Wall clock time and date at job start Mon Mar 8 2021 15:25:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86302 * 109.46931 * 2 1 4 4 C 1.50696 * 109.47435 * 120.00021 * 2 1 3 5 5 C 1.38250 * 119.93888 * 244.97823 * 4 2 1 6 6 C 1.38261 * 120.03804 * 180.02562 * 5 4 2 7 7 Cl 1.73602 * 120.03339 * 180.02562 * 6 5 4 8 8 C 1.38805 * 119.92727 * 0.02562 * 6 5 4 9 9 O 1.35925 * 120.06493 * 180.27008 * 8 6 5 10 10 C 1.42896 * 117.00602 * 179.72314 * 9 8 6 11 11 C 1.52998 * 109.47240 * 180.02562 * 10 9 8 12 12 H 1.09007 * 109.47139 * 180.02562 * 11 10 9 13 13 O 1.42972 * 109.46939 * 299.99916 * 11 10 9 14 14 C 1.43090 * 113.77203 * 178.79700 * 13 11 10 15 15 C 1.53263 * 108.94109 * 302.03117 * 14 13 11 16 16 H 1.08998 * 109.57665 * 294.71348 * 15 14 13 17 17 N 1.46503 * 109.67942 * 174.39160 * 15 14 13 18 18 C 1.34522 * 124.45956 * 300.27332 * 17 15 14 19 19 O 1.21443 * 125.71393 * 0.03694 * 18 17 15 20 20 C 1.47821 * 108.57815 * 179.90551 * 18 17 15 21 21 C 1.40953 * 105.87750 * 0.34921 * 20 18 17 22 22 C 1.38569 * 119.81797 * 179.79870 * 21 20 18 23 23 C 1.38615 * 119.71975 * 359.97438 * 22 21 20 24 24 C 1.38225 * 120.45761 * 359.97438 * 23 22 21 25 25 C 1.38564 * 134.30149 * 180.10459 * 20 18 17 26 26 C 1.34520 * 124.45667 * 120.57499 * 17 15 14 27 27 O 1.21443 * 125.71176 * 359.96097 * 26 17 15 28 28 C 1.53263 * 108.84525 * 54.52189 * 15 14 13 29 29 O 1.42963 * 109.47524 * 60.00174 * 11 10 9 30 30 C 1.38715 * 119.87981 * 359.97438 * 8 6 5 31 31 C 1.38149 * 119.95755 * 0.02562 * 30 8 6 32 32 H 0.96706 * 113.99922 * 299.99122 * 1 2 3 33 33 H 1.08994 * 109.47378 * 240.00524 * 2 1 3 34 34 H 1.48495 * 110.00288 * 178.68241 * 3 2 1 35 35 H 1.48500 * 110.00024 * 300.00353 * 3 2 1 36 36 H 1.07995 * 119.97969 * 0.02562 * 5 4 2 37 37 H 1.09004 * 109.47212 * 300.00697 * 10 9 8 38 38 H 1.08998 * 109.47107 * 60.00399 * 10 9 8 39 39 H 1.08995 * 109.56375 * 182.18708 * 14 13 11 40 40 H 1.09007 * 109.55722 * 61.86496 * 14 13 11 41 41 H 1.07999 * 120.13983 * 180.02562 * 22 21 20 42 42 H 1.08002 * 119.76765 * 179.97438 * 23 22 21 43 43 H 1.08004 * 119.76573 * 179.97438 * 24 23 22 44 44 H 1.08001 * 120.13747 * 0.24682 * 25 20 18 45 45 H 1.08998 * 109.56020 * 185.63498 * 28 15 14 46 46 H 1.08998 * 109.55853 * 65.31658 * 28 15 14 47 47 H 1.08004 * 120.01934 * 179.97438 * 30 8 6 48 48 H 1.07992 * 119.96113 * 180.02562 * 31 30 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6391 -0.0110 2.1902 6 6 3.1015 -0.6609 3.3197 7 17 3.9896 0.2176 4.5252 8 6 2.8547 -2.0163 3.4885 9 8 3.3032 -2.6568 4.6004 10 6 3.0074 -4.0505 4.7102 11 6 3.5877 -4.5936 6.0175 12 1 3.3624 -5.6568 6.1010 13 8 5.0049 -4.4052 6.0244 14 6 5.6412 -4.8585 7.2232 15 6 5.0299 -4.1217 8.4200 16 1 5.2649 -3.0594 8.3537 17 7 5.5738 -4.6679 9.6659 18 6 5.4554 -5.9517 10.0498 19 8 4.8899 -6.8283 9.4279 20 6 6.1314 -6.1176 11.3538 21 6 6.6351 -4.8452 11.6917 22 6 7.3272 -4.6713 12.8795 23 6 7.5187 -5.7508 13.7277 24 6 7.0238 -6.9983 13.3967 25 6 6.3310 -7.1877 12.2112 26 6 6.2524 -3.9504 10.5792 27 8 6.5080 -2.7656 10.5026 28 6 3.5096 -4.3137 8.3957 29 8 3.0087 -3.8951 7.1224 30 6 2.1443 -2.7149 2.5234 31 6 1.6845 -2.0607 1.3968 32 1 -0.3933 0.4416 0.7652 33 1 1.7923 -0.5137 -0.8900 34 1 3.5345 1.7704 0.0321 35 1 1.5613 2.4679 -1.2084 36 1 2.8309 1.0435 2.0578 37 1 1.9269 -4.1940 4.7052 38 1 3.4485 -4.5830 3.8676 39 1 6.7093 -4.6477 7.1716 40 1 5.4844 -5.9313 7.3363 41 1 7.7150 -3.6986 13.1438 42 1 8.0583 -5.6162 14.6535 43 1 7.1799 -7.8318 14.0657 44 1 5.9470 -8.1647 11.9576 45 1 3.0533 -3.7133 9.1827 46 1 3.2721 -5.3658 8.5533 47 1 1.9513 -3.7697 2.6523 48 1 1.1311 -2.6044 0.6456 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_2162996_13594088.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 15:25:27 Heat of formation + Delta-G solvation = -122.030901 kcal Electronic energy + Delta-G solvation = -39039.941693 eV Core-core repulsion = 33634.109821 eV Total energy + Delta-G solvation = -5405.831872 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 432.095 amu Computer time = 1.71 seconds Orbital eigenvalues (eV) -43.72955 -41.64105 -41.05532 -39.97846 -39.54824 -39.16652 -37.69384 -37.24607 -37.09475 -36.98008 -34.58146 -32.30681 -32.17943 -32.10936 -31.26206 -29.75088 -27.51558 -26.50035 -26.37223 -25.53282 -24.67618 -23.50621 -23.41012 -22.60274 -22.15647 -21.03119 -19.65581 -19.15148 -18.99496 -18.76311 -18.33699 -18.01848 -17.67922 -17.54067 -17.04757 -16.76117 -16.69754 -16.58168 -16.43974 -16.17282 -15.95492 -15.92673 -15.66132 -15.50591 -15.35281 -15.34912 -15.08459 -14.85634 -14.79356 -14.62625 -14.32335 -14.19567 -13.82073 -13.80099 -13.39141 -13.29611 -12.78167 -12.70157 -12.67354 -12.51003 -12.42164 -12.27565 -12.24900 -12.03380 -11.96346 -11.80092 -11.72169 -11.65042 -10.97578 -10.87810 -10.45939 -10.27543 -10.26218 -10.02818 -9.26633 -5.03187 -1.13399 -0.07709 0.02082 0.09256 0.85317 0.86738 1.12050 1.28599 1.59486 1.59893 1.91447 1.92803 2.18590 2.28155 2.42329 2.42665 2.55603 3.04937 3.13390 3.20511 3.43922 3.50108 3.51934 3.55912 3.65302 3.68531 3.82667 3.89081 3.90874 4.02361 4.02657 4.08346 4.12859 4.13257 4.14741 4.19678 4.25744 4.33811 4.40101 4.43497 4.45264 4.52450 4.64452 4.78930 4.81497 4.86175 5.05181 5.16813 5.23612 5.30622 5.32210 5.39095 5.50827 5.63910 5.72622 5.89894 6.15703 6.32182 6.76377 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.056 4.056 3 Si 0.749 3.251 4 C -0.148 4.148 5 C -0.072 4.072 6 C -0.085 4.085 7 Cl -0.067 7.067 8 C 0.134 3.866 9 O -0.305 6.305 10 C 0.068 3.932 11 C 0.237 3.763 12 H 0.109 0.891 13 O -0.385 6.385 14 C 0.053 3.947 15 C 0.076 3.924 16 H 0.112 0.888 17 N -0.569 5.569 18 C 0.577 3.423 19 O -0.479 6.479 20 C -0.159 4.159 21 C -0.160 4.160 22 C -0.045 4.045 23 C -0.084 4.084 24 C -0.083 4.083 25 C -0.042 4.042 26 C 0.574 3.426 27 O -0.490 6.490 28 C 0.053 3.947 29 O -0.384 6.384 30 C -0.195 4.195 31 C -0.045 4.045 32 H 0.396 0.604 33 H 0.117 0.883 34 H -0.289 1.289 35 H -0.292 1.292 36 H 0.151 0.849 37 H 0.113 0.887 38 H 0.111 0.889 39 H 0.110 0.890 40 H 0.078 0.922 41 H 0.152 0.848 42 H 0.176 0.824 43 H 0.177 0.823 44 H 0.157 0.843 45 H 0.111 0.889 46 H 0.078 0.922 47 H 0.164 0.836 48 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.144 -6.629 6.571 9.335 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.167 4.167 3 Si 0.656 3.344 4 C -0.149 4.149 5 C -0.090 4.090 6 C -0.112 4.112 7 Cl -0.038 7.038 8 C 0.087 3.913 9 O -0.218 6.218 10 C -0.007 4.007 11 C 0.142 3.858 12 H 0.126 0.874 13 O -0.305 6.305 14 C -0.024 4.024 15 C -0.026 4.026 16 H 0.130 0.870 17 N -0.314 5.314 18 C 0.368 3.632 19 O -0.352 6.352 20 C -0.162 4.162 21 C -0.163 4.163 22 C -0.064 4.064 23 C -0.101 4.101 24 C -0.101 4.101 25 C -0.060 4.060 26 C 0.366 3.634 27 O -0.363 6.363 28 C -0.024 4.024 29 O -0.303 6.303 30 C -0.214 4.214 31 C -0.063 4.063 32 H 0.246 0.754 33 H 0.134 0.866 34 H -0.216 1.216 35 H -0.219 1.219 36 H 0.168 0.832 37 H 0.131 0.869 38 H 0.129 0.871 39 H 0.128 0.872 40 H 0.096 0.904 41 H 0.170 0.830 42 H 0.193 0.807 43 H 0.195 0.805 44 H 0.175 0.825 45 H 0.129 0.871 46 H 0.096 0.904 47 H 0.182 0.818 48 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 0.346 -5.759 5.212 7.775 hybrid contribution 0.329 -0.425 -0.126 0.552 sum 0.675 -6.183 5.086 8.034 Atomic orbital electron populations 1.86474 1.16859 1.82051 1.50538 1.24890 0.85384 1.09621 0.96774 0.93938 0.78323 0.76729 0.85386 1.20239 1.01911 0.95360 0.97419 1.20865 0.96668 1.00186 0.91248 1.20292 1.05509 0.90634 0.94764 1.98385 1.74260 1.75379 1.55762 1.18926 0.94299 0.90588 0.87443 1.86281 1.73394 1.24066 1.38010 1.23228 1.02324 0.79631 0.95489 1.23976 0.78703 0.96294 0.86798 0.87401 1.88241 1.20982 1.84295 1.36969 1.22981 0.98573 0.98453 0.82410 1.22562 0.96294 1.01163 0.82625 0.87009 1.46469 1.52268 1.11673 1.20959 1.18717 0.77906 0.80788 0.85758 1.90785 1.40531 1.44211 1.59678 1.20454 1.03671 0.96308 0.95800 1.20428 1.04982 0.93614 0.97310 1.21162 0.93538 1.01600 0.90080 1.21958 0.96886 0.91329 0.99956 1.21975 0.93749 0.99071 0.95313 1.21171 0.94792 0.97994 0.92049 1.18827 0.75677 0.86246 0.82677 1.90828 1.52550 1.15130 1.77816 1.22990 0.90661 1.02199 0.86576 1.88238 1.63324 1.64583 1.14197 1.21537 1.02777 1.02049 0.95036 1.21141 0.95359 0.93349 0.96483 0.75418 0.86595 1.21629 1.21912 0.83182 0.86927 0.87141 0.87206 0.90416 0.83017 0.80654 0.80520 0.82500 0.87109 0.90415 0.81832 0.83093 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.46 12.83 -148.98 -1.91 -1.45 16 2 C -0.06 0.05 2.80 71.23 0.20 0.25 16 3 Si 0.75 -0.44 29.80 68.60 2.04 1.60 16 4 C -0.15 -0.04 5.35 -19.85 -0.11 -0.14 16 5 C -0.07 -0.17 8.45 22.28 0.19 0.02 16 6 C -0.08 -0.54 6.33 22.41 0.14 -0.39 16 7 Cl -0.07 -0.61 28.50 -2.72 -0.08 -0.68 16 8 C 0.13 0.67 6.68 22.52 0.15 0.82 16 9 O -0.30 -2.06 9.38 -73.13 -0.69 -2.75 16 10 C 0.07 -0.04 4.83 71.98 0.35 0.31 16 11 C 0.24 0.54 3.59 71.98 0.26 0.80 16 12 H 0.11 -0.30 8.14 -2.38 -0.02 -0.32 16 13 O -0.39 -2.40 10.43 -121.89 -1.27 -3.67 16 14 C 0.05 0.21 6.33 72.07 0.46 0.67 16 15 C 0.08 0.38 3.07 45.17 0.14 0.52 16 16 H 0.11 0.95 7.59 -2.39 -0.02 0.93 16 17 N -0.57 -2.57 2.53 -739.56 -1.87 -4.45 16 18 C 0.58 2.10 7.35 86.82 0.64 2.74 16 19 O -0.48 -3.07 15.18 -3.54 -0.05 -3.12 16 20 C -0.16 0.02 6.41 -20.00 -0.13 -0.11 16 21 C -0.16 -0.15 6.41 -20.00 -0.13 -0.28 16 22 C -0.05 0.20 10.09 22.44 0.23 0.43 16 23 C -0.08 0.83 10.04 22.36 0.22 1.05 16 24 C -0.08 0.87 10.03 22.35 0.22 1.09 16 25 C -0.04 0.24 10.09 22.44 0.23 0.47 16 26 C 0.57 3.57 8.02 86.82 0.70 4.27 16 27 O -0.49 -6.00 17.44 -3.54 -0.06 -6.06 16 28 C 0.05 0.20 6.32 72.07 0.46 0.66 16 29 O -0.38 -2.29 10.43 -121.89 -1.27 -3.56 16 30 C -0.20 0.09 9.04 22.36 0.20 0.29 16 31 C -0.05 0.04 9.68 22.26 0.22 0.25 16 32 H 0.40 -3.27 8.70 -74.05 -0.64 -3.92 16 33 H 0.12 -0.11 7.96 -2.39 -0.02 -0.13 16 34 H -0.29 -1.50 7.11 99.48 0.71 -0.79 16 35 H -0.29 -1.80 7.11 99.48 0.71 -1.10 16 36 H 0.15 -0.10 4.90 -2.91 -0.01 -0.11 16 37 H 0.11 -0.59 7.67 -2.38 -0.02 -0.61 16 38 H 0.11 -0.55 7.66 -2.39 -0.02 -0.56 16 39 H 0.11 0.34 8.14 -2.39 -0.02 0.32 16 40 H 0.08 0.24 6.69 -2.38 -0.02 0.23 16 41 H 0.15 -0.99 8.06 -2.91 -0.02 -1.01 16 42 H 0.18 -2.80 8.06 -2.91 -0.02 -2.82 16 43 H 0.18 -2.94 8.06 -2.91 -0.02 -2.97 16 44 H 0.16 -1.38 8.06 -2.91 -0.02 -1.41 16 45 H 0.11 0.31 8.14 -2.39 -0.02 0.29 16 46 H 0.08 0.23 6.68 -2.39 -0.02 0.22 16 47 H 0.16 -1.03 6.30 -2.91 -0.02 -1.05 16 48 H 0.15 -0.61 8.06 -2.91 -0.02 -0.63 16 Total: 0.00 -25.78 420.51 -0.08 -25.86 By element: Atomic # 1 Polarization: -15.89 SS G_CDS: 0.46 Total: -15.43 kcal Atomic # 6 Polarization: 9.09 SS G_CDS: 4.63 Total: 13.72 kcal Atomic # 7 Polarization: -2.57 SS G_CDS: -1.87 Total: -4.45 kcal Atomic # 8 Polarization: -15.36 SS G_CDS: -5.26 Total: -20.62 kcal Atomic # 14 Polarization: -0.44 SS G_CDS: 2.04 Total: 1.60 kcal Atomic # 17 Polarization: -0.61 SS G_CDS: -0.08 Total: -0.68 kcal Total: -25.78 -0.08 -25.86 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_2162996_13594088.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -96.172 kcal (2) G-P(sol) polarization free energy of solvation -25.779 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.951 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.080 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.859 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.031 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.72 seconds