Wall clock time and date at job start Mon Mar 8 2021 15:19:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53001 * 109.47079 * 2 1 4 4 C 1.53007 * 109.46794 * 240.00561 * 2 1 3 5 5 Si 1.86295 * 109.47498 * 120.00396 * 2 1 3 6 6 C 1.86302 * 109.46843 * 299.99836 * 5 2 1 7 7 C 1.86300 * 109.47148 * 179.97438 * 5 2 1 8 8 O 1.63100 * 109.47170 * 59.99892 * 5 2 1 9 9 C 1.42900 * 114.00257 * 180.02562 * 8 5 2 10 10 C 1.52995 * 109.47569 * 180.02562 * 9 8 5 11 11 C 1.52996 * 109.47266 * 179.97438 * 10 9 8 12 12 O 1.42904 * 109.47191 * 179.97438 * 11 10 9 13 13 C 1.35924 * 117.00161 * 179.97438 * 12 11 10 14 14 C 1.38666 * 120.05984 * 0.02562 * 13 12 11 15 15 C 1.38191 * 119.96042 * 180.02562 * 14 13 12 16 16 C 1.38236 * 120.07105 * 0.02562 * 15 14 13 17 17 C 1.50706 * 119.93469 * 179.97438 * 16 15 14 18 18 O 1.42895 * 109.46938 * 299.99527 * 17 16 15 19 19 Si 1.86299 * 109.46748 * 179.97438 * 17 16 15 20 20 H 1.48503 * 109.47188 * 60.00070 * 19 17 16 21 21 H 1.48506 * 109.47139 * 179.97438 * 19 17 16 22 22 H 1.48505 * 109.47505 * 299.99883 * 19 17 16 23 23 C 1.38288 * 120.12567 * 0.22877 * 16 15 14 24 24 C 1.38217 * 120.03547 * 359.49507 * 23 16 15 25 25 Cl 1.73601 * 120.03754 * 180.23016 * 24 23 16 26 26 H 1.09009 * 109.47058 * 299.99481 * 1 2 3 27 27 H 1.09003 * 109.47617 * 59.99703 * 1 2 3 28 28 H 1.09000 * 109.47276 * 179.97438 * 1 2 3 29 29 H 1.08993 * 109.46911 * 180.02562 * 3 2 1 30 30 H 1.09003 * 109.47138 * 300.00590 * 3 2 1 31 31 H 1.08994 * 109.46866 * 59.99935 * 3 2 1 32 32 H 1.09005 * 109.46680 * 299.99441 * 4 2 1 33 33 H 1.08993 * 109.47315 * 59.99408 * 4 2 1 34 34 H 1.08993 * 109.47184 * 179.97438 * 4 2 1 35 35 H 1.09000 * 109.46612 * 179.97438 * 6 5 2 36 36 H 1.09000 * 109.47144 * 299.99733 * 6 5 2 37 37 H 1.08998 * 109.46936 * 60.00069 * 6 5 2 38 38 H 1.08999 * 109.47170 * 299.99543 * 7 5 2 39 39 H 1.09000 * 109.47380 * 59.99936 * 7 5 2 40 40 H 1.09000 * 109.47007 * 180.02562 * 7 5 2 41 41 H 1.09000 * 109.47083 * 59.99602 * 9 8 5 42 42 H 1.09007 * 109.46858 * 299.99795 * 9 8 5 43 43 H 1.09003 * 109.46996 * 59.99233 * 10 9 8 44 44 H 1.09007 * 109.46803 * 299.99755 * 10 9 8 45 45 H 1.09000 * 109.46982 * 59.99775 * 11 10 9 46 46 H 1.08993 * 109.47433 * 299.99591 * 11 10 9 47 47 H 1.08007 * 120.01714 * 359.97438 * 14 13 12 48 48 H 1.08000 * 119.96298 * 179.97438 * 15 14 13 49 49 H 1.09000 * 109.47161 * 59.99793 * 17 16 15 50 50 H 0.96709 * 113.99981 * 180.02562 * 18 17 16 51 51 H 1.07998 * 119.98221 * 179.72428 * 23 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0399 -0.7212 -1.2494 5 14 2.1511 -0.8783 1.5210 6 6 1.5301 -0.0001 3.0422 7 6 4.0141 -0.8789 1.5205 8 8 1.6074 -2.4160 1.5209 9 6 2.0287 -3.1815 2.6517 10 6 1.4640 -4.5996 2.5467 11 6 1.9155 -5.4193 3.7571 12 8 1.3876 -6.7436 3.6593 13 6 1.6973 -7.6070 4.6623 14 6 2.4922 -7.1883 5.7186 15 6 2.8063 -8.0680 6.7370 16 6 2.3294 -9.3651 6.7035 17 6 2.6743 -10.3221 7.8155 18 8 4.0931 -10.4768 7.8877 19 14 1.8850 -11.9756 7.4787 20 1 2.3903 -12.5120 6.1894 21 1 2.2254 -12.9189 8.5741 22 1 0.4106 -11.8144 7.4039 23 6 1.5408 -9.7876 5.6491 24 6 1.2189 -8.9102 4.6309 25 17 0.2239 -9.4389 3.3102 26 1 -0.3634 0.5138 0.8901 27 1 -0.3634 0.5139 -0.8899 28 1 -0.3634 -1.0277 -0.0005 29 1 3.1299 1.4425 -0.0005 30 1 1.6765 1.9564 -0.8899 31 1 1.6766 1.9563 0.8899 32 1 1.6766 -1.7489 -1.2493 33 1 1.6765 -0.2074 -2.1393 34 1 3.1298 -0.7208 -1.2497 35 1 1.8932 -0.5143 3.9321 36 1 1.8935 1.0276 3.0422 37 1 0.4401 -0.0001 3.0422 38 1 4.3770 -1.3930 0.6305 39 1 4.3778 0.1486 1.5203 40 1 4.3774 -1.3932 2.4102 41 1 1.6639 -2.7114 3.5650 42 1 3.1176 -3.2254 2.6755 43 1 1.8291 -5.0693 1.6334 44 1 0.3750 -4.5561 2.5227 45 1 1.5507 -4.9496 4.6705 46 1 3.0043 -5.4627 3.7807 47 1 2.8663 -6.1754 5.7449 48 1 3.4258 -7.7421 7.5594 49 1 2.3031 -9.9286 8.7618 50 1 4.3879 -11.0810 8.5829 51 1 1.1731 -10.8028 5.6231 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_2162996_18527724.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 15:19:12 Heat of formation + Delta-G solvation = -160.287722 kcal Electronic energy + Delta-G solvation = -27465.112621 eV Core-core repulsion = 23513.621459 eV Total energy + Delta-G solvation = -3951.491161 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 360.148 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -41.39732 -39.37159 -38.28000 -37.62134 -37.04935 -36.86708 -33.73562 -32.15155 -31.57043 -29.48772 -29.13714 -27.89992 -27.41968 -27.27795 -26.03147 -24.21030 -22.60313 -22.17758 -20.45946 -19.47855 -18.58681 -17.94538 -17.58584 -17.28386 -17.06932 -16.36278 -16.26955 -16.02030 -15.74610 -15.35524 -14.95050 -14.91109 -14.80735 -14.72653 -14.53747 -14.32456 -14.02254 -13.99693 -13.69879 -13.49288 -13.34384 -13.18775 -13.12881 -12.96705 -12.95861 -12.77918 -12.55443 -12.43892 -12.33116 -12.15631 -12.10596 -11.97236 -11.82762 -11.75172 -11.72855 -11.67181 -11.46828 -11.38172 -10.42937 -10.42111 -10.11261 -9.97489 -9.18943 0.06241 0.13547 1.07884 1.20687 1.30392 1.38266 1.45806 1.68985 1.86742 1.99980 2.01191 2.42398 2.43890 3.28933 3.59582 3.71822 3.74973 3.79156 3.95109 3.97187 4.07959 4.08812 4.09462 4.15831 4.21583 4.25605 4.30708 4.41717 4.44099 4.61335 4.62363 4.65164 4.67155 4.67667 4.78119 4.82884 4.83868 4.95991 4.97199 4.99528 5.07886 5.07959 5.08078 5.17130 5.31009 5.33360 5.38343 5.38486 5.47571 5.48411 5.50367 5.55189 6.19496 6.50267 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C -0.375 4.375 3 C -0.137 4.137 4 C -0.134 4.134 5 Si 1.288 2.712 6 C -0.511 4.511 7 C -0.511 4.511 8 O -0.623 6.623 9 C 0.090 3.910 10 C -0.123 4.123 11 C 0.056 3.944 12 O -0.298 6.298 13 C 0.147 3.853 14 C -0.198 4.198 15 C -0.042 4.042 16 C -0.103 4.103 17 C -0.074 4.074 18 O -0.545 6.545 19 Si 0.934 3.066 20 H -0.244 1.244 21 H -0.253 1.253 22 H -0.246 1.246 23 C -0.077 4.077 24 C -0.064 4.064 25 Cl -0.050 7.050 26 H 0.054 0.946 27 H 0.053 0.947 28 H 0.060 0.940 29 H 0.056 0.944 30 H 0.056 0.944 31 H 0.056 0.944 32 H 0.060 0.940 33 H 0.053 0.947 34 H 0.054 0.946 35 H 0.066 0.934 36 H 0.074 0.926 37 H 0.073 0.927 38 H 0.073 0.927 39 H 0.074 0.926 40 H 0.066 0.934 41 H 0.058 0.942 42 H 0.058 0.942 43 H 0.087 0.913 44 H 0.087 0.913 45 H 0.068 0.932 46 H 0.068 0.932 47 H 0.141 0.859 48 H 0.137 0.863 49 H 0.080 0.920 50 H 0.382 0.618 51 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.636 1.531 4.009 4.593 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.191 4.191 2 C -0.419 4.419 3 C -0.194 4.194 4 C -0.192 4.192 5 Si 1.419 2.581 6 C -0.613 4.613 7 C -0.613 4.613 8 O -0.582 6.582 9 C 0.014 3.986 10 C -0.161 4.161 11 C -0.019 4.019 12 O -0.211 6.211 13 C 0.100 3.900 14 C -0.217 4.217 15 C -0.060 4.060 16 C -0.103 4.103 17 C -0.185 4.185 18 O -0.351 6.351 19 Si 0.756 3.244 20 H -0.167 1.167 21 H -0.177 1.177 22 H -0.170 1.170 23 C -0.095 4.095 24 C -0.092 4.092 25 Cl -0.021 7.021 26 H 0.073 0.927 27 H 0.072 0.928 28 H 0.079 0.921 29 H 0.075 0.925 30 H 0.075 0.925 31 H 0.075 0.925 32 H 0.079 0.921 33 H 0.072 0.928 34 H 0.073 0.927 35 H 0.085 0.915 36 H 0.093 0.907 37 H 0.092 0.908 38 H 0.092 0.908 39 H 0.093 0.907 40 H 0.085 0.915 41 H 0.076 0.924 42 H 0.076 0.924 43 H 0.105 0.895 44 H 0.105 0.895 45 H 0.086 0.914 46 H 0.087 0.913 47 H 0.158 0.842 48 H 0.155 0.845 49 H 0.098 0.902 50 H 0.229 0.771 51 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 0.857 0.891 2.888 3.141 hybrid contribution 0.521 0.632 0.684 1.068 sum 1.378 1.523 3.572 4.121 Atomic orbital electron populations 1.21515 0.93782 1.02048 1.01804 1.25789 1.00723 1.02641 1.12721 1.21555 1.00769 0.94898 1.02166 1.21515 1.00599 1.00280 0.96759 0.76701 0.63007 0.53325 0.65023 1.27035 1.07065 1.09521 1.17692 1.27037 1.25035 1.04774 1.04480 1.85333 1.79340 1.46073 1.47463 1.21791 0.98111 0.91478 0.87177 1.21516 1.03492 0.93126 0.97953 1.22786 0.98777 0.80574 0.99742 1.86151 1.70426 1.21864 1.42698 1.18649 0.94266 0.88740 0.88311 1.21283 1.03168 1.01754 0.95497 1.20881 0.95789 0.91793 0.97528 1.19068 1.00442 0.94959 0.95867 1.24584 0.87270 1.07394 0.99210 1.86497 1.19300 1.69766 1.59507 0.85915 0.80392 0.76126 0.81981 1.16724 1.17677 1.16997 1.20723 0.97893 0.98983 0.91929 1.19994 1.02853 0.92226 0.94095 1.98390 1.67687 1.90016 1.46026 0.92702 0.92776 0.92127 0.92513 0.92484 0.92514 0.92122 0.92776 0.92699 0.91507 0.90667 0.90824 0.90819 0.90670 0.91504 0.92365 0.92365 0.89479 0.89480 0.91355 0.91338 0.84152 0.84514 0.90247 0.77072 0.84648 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 0.00 7.85 37.16 0.29 0.29 16 2 C -0.38 0.16 0.53 -90.62 -0.05 0.11 16 3 C -0.14 0.11 7.85 37.16 0.29 0.40 16 4 C -0.13 0.00 7.85 37.16 0.29 0.29 16 5 Si 1.29 -1.84 8.45 -169.99 -1.44 -3.28 16 6 C -0.51 0.62 8.50 101.05 0.86 1.48 16 7 C -0.51 0.59 8.50 101.05 0.86 1.45 16 8 O -0.62 0.09 8.56 -35.23 -0.30 -0.21 16 9 C 0.09 -0.16 5.12 37.16 0.19 0.03 16 10 C -0.12 0.12 5.95 -26.74 -0.16 -0.04 16 11 C 0.06 -0.07 4.74 37.16 0.18 0.10 16 12 O -0.30 -0.56 9.60 -19.50 -0.19 -0.75 16 13 C 0.15 0.30 6.68 -39.20 -0.26 0.04 16 14 C -0.20 -0.04 9.04 -39.44 -0.36 -0.40 16 15 C -0.04 -0.01 9.60 -39.60 -0.38 -0.39 16 16 C -0.10 -0.10 5.42 -104.60 -0.57 -0.67 16 17 C -0.07 0.07 2.81 36.01 0.10 0.17 16 18 O -0.54 0.32 12.74 -35.23 -0.45 -0.13 16 19 Si 0.93 -0.63 25.07 -169.99 -4.26 -4.89 16 20 H -0.24 -0.23 7.11 56.52 0.40 0.17 16 21 H -0.25 0.19 7.11 56.52 0.40 0.59 16 22 H -0.25 0.01 7.11 56.52 0.40 0.42 16 23 C -0.08 -0.15 8.45 -39.57 -0.33 -0.48 16 24 C -0.06 -0.18 6.33 -39.36 -0.25 -0.43 16 25 Cl -0.05 -0.17 28.51 -51.86 -1.48 -1.64 16 26 H 0.05 -0.03 7.79 -51.92 -0.40 -0.44 16 27 H 0.05 0.02 8.14 -51.93 -0.42 -0.41 16 28 H 0.06 0.02 7.97 -51.93 -0.41 -0.40 16 29 H 0.06 -0.08 7.79 -51.93 -0.40 -0.48 16 30 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 31 H 0.06 -0.08 7.79 -51.93 -0.40 -0.49 16 32 H 0.06 0.02 7.97 -51.93 -0.41 -0.39 16 33 H 0.05 0.02 8.14 -51.93 -0.42 -0.41 16 34 H 0.05 -0.03 7.79 -51.93 -0.40 -0.44 16 35 H 0.07 -0.11 7.48 -51.93 -0.39 -0.50 16 36 H 0.07 -0.10 7.79 -51.93 -0.40 -0.51 16 37 H 0.07 -0.06 7.79 -51.93 -0.40 -0.47 16 38 H 0.07 -0.06 7.79 -51.93 -0.40 -0.46 16 39 H 0.07 -0.10 7.79 -51.93 -0.40 -0.51 16 40 H 0.07 -0.11 7.48 -51.93 -0.39 -0.50 16 41 H 0.06 -0.19 7.21 -51.93 -0.37 -0.56 16 42 H 0.06 -0.19 7.21 -51.93 -0.37 -0.56 16 43 H 0.09 -0.02 8.14 -51.93 -0.42 -0.44 16 44 H 0.09 -0.03 8.14 -51.93 -0.42 -0.45 16 45 H 0.07 -0.19 7.66 -51.93 -0.40 -0.59 16 46 H 0.07 -0.18 7.66 -51.93 -0.40 -0.58 16 47 H 0.14 -0.33 6.30 -52.48 -0.33 -0.66 16 48 H 0.14 -0.18 8.06 -52.49 -0.42 -0.61 16 49 H 0.08 -0.23 7.96 -51.93 -0.41 -0.65 16 50 H 0.38 -1.87 8.74 45.56 0.40 -1.47 16 51 H 0.14 0.13 4.87 -52.49 -0.26 -0.13 16 LS Contribution 419.08 15.07 6.32 6.32 Total: 0.00 -5.57 419.08 -9.41 -14.99 By element: Atomic # 1 Polarization: -4.04 SS G_CDS: -8.32 Total: -12.36 kcal Atomic # 6 Polarization: 1.25 SS G_CDS: 0.70 Total: 1.95 kcal Atomic # 8 Polarization: -0.15 SS G_CDS: -0.94 Total: -1.09 kcal Atomic # 14 Polarization: -2.47 SS G_CDS: -5.70 Total: -8.16 kcal Atomic # 17 Polarization: -0.17 SS G_CDS: -1.48 Total: -1.64 kcal Total LS contribution 6.32 Total: 6.32 kcal Total: -5.57 -9.41 -14.99 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_2162996_18527724.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -145.300 kcal (2) G-P(sol) polarization free energy of solvation -5.573 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -150.873 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.414 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.987 kcal (6) G-S(sol) free energy of system = (1) + (5) -160.288 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds