89328 -17.54482 -17.18240 -17.01856 -16.62079 -16.54736 -16.28317 -16.12559 -15.59809 -15.40534 -15.35794 -15.31485 -15.04720 -14.79008 -14.50789 -14.34693 -14.24370 -14.00397 -13.88793 -13.73469 -13.58914 -13.42118 -13.27125 -13.13421 -13.06892 -12.84691 -12.81689 -12.62899 -12.37850 -12.25216 -12.14455 -11.99916 -11.90007 -11.73718 -11.45679 -11.28732 -11.15915 -10.96401 -10.24077 -10.18661 -9.96748 -8.81387 -4.98312 -0.09536 0.10953 1.15976 1.28576 1.62392 1.64455 1.87087 1.96830 2.00692 2.32130 2.36612 3.09761 3.24293 3.30559 3.33629 3.45905 3.59006 3.63584 3.65266 3.78380 3.78657 3.84362 3.86827 3.96051 3.98132 4.01989 4.07969 4.15368 4.25732 4.28169 4.36871 4.46695 4.53522 4.55074 4.57729 4.60775 4.64043 4.75926 4.79144 4.84355 4.86670 4.88824 4.90249 4.91599 4.94141 5.00009 5.03639 5.10278 5.18790 5.34650 5.37505 5.49218 5.61568 5.90496 6.25085 6.40739 6.69989 7.42775 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.364 6.364 6 C 0.653 3.347 7 O -0.565 6.565 8 N -0.695 5.695 9 C 0.138 3.862 10 H 0.111 0.889 11 C -0.146 4.146 12 C -0.109 4.109 13 H 0.106 0.894 14 C 0.063 3.937 15 O -0.290 6.290 16 C 0.174 3.826 17 C -0.102 4.102 18 C -0.052 4.052 19 O -0.541 6.541 20 Si 0.679 3.321 21 C -0.064 4.064 22 C -0.002 4.002 23 O -0.306 6.306 24 C 0.213 3.787 25 O -0.305 6.305 26 C 0.084 3.916 27 C -0.193 4.193 28 C -0.136 4.136 29 H 0.060 0.940 30 H 0.072 0.928 31 H 0.087 0.913 32 H 0.067 0.933 33 H 0.082 0.918 34 H 0.067 0.933 35 H 0.087 0.913 36 H 0.072 0.928 37 H 0.060 0.940 38 H 0.407 0.593 39 H 0.078 0.922 40 H 0.096 0.904 41 H 0.068 0.932 42 H 0.068 0.932 43 H 0.078 0.922 44 H 0.381 0.619 45 H -0.249 1.249 46 H -0.253 1.253 47 H 0.140 0.860 48 H 0.087 0.913 49 H 0.136 0.864 50 H 0.146 0.854 51 H 0.103 0.897 52 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.504 2.083 -1.419 2.570 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.279 6.279 6 C 0.407 3.593 7 O -0.453 6.453 8 N -0.353 5.353 9 C 0.033 3.967 10 H 0.129 0.871 11 C -0.185 4.185 12 C -0.128 4.128 13 H 0.124 0.876 14 C -0.012 4.012 15 O -0.202 6.202 16 C 0.127 3.873 17 C -0.104 4.104 18 C -0.163 4.163 19 O -0.347 6.347 20 Si 0.580 3.420 21 C -0.082 4.082 22 C -0.046 4.046 23 O -0.222 6.222 24 C 0.101 3.899 25 O -0.220 6.220 26 C 0.039 3.961 27 C -0.212 4.212 28 C -0.174 4.174 29 H 0.079 0.921 30 H 0.091 0.909 31 H 0.106 0.894 32 H 0.086 0.914 33 H 0.101 0.899 34 H 0.086 0.914 35 H 0.106 0.894 36 H 0.091 0.909 37 H 0.079 0.921 38 H 0.242 0.758 39 H 0.097 0.903 40 H 0.114 0.886 41 H 0.086 0.914 42 H 0.086 0.914 43 H 0.096 0.904 44 H 0.228 0.772 45 H -0.174 1.174 46 H -0.178 1.178 47 H 0.157 0.843 48 H 0.105 0.895 49 H 0.153 0.847 50 H 0.164 0.836 51 H 0.121 0.879 52 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges 0.293 0.858 -1.351 1.627 hybrid contribution -0.574 -0.327 0.682 0.949 sum -0.281 0.531 -0.669 0.899 Atomic orbital electron populations 1.22525 0.93845 1.05048 1.02725 1.22124 0.94442 0.91561 0.81831 1.21880 1.02361 0.92331 1.03344 1.22522 1.01631 1.03446 0.96531 1.86307 1.71465 1.23369 1.46774 1.18058 0.78605 0.80578 0.82085 1.90921 1.40877 1.70523 1.42998 1.44350 1.55519 1.11632 1.23848 1.21740 0.99076 0.78625 0.97224 0.87098 1.23569 0.98806 1.00180 0.95918 1.22660 0.97007 0.96756 0.96333 0.87624 1.22982 0.79247 0.97948 1.01065 1.86199 1.24851 1.36621 1.72578 1.18123 0.91239 0.85599 0.92296 1.18253 0.91236 0.95900 1.04965 1.24360 1.06156 0.90666 0.95117 1.86513 1.72600 1.30883 1.44732 0.95334 0.80786 0.83680 0.82166 1.19643 0.99325 0.92660 0.96600 1.19423 0.92904 0.90685 1.01634 1.87412 1.30596 1.29246 1.74995 1.25709 0.71420 0.88053 1.04672 1.87387 1.42365 1.22397 1.69876 1.19435 0.90200 0.91868 0.94579 1.20038 1.01238 0.94522 1.05408 1.23375 0.95493 1.02246 0.96297 0.92112 0.90923 0.89431 0.91362 0.89919 0.91393 0.89427 0.90924 0.92088 0.75762 0.90326 0.88586 0.91390 0.91369 0.90415 0.77184 1.17395 1.17754 0.84268 0.89498 0.84659 0.83638 0.87884 0.89831 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.21 8.37 37.16 0.31 0.10 16 2 C 0.14 0.16 1.13 -90.62 -0.10 0.05 16 3 C -0.14 0.12 8.85 37.16 0.33 0.45 16 4 C -0.18 -0.21 8.37 37.16 0.31 0.10 16 5 O -0.36 -0.80 9.94 -40.32 -0.40 -1.20 16 6 C 0.65 1.63 8.06 54.05 0.44 2.06 16 7 O -0.56 -2.71 11.48 -19.28 -0.22 -2.94 16 8 N -0.69 0.31 5.27 -57.93 -0.31 0.01 16 9 C 0.14 -0.19 4.32 -67.12 -0.29 -0.48 16 10 H 0.11 -0.01 7.46 -51.93 -0.39 -0.40 16 11 C -0.15 0.26 7.43 -25.92 -0.19 0.07 16 12 C -0.11 0.27 3.89 -89.80 -0.35 -0.08 16 13 H 0.11 -0.23 8.14 -51.93 -0.42 -0.66 16 14 C 0.06 -0.09 4.58 37.16 0.17 0.08 16 15 O -0.29 -0.40 9.46 -19.67 -0.19 -0.59 16 16 C 0.17 0.45 6.66 -39.26 -0.26 0.19 16 17 C -0.10 -0.32 5.31 -104.46 -0.55 -0.87 16 18 C -0.05 -0.04 2.36 36.01 0.09 0.05 16 19 O -0.54 -0.44 12.86 -35.23 -0.45 -0.89 16 20 Si 0.68 -0.42 30.19 -169.99 -5.13 -5.55 16 21 C -0.06 -0.24 8.67 -39.48 -0.34 -0.58 16 22 C 0.00 -0.01 7.15 -39.09 -0.28 -0.29 16 23 O -0.31 -1.17 11.41 -46.02 -0.52 -1.69 16 24 C 0.21 0.10 8.89 101.05 0.90 1.00 16 25 O -0.30 -0.93 11.40 -45.69 -0.52 -1.45 16 26 C 0.08 0.31 7.15 -39.09 -0.28 0.03 16 27 C -0.19 -0.43 9.05 -39.32 -0.36 -0.78 16 28 C -0.14 0.46 7.39 -25.92 -0.19 0.27 16 29 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 30 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 31 H 0.09 0.28 5.88 -51.93 -0.31 -0.02 16 32 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 33 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 34 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 35 H 0.09 0.29 5.88 -51.93 -0.31 -0.02 16 36 H 0.07 -0.01 8.14 -51.92 -0.42 -0.44 16 37 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 38 H 0.41 -0.93 8.81 -40.82 -0.36 -1.29 16 39 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 40 H 0.10 -0.22 7.90 -51.93 -0.41 -0.63 16 41 H 0.07 -0.17 7.37 -51.93 -0.38 -0.55 16 42 H 0.07 -0.14 7.65 -51.93 -0.40 -0.53 16 43 H 0.08 -0.03 7.82 -51.93 -0.41 -0.44 16 44 H 0.38 -1.61 8.74 45.56 0.40 -1.22 16 45 H -0.25 -0.56 6.74 56.52 0.38 -0.18 16 46 H -0.25 -0.47 7.11 56.52 0.40 -0.06 16 47 H 0.14 0.44 4.89 -52.49 -0.26 0.18 16 48 H 0.09 -0.14 8.14 -51.93 -0.42 -0.57 16 49 H 0.14 -0.34 8.14 -51.93 -0.42 -0.76 16 50 H 0.15 -0.01 6.29 -52.48 -0.33 -0.34 16 51 H 0.10 -0.45 8.10 -51.93 -0.42 -0.87 16 52 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 LS Contribution 417.96 15.07 6.30 6.30 Total: 0.00 -9.40 417.96 -9.96 -19.36 By element: Atomic # 1 Polarization: -4.87 SS G_CDS: -7.85 Total: -12.73 kcal Atomic # 6 Polarization: 2.02 SS G_CDS: -0.66 Total: 1.36 kcal Atomic # 7 Polarization: 0.31 SS G_CDS: -0.31 Total: 0.01 kcal Atomic # 8 Polarization: -6.45 SS G_CDS: -2.31 Total: -8.75 kcal Atomic # 14 Polarization: -0.42 SS G_CDS: -5.13 Total: -5.55 kcal Total LS contribution 6.30 Total: 6.30 kcal Total: -9.40 -9.96 -19.36 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_1880786_15734082.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -126.481 kcal (2) G-P(sol) polarization free energy of solvation -9.404 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -135.885 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.958 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.362 kcal (6) G-S(sol) free energy of system = (1) + (5) -145.843 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.51 seconds