Wall clock time and date at job start Mon Mar 8 2021 14:04:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42890 * 1 3 3 C 1.35898 * 117.00071 * 2 1 4 4 C 1.38613 * 120.02513 * 0.23478 * 3 2 1 5 5 C 1.38658 * 119.88962 * 180.27737 * 4 3 2 6 6 O 1.35902 * 120.02365 * 179.76802 * 5 4 3 7 7 C 1.42906 * 116.99507 * 179.71806 * 6 5 4 8 8 O 1.42905 * 109.46854 * 75.00277 * 7 6 5 9 9 Si 1.63101 * 113.99905 * 179.97438 * 8 7 6 10 10 C 1.86306 * 109.46968 * 299.99867 * 9 8 7 11 11 C 1.86297 * 109.47197 * 59.99753 * 9 8 7 12 12 C 1.86302 * 109.47016 * 179.97438 * 9 8 7 13 13 C 1.53000 * 109.46869 * 60.00213 * 12 9 8 14 14 C 1.52998 * 109.46788 * 179.97438 * 12 9 8 15 15 C 1.52998 * 109.46886 * 299.99828 * 12 9 8 16 16 C 1.38748 * 119.94766 * 359.48508 * 5 4 3 17 17 C 1.38197 * 120.05143 * 0.26164 * 16 5 4 18 18 C 1.38158 * 120.11025 * 359.97438 * 17 16 5 19 19 C 1.50702 * 119.97006 * 180.02562 * 18 17 16 20 20 O 1.42900 * 109.47142 * 105.00149 * 19 18 17 21 21 Si 1.86293 * 109.47479 * 344.99906 * 19 18 17 22 22 H 1.48500 * 109.46837 * 60.00128 * 21 19 18 23 23 H 1.48501 * 109.47323 * 180.02562 * 21 19 18 24 24 H 1.48500 * 109.47394 * 300.00395 * 21 19 18 25 25 H 1.09008 * 109.47005 * 179.97438 * 1 2 3 26 26 H 1.09003 * 109.47456 * 299.99479 * 1 2 3 27 27 H 1.09000 * 109.47333 * 60.00165 * 1 2 3 28 28 H 1.08000 * 120.05922 * 0.02562 * 4 3 2 29 29 H 1.09000 * 109.47490 * 315.00136 * 7 6 5 30 30 H 1.09001 * 109.47232 * 194.99490 * 7 6 5 31 31 H 1.08998 * 109.46973 * 59.99630 * 10 9 8 32 32 H 1.09001 * 109.46903 * 180.02562 * 10 9 8 33 33 H 1.08999 * 109.46903 * 299.99734 * 10 9 8 34 34 H 1.09005 * 109.47355 * 60.00017 * 11 9 8 35 35 H 1.08997 * 109.47216 * 180.02562 * 11 9 8 36 36 H 1.08999 * 109.47207 * 300.00013 * 11 9 8 37 37 H 1.08997 * 109.47412 * 59.99882 * 13 12 9 38 38 H 1.08999 * 109.46454 * 180.02562 * 13 12 9 39 39 H 1.09006 * 109.47253 * 299.99285 * 13 12 9 40 40 H 1.08997 * 109.47329 * 60.00309 * 14 12 9 41 41 H 1.08999 * 109.46825 * 180.02562 * 14 12 9 42 42 H 1.08997 * 109.47384 * 300.00052 * 14 12 9 43 43 H 1.08997 * 109.47329 * 60.00388 * 15 12 9 44 44 H 1.09009 * 109.46785 * 180.02562 * 15 12 9 45 45 H 1.08997 * 109.47366 * 299.99774 * 15 12 9 46 46 H 1.08000 * 119.97610 * 180.27870 * 16 5 4 47 47 H 1.08001 * 119.94682 * 179.97438 * 17 16 5 48 48 H 1.08999 * 109.46898 * 224.99832 * 19 18 17 49 49 H 0.96698 * 113.99963 * 300.00149 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 1.2915 2.3737 0.0049 5 6 1.9239 3.6076 -0.0009 6 8 1.1869 4.7495 -0.0009 7 6 1.9049 5.9850 -0.0008 8 8 2.4457 6.2217 -1.3022 9 14 3.2910 7.6110 -1.4268 10 6 2.1809 9.0516 -1.0224 11 6 4.7222 7.5762 -0.2347 12 6 3.9358 7.7919 -3.1653 13 6 2.7607 7.8203 -4.1446 14 6 4.7281 9.0955 -3.2822 15 6 4.8475 6.6088 -3.4966 16 6 3.3097 3.6757 -0.0009 17 6 4.0596 2.5149 -0.0004 18 6 3.4318 1.2842 0.0004 19 6 4.2527 0.0204 0.0015 20 8 4.2196 -0.5680 1.3033 21 14 6.0138 0.4233 -0.4533 22 1 6.5743 1.3784 0.5361 23 1 6.8225 -0.8222 -0.4529 24 1 6.0483 1.0348 -1.8061 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3634 0.5138 0.8900 27 1 -0.3634 0.5138 -0.8900 28 1 0.2129 2.3188 0.0092 29 1 2.7158 5.9340 0.7259 30 1 1.2292 6.7980 0.2651 31 1 1.8040 8.9455 -0.0052 32 1 2.7457 9.9801 -1.1061 33 1 1.3436 9.0720 -1.7199 34 1 5.3717 6.7333 -0.4712 35 1 5.2868 8.5048 -0.3176 36 1 4.3453 7.4701 0.7826 37 1 2.1111 8.6632 -3.9085 38 1 3.1380 7.9257 -5.1618 39 1 2.1958 6.8918 -4.0615 40 1 5.5653 9.0757 -2.5844 41 1 5.1050 9.2015 -4.2994 42 1 4.0783 9.9381 -3.0462 43 1 4.2827 5.6803 -3.4134 44 1 5.2252 6.7149 -4.5137 45 1 5.6847 6.5886 -2.7989 46 1 3.8027 4.6366 -0.0008 47 1 5.1382 2.5699 -0.0008 48 1 3.8413 -0.6806 -0.7247 49 1 4.5714 0.0013 2.0013 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_197680_14468166.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 14:04:27 Heat of formation + Delta-G solvation = -180.515454 kcal Electronic energy + Delta-G solvation = -27381.925811 eV Core-core repulsion = 23626.212729 eV Total energy + Delta-G solvation = -3755.713082 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 328.171 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -41.65216 -40.24114 -38.33737 -37.44359 -36.93335 -36.52245 -32.06543 -31.17659 -29.64527 -29.23788 -28.32569 -27.96020 -27.49588 -27.33956 -25.86405 -23.30149 -22.35557 -20.56779 -19.91806 -18.54501 -18.41283 -17.81423 -17.28469 -16.93779 -16.71242 -16.34259 -16.03044 -15.71598 -15.38247 -15.21662 -14.99806 -14.91599 -14.83926 -14.68947 -14.39417 -14.17959 -13.93257 -13.68547 -13.60241 -13.49004 -13.40647 -13.03030 -13.02233 -12.92161 -12.73034 -12.51508 -12.46316 -12.11885 -12.09924 -11.98134 -11.84635 -11.69438 -11.68283 -11.63070 -11.46731 -10.59137 -10.23654 -10.20381 -9.61681 -8.98956 0.28849 0.42792 1.14422 1.24410 1.45853 1.52939 1.58909 1.85097 1.98001 2.00886 2.29298 2.45618 2.69371 3.59652 3.65699 3.72170 3.89332 3.93024 4.02716 4.03195 4.12020 4.14415 4.28711 4.32122 4.37068 4.46170 4.49539 4.52366 4.55757 4.55903 4.57880 4.64801 4.72448 4.77711 4.77952 4.91965 4.93843 5.02518 5.02824 5.10752 5.14226 5.24932 5.31076 5.33843 5.35532 5.39614 5.41402 5.47167 5.55928 6.20652 6.45171 6.72880 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.299 6.299 3 C 0.193 3.807 4 C -0.242 4.242 5 C 0.177 3.823 6 O -0.297 6.297 7 C 0.248 3.752 8 O -0.644 6.644 9 Si 1.291 2.709 10 C -0.513 4.513 11 C -0.515 4.515 12 C -0.372 4.372 13 C -0.135 4.135 14 C -0.137 4.137 15 C -0.135 4.135 16 C -0.228 4.228 17 C -0.053 4.053 18 C -0.189 4.189 19 C -0.063 4.063 20 O -0.535 6.535 21 Si 0.945 3.055 22 H -0.253 1.253 23 H -0.253 1.253 24 H -0.249 1.249 25 H 0.103 0.897 26 H 0.058 0.942 27 H 0.058 0.942 28 H 0.140 0.860 29 H 0.065 0.935 30 H 0.110 0.890 31 H 0.067 0.933 32 H 0.078 0.922 33 H 0.076 0.924 34 H 0.075 0.925 35 H 0.079 0.921 36 H 0.067 0.933 37 H 0.055 0.945 38 H 0.054 0.946 39 H 0.060 0.940 40 H 0.056 0.944 41 H 0.057 0.943 42 H 0.056 0.944 43 H 0.060 0.940 44 H 0.055 0.945 45 H 0.054 0.946 46 H 0.133 0.867 47 H 0.132 0.868 48 H 0.116 0.884 49 H 0.371 0.629 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.073 3.139 1.022 3.302 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.072 4.072 2 O -0.211 6.211 3 C 0.146 3.854 4 C -0.261 4.261 5 C 0.132 3.868 6 O -0.211 6.211 7 C 0.136 3.864 8 O -0.604 6.604 9 Si 1.423 2.577 10 C -0.615 4.615 11 C -0.617 4.617 12 C -0.416 4.416 13 C -0.192 4.192 14 C -0.194 4.194 15 C -0.193 4.193 16 C -0.247 4.247 17 C -0.071 4.071 18 C -0.190 4.190 19 C -0.174 4.174 20 O -0.340 6.340 21 Si 0.768 3.232 22 H -0.177 1.177 23 H -0.177 1.177 24 H -0.172 1.172 25 H 0.121 0.879 26 H 0.076 0.924 27 H 0.076 0.924 28 H 0.157 0.843 29 H 0.083 0.917 30 H 0.128 0.872 31 H 0.086 0.914 32 H 0.097 0.903 33 H 0.095 0.905 34 H 0.094 0.906 35 H 0.098 0.902 36 H 0.086 0.914 37 H 0.074 0.926 38 H 0.073 0.927 39 H 0.079 0.921 40 H 0.075 0.925 41 H 0.077 0.923 42 H 0.075 0.925 43 H 0.079 0.921 44 H 0.074 0.926 45 H 0.073 0.927 46 H 0.151 0.849 47 H 0.149 0.851 48 H 0.133 0.867 49 H 0.218 0.782 Dipole moment (debyes) X Y Z Total from point charges 0.291 2.420 0.317 2.458 hybrid contribution -0.150 1.231 0.393 1.301 sum 0.141 3.651 0.710 3.722 Atomic orbital electron populations 1.23155 0.78047 1.04378 1.01624 1.86189 1.21518 1.25820 1.87572 1.18383 0.91047 0.83793 0.92156 1.20446 1.00877 0.89551 1.15270 1.18616 0.89802 0.85762 0.92648 1.86251 1.35285 1.12635 1.86884 1.23437 0.94785 0.84981 0.83208 1.85329 1.74720 1.64707 1.35685 0.76590 0.61464 0.53754 0.65859 1.27035 1.11890 1.17241 1.05339 1.27067 1.17015 1.05381 1.12243 1.25745 1.00839 0.98312 1.16689 1.21521 0.96869 1.01875 0.98948 1.21561 0.99599 0.95817 1.02461 1.21526 0.98812 0.97144 1.01772 1.21066 0.92501 0.99505 1.11595 1.20721 0.99665 0.90968 0.95710 1.19517 0.91503 0.95799 1.12206 1.24727 1.08477 0.94910 0.89239 1.86556 1.86899 1.44373 1.16128 0.85821 0.75698 0.80496 0.81220 1.17691 1.17679 1.17198 0.87870 0.92352 0.92377 0.84250 0.91742 0.87249 0.91389 0.90320 0.90538 0.90621 0.90166 0.91366 0.92640 0.92654 0.92117 0.92469 0.92348 0.92458 0.92096 0.92631 0.92673 0.84921 0.85086 0.86662 0.78216 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 2 O -0.30 -0.83 9.82 -19.42 -0.19 -1.02 16 3 C 0.19 0.55 6.66 -39.24 -0.26 0.29 16 4 C -0.24 -0.58 8.97 -39.29 -0.35 -0.93 16 5 C 0.18 0.44 6.62 -39.24 -0.26 0.18 16 6 O -0.30 -0.60 10.40 -43.24 -0.45 -1.05 16 7 C 0.25 -0.20 5.42 101.05 0.55 0.35 16 8 O -0.64 0.03 8.03 -59.04 -0.47 -0.45 16 9 Si 1.29 -2.61 8.45 -169.99 -1.44 -4.05 16 10 C -0.51 0.99 8.50 101.05 0.86 1.85 16 11 C -0.52 1.12 8.50 101.05 0.86 1.98 16 12 C -0.37 0.33 0.53 -90.62 -0.05 0.28 16 13 C -0.13 0.03 7.85 37.16 0.29 0.32 16 14 C -0.14 0.18 7.85 37.16 0.29 0.47 16 15 C -0.14 0.04 7.85 37.16 0.29 0.34 16 16 C -0.23 -0.34 8.78 -39.41 -0.35 -0.68 16 17 C -0.05 -0.07 8.65 -39.63 -0.34 -0.41 16 18 C -0.19 -0.41 5.27 -104.45 -0.55 -0.96 16 19 C -0.06 -0.09 2.38 36.01 0.09 0.00 16 20 O -0.54 -1.07 12.88 -35.23 -0.45 -1.53 16 21 Si 0.94 0.31 25.49 -169.99 -4.33 -4.02 16 22 H -0.25 0.07 6.73 56.52 0.38 0.45 16 23 H -0.25 -0.42 7.11 56.52 0.40 -0.02 16 24 H -0.25 -0.23 7.11 56.52 0.40 0.17 16 25 H 0.10 -0.21 8.14 -51.92 -0.42 -0.64 16 26 H 0.06 -0.08 7.65 -51.93 -0.40 -0.47 16 27 H 0.06 -0.08 7.67 -51.93 -0.40 -0.48 16 28 H 0.14 0.14 6.30 -52.49 -0.33 -0.19 16 29 H 0.07 -0.18 5.77 -51.93 -0.30 -0.48 16 30 H 0.11 -0.36 7.21 -51.93 -0.37 -0.74 16 31 H 0.07 -0.18 7.48 -51.93 -0.39 -0.57 16 32 H 0.08 -0.17 7.79 -51.93 -0.40 -0.57 16 33 H 0.08 -0.11 7.79 -51.93 -0.40 -0.52 16 34 H 0.07 -0.15 7.79 -51.93 -0.40 -0.55 16 35 H 0.08 -0.19 7.79 -51.93 -0.40 -0.60 16 36 H 0.07 -0.19 7.48 -51.93 -0.39 -0.58 16 37 H 0.05 -0.05 7.80 -51.93 -0.40 -0.46 16 38 H 0.05 0.00 8.14 -51.93 -0.42 -0.42 16 39 H 0.06 0.02 7.97 -51.93 -0.41 -0.39 16 40 H 0.06 -0.12 7.79 -51.93 -0.40 -0.52 16 41 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 42 H 0.06 -0.11 7.79 -51.93 -0.40 -0.52 16 43 H 0.06 0.02 7.96 -51.93 -0.41 -0.40 16 44 H 0.05 0.00 8.14 -51.92 -0.42 -0.42 16 45 H 0.05 -0.06 7.79 -51.93 -0.40 -0.47 16 46 H 0.13 -0.04 5.85 -52.49 -0.31 -0.35 16 47 H 0.13 -0.07 4.88 -52.49 -0.26 -0.32 16 48 H 0.12 0.17 7.82 -51.93 -0.41 -0.23 16 49 H 0.37 -0.56 8.70 45.56 0.40 -0.17 16 LS Contribution 387.29 15.07 5.84 5.84 Total: 0.00 -5.98 387.29 -7.17 -13.14 By element: Atomic # 1 Polarization: -3.20 SS G_CDS: -7.72 Total: -10.92 kcal Atomic # 6 Polarization: 2.00 SS G_CDS: 2.06 Total: 4.05 kcal Atomic # 8 Polarization: -2.48 SS G_CDS: -1.57 Total: -4.05 kcal Atomic # 14 Polarization: -2.30 SS G_CDS: -5.77 Total: -8.07 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -5.98 -7.17 -13.14 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_197680_14468166.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -167.372 kcal (2) G-P(sol) polarization free energy of solvation -5.975 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -173.348 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.168 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.143 kcal (6) G-S(sol) free energy of system = (1) + (5) -180.515 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds