Wall clock time and date at job start Mon Mar 8 2021 14:30:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35904 * 116.99817 * 2 1 4 4 C 1.38746 * 120.02575 * 180.02562 * 3 2 1 5 5 C 1.50699 * 119.97779 * 359.97438 * 4 3 2 6 6 O 1.42905 * 109.47271 * 75.02026 * 5 4 3 7 7 Si 1.86294 * 109.47350 * 195.02269 * 5 4 3 8 8 C 1.38205 * 120.05454 * 180.02562 * 4 3 2 9 9 C 1.38155 * 120.10454 * 359.97438 * 8 4 3 10 10 C 1.38793 * 120.05991 * 0.02562 * 9 8 4 11 11 O 1.35891 * 120.02935 * 180.02562 * 10 9 8 12 12 C 1.42896 * 117.00195 * 359.97438 * 11 10 9 13 13 C 1.52997 * 109.47563 * 180.02562 * 12 11 10 14 14 H 1.09008 * 112.84798 * 45.32915 * 13 12 11 15 15 C 1.53775 * 113.61869 * 176.52505 * 13 12 11 16 16 C 1.53785 * 87.08133 * 139.98300 * 15 13 12 17 17 H 1.09004 * 113.61298 * 89.12102 * 16 15 13 18 18 O 1.42900 * 113.61699 * 219.93877 * 16 15 13 19 19 C 1.53782 * 113.61779 * 274.13869 * 13 12 11 20 20 C 1.38619 * 119.94068 * 359.97438 * 10 9 8 21 21 H 1.08993 * 109.47619 * 300.00146 * 1 2 3 22 22 H 1.09002 * 109.47029 * 60.00284 * 1 2 3 23 23 H 1.09004 * 109.46666 * 179.97438 * 1 2 3 24 24 H 1.09002 * 109.47226 * 315.02568 * 5 4 3 25 25 H 0.96699 * 113.99409 * 59.99891 * 6 5 4 26 26 H 1.48502 * 109.99967 * 58.68378 * 7 5 4 27 27 H 1.48508 * 110.00062 * 180.02562 * 7 5 4 28 28 H 1.07995 * 119.94706 * 179.72255 * 8 4 3 29 29 H 1.08005 * 119.97145 * 180.02562 * 9 8 4 30 30 H 1.09006 * 109.47119 * 300.00176 * 12 11 10 31 31 H 1.08998 * 109.47126 * 60.00316 * 12 11 10 32 32 H 1.09003 * 113.62011 * 254.52927 * 15 13 12 33 33 H 1.09006 * 113.61141 * 25.43727 * 15 13 12 34 34 H 0.96691 * 114.00384 * 180.02562 * 18 16 15 35 35 H 1.09003 * 113.60687 * 334.56702 * 19 13 12 36 36 H 1.09002 * 113.61355 * 105.46312 * 19 13 12 37 37 H 1.07999 * 120.05250 * 180.02562 * 20 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4315 1.2842 -0.0005 5 6 4.2524 0.0204 -0.0005 6 8 4.2193 -0.5691 -1.3019 7 14 6.0134 0.4237 0.4540 8 6 4.0595 2.5153 0.0000 9 6 3.3097 3.6757 0.0005 10 6 1.9234 3.6077 0.0011 11 8 1.1866 4.7495 0.0011 12 6 1.9045 5.9850 0.0011 13 6 0.9136 7.1507 0.0017 14 1 0.1017 7.0157 0.7164 15 6 1.5862 8.5310 0.0872 16 6 0.5408 9.0162 -0.9310 17 1 -0.3740 9.3917 -0.4723 18 8 1.0713 9.9033 -1.9177 19 6 0.4366 7.5546 -1.4033 20 6 1.2913 2.3741 0.0005 21 1 -0.3634 0.5138 0.8899 22 1 -0.3633 0.5138 -0.8900 23 1 -0.3633 -1.0277 -0.0005 24 1 3.8409 -0.6801 0.7261 25 1 4.5711 -0.0003 -2.0003 26 1 6.0582 1.0663 1.7920 27 1 6.8335 -0.8143 0.4569 28 1 5.1380 2.5704 0.0041 29 1 3.8027 4.6367 0.0005 30 1 2.5314 6.0410 0.8911 31 1 2.5312 6.0410 -0.8889 32 1 1.4939 9.0019 1.0658 33 1 2.6069 8.5437 -0.2953 34 1 0.4186 10.2122 -2.5607 35 1 1.1424 7.2998 -2.1940 36 1 -0.5825 7.2384 -1.6262 37 1 0.2127 2.3190 0.0005 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_197680_11354858.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 14:30:07 Heat of formation + Delta-G solvation = -99.973420 kcal Electronic energy + Delta-G solvation = -20256.763756 eV Core-core repulsion = 16967.599058 eV Total energy + Delta-G solvation = -3289.164698 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.124 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -41.68761 -40.69299 -39.63957 -38.25153 -36.91313 -36.03157 -32.22800 -31.22847 -29.39546 -28.34989 -26.86983 -26.12201 -24.22250 -22.95608 -22.21933 -20.73165 -19.75578 -18.71136 -18.16320 -17.54531 -17.23311 -17.12814 -16.77379 -16.41248 -16.30867 -15.97976 -15.55670 -15.16541 -14.95398 -14.59394 -14.26210 -14.03122 -13.68177 -13.56575 -13.42359 -12.86926 -12.79636 -12.60520 -12.51816 -12.12865 -12.05599 -11.91094 -11.73595 -11.61170 -11.31147 -10.84670 -10.26457 -9.62186 -9.02696 -4.98629 0.25807 0.38539 1.38494 1.70612 1.96473 2.05238 2.33329 2.63605 3.14189 3.34496 3.43624 3.63275 3.65469 3.72348 3.80513 3.87553 4.03361 4.07527 4.09103 4.13573 4.22943 4.23619 4.32727 4.42638 4.51000 4.57375 4.61008 4.65524 4.66411 4.71584 4.86241 5.00760 5.06389 5.24570 5.28472 5.30900 5.53420 6.24630 6.42613 6.61813 6.74459 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.301 6.301 3 C 0.192 3.808 4 C -0.193 4.193 5 C -0.050 4.050 6 O -0.537 6.537 7 Si 0.679 3.321 8 C -0.035 4.035 9 C -0.243 4.243 10 C 0.177 3.823 11 O -0.311 6.311 12 C 0.071 3.929 13 C -0.110 4.110 14 H 0.105 0.895 15 C -0.120 4.120 16 C 0.076 3.924 17 H 0.084 0.916 18 O -0.560 6.560 19 C -0.163 4.163 20 C -0.246 4.246 21 H 0.057 0.943 22 H 0.059 0.941 23 H 0.103 0.897 24 H 0.111 0.889 25 H 0.374 0.626 26 H -0.257 1.257 27 H -0.254 1.254 28 H 0.137 0.863 29 H 0.134 0.866 30 H 0.068 0.932 31 H 0.069 0.931 32 H 0.081 0.919 33 H 0.094 0.906 34 H 0.381 0.619 35 H 0.091 0.909 36 H 0.074 0.926 37 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.176 3.728 -1.051 4.048 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.072 4.072 2 O -0.213 6.213 3 C 0.145 3.855 4 C -0.194 4.194 5 C -0.161 4.161 6 O -0.342 6.342 7 Si 0.581 3.419 8 C -0.052 4.052 9 C -0.262 4.262 10 C 0.131 3.869 11 O -0.224 6.224 12 C -0.004 4.004 13 C -0.129 4.129 14 H 0.123 0.877 15 C -0.157 4.157 16 C 0.017 3.983 17 H 0.102 0.898 18 O -0.366 6.366 19 C -0.201 4.201 20 C -0.266 4.266 21 H 0.076 0.924 22 H 0.077 0.923 23 H 0.121 0.879 24 H 0.129 0.871 25 H 0.221 0.779 26 H -0.182 1.182 27 H -0.179 1.179 28 H 0.155 0.845 29 H 0.152 0.848 30 H 0.086 0.914 31 H 0.087 0.913 32 H 0.099 0.901 33 H 0.113 0.887 34 H 0.228 0.772 35 H 0.110 0.890 36 H 0.092 0.908 37 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -0.367 2.824 0.198 2.855 hybrid contribution -1.308 0.167 -0.044 1.319 sum -1.674 2.991 0.153 3.432 Atomic orbital electron populations 1.23153 0.78003 1.04384 1.01624 1.86192 1.21586 1.25946 1.87563 1.18439 0.91165 0.83792 0.92054 1.19584 0.91407 0.95989 1.12400 1.24815 1.08157 0.94067 0.89022 1.86542 1.86992 1.44461 1.16186 0.95182 0.77134 0.84102 0.85472 1.20571 0.99009 0.90642 0.95025 1.21109 0.92494 0.99705 1.12849 1.18646 0.89748 0.85902 0.92595 1.86062 1.35809 1.12607 1.87904 1.22868 0.94603 0.81001 1.01967 1.22333 0.99039 0.92321 0.99159 0.87685 1.23062 0.99813 0.93545 0.99288 1.23323 0.96818 0.88163 0.90021 0.89777 1.86519 1.40322 1.65973 1.43738 1.23802 1.02707 0.96760 0.96838 1.20429 1.00826 0.89620 1.15688 0.92428 0.92284 0.87874 0.87146 0.77891 1.18184 1.17911 0.84531 0.84829 0.91375 0.91306 0.90080 0.88720 0.77163 0.89015 0.90771 0.84395 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 2 O -0.30 -0.95 9.82 -19.44 -0.19 -1.14 16 3 C 0.19 0.56 6.66 -39.24 -0.26 0.30 16 4 C -0.19 -0.37 5.27 -104.45 -0.55 -0.92 16 5 C -0.05 -0.08 2.37 36.01 0.09 0.00 16 6 O -0.54 -1.15 12.88 -35.23 -0.45 -1.61 16 7 Si 0.68 -0.05 29.91 -169.99 -5.08 -5.14 16 8 C -0.03 -0.01 8.65 -39.62 -0.34 -0.35 16 9 C -0.24 -0.12 9.04 -39.41 -0.36 -0.48 16 10 C 0.18 0.34 6.68 -39.24 -0.26 0.08 16 11 O -0.31 -0.51 10.13 -19.40 -0.20 -0.70 16 12 C 0.07 -0.06 4.56 37.16 0.17 0.11 16 13 C -0.11 0.16 4.00 -89.81 -0.36 -0.20 16 14 H 0.10 -0.16 8.14 -51.92 -0.42 -0.58 16 15 C -0.12 0.18 7.48 -25.92 -0.19 -0.02 16 16 C 0.08 -0.09 5.21 -25.83 -0.13 -0.22 16 17 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 18 O -0.56 -0.07 13.68 -35.23 -0.48 -0.55 16 19 C -0.16 0.20 7.48 -25.83 -0.19 0.00 16 20 C -0.25 -0.56 8.97 -39.29 -0.35 -0.91 16 21 H 0.06 -0.07 7.66 -51.93 -0.40 -0.47 16 22 H 0.06 -0.06 7.66 -51.93 -0.40 -0.46 16 23 H 0.10 -0.18 8.14 -51.93 -0.42 -0.61 16 24 H 0.11 0.33 7.82 -51.93 -0.41 -0.08 16 25 H 0.37 -0.76 8.70 45.56 0.40 -0.36 16 26 H -0.26 -0.58 7.11 56.52 0.40 -0.18 16 27 H -0.25 -0.79 7.11 56.52 0.40 -0.39 16 28 H 0.14 -0.36 5.11 -52.49 -0.27 -0.62 16 29 H 0.13 -0.21 6.29 -52.48 -0.33 -0.54 16 30 H 0.07 -0.12 7.66 -51.93 -0.40 -0.52 16 31 H 0.07 -0.10 7.39 -51.93 -0.38 -0.49 16 32 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 33 H 0.09 -0.11 8.10 -51.93 -0.42 -0.53 16 34 H 0.38 -1.44 9.12 45.56 0.42 -1.03 16 35 H 0.09 -0.05 7.92 -51.93 -0.41 -0.47 16 36 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 37 H 0.14 0.15 6.30 -52.49 -0.33 -0.18 16 LS Contribution 307.28 15.07 4.63 4.63 Total: 0.00 -7.59 307.28 -7.78 -15.37 By element: Atomic # 1 Polarization: -4.99 SS G_CDS: -4.24 Total: -9.24 kcal Atomic # 6 Polarization: 0.14 SS G_CDS: -1.76 Total: -1.62 kcal Atomic # 8 Polarization: -2.68 SS G_CDS: -1.32 Total: -4.00 kcal Atomic # 14 Polarization: -0.05 SS G_CDS: -5.08 Total: -5.14 kcal Total LS contribution 4.63 Total: 4.63 kcal Total: -7.59 -7.78 -15.37 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_197680_11354858.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -84.600 kcal (2) G-P(sol) polarization free energy of solvation -7.593 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -92.192 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.781 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.374 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.973 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds