Wall clock time and date at job start Mon Mar 8 2021 14:28:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86299 * 109.47003 * 2 1 4 4 C 1.50701 * 109.47472 * 240.00456 * 2 1 3 5 5 C 1.38243 * 119.97496 * 119.99850 * 4 2 1 6 6 C 1.38286 * 120.11138 * 180.02562 * 5 4 2 7 7 C 1.38130 * 120.05232 * 0.02562 * 6 5 4 8 8 N 1.48009 * 120.02567 * 179.97438 * 7 6 5 9 9 O 1.21801 * 119.99870 * 359.97438 * 8 7 6 10 10 O 1.21793 * 119.99999 * 179.97438 * 8 7 6 11 11 C 1.38745 * 119.94803 * 359.97438 * 7 6 5 12 12 O 1.35902 * 120.05854 * 179.97438 * 11 7 6 13 13 C 1.42900 * 117.00143 * 180.02562 * 12 11 7 14 14 C 1.52998 * 109.46923 * 180.02562 * 13 12 11 15 15 H 1.08997 * 109.47655 * 54.99345 * 14 13 12 16 16 C 1.52998 * 109.47106 * 174.99961 * 14 13 12 17 17 C 1.52998 * 109.47429 * 179.97438 * 16 14 13 18 18 C 1.52999 * 109.46788 * 299.99799 * 17 16 14 19 19 H 1.09008 * 109.47201 * 299.99563 * 18 17 16 20 20 O 1.42903 * 109.47256 * 180.02562 * 18 17 16 21 21 C 1.53001 * 109.47329 * 59.99953 * 18 17 16 22 22 C 1.52998 * 109.46901 * 299.99578 * 21 18 17 23 23 C 1.38172 * 119.96797 * 300.25301 * 4 2 1 24 24 H 0.96698 * 113.99972 * 299.99432 * 1 2 3 25 25 H 1.09002 * 109.47231 * 119.99851 * 2 1 3 26 26 H 1.48496 * 110.00224 * 300.00261 * 3 2 1 27 27 H 1.48502 * 110.00285 * 61.31930 * 3 2 1 28 28 H 1.07990 * 119.94811 * 359.97438 * 5 4 2 29 29 H 1.07998 * 119.97819 * 179.97438 * 6 5 4 30 30 H 1.08993 * 109.47628 * 59.99737 * 13 12 11 31 31 H 1.09006 * 109.46786 * 299.99875 * 13 12 11 32 32 H 1.08997 * 109.47366 * 59.99207 * 16 14 13 33 33 H 1.09009 * 109.46785 * 299.99476 * 16 14 13 34 34 H 1.08997 * 109.47384 * 179.97438 * 17 16 14 35 35 H 1.08997 * 109.47329 * 59.99386 * 17 16 14 36 36 H 0.96700 * 114.00311 * 180.02562 * 20 18 17 37 37 H 1.08997 * 109.47215 * 60.00152 * 21 18 17 38 38 H 1.08999 * 109.47164 * 180.02562 * 21 18 17 39 39 H 1.08997 * 109.47655 * 300.00305 * 22 21 18 40 40 H 1.09005 * 109.46908 * 179.97438 * 22 21 18 41 41 H 1.08002 * 120.02862 * 359.97438 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 2.7262 -0.0379 -2.1401 6 6 3.1883 -0.6867 -3.2704 7 6 2.8562 -2.0088 -3.4935 8 7 3.3507 -2.7026 -4.7038 9 8 4.0504 -2.1075 -5.5038 10 8 3.0580 -3.8685 -4.8998 11 6 2.0587 -2.6859 -2.5822 12 8 1.7302 -3.9866 -2.7997 13 6 0.9054 -4.6201 -1.8196 14 6 0.6445 -6.0699 -2.2328 15 1 1.5949 -6.5782 -2.3953 16 6 -0.1329 -6.7838 -1.1252 17 6 -0.3944 -8.2335 -1.5386 18 6 -1.2126 -8.2554 -2.8313 19 1 -2.1629 -7.7469 -2.6685 20 8 -1.4574 -9.6094 -3.2172 21 6 -0.4353 -7.5415 -3.9390 22 6 -0.1738 -6.0918 -3.5256 23 6 1.5930 -2.0316 -1.4513 24 1 -0.3933 0.4416 0.7651 25 1 1.7924 -0.5138 0.8900 26 1 1.5614 2.4679 -1.2084 27 1 1.5879 2.4586 1.2242 28 1 2.9859 0.9961 -1.9681 29 1 3.8087 -0.1592 -3.9798 30 1 -0.0424 -4.0875 -1.7431 31 1 1.4107 -4.6032 -0.8539 32 1 -1.0833 -6.2756 -0.9627 33 1 0.4499 -6.7679 -0.2041 34 1 -0.9478 -8.7422 -0.7493 35 1 0.5558 -8.7420 -1.7014 36 1 -1.9720 -9.6996 -4.0309 37 1 0.5150 -8.0500 -4.1018 38 1 -1.0183 -7.5567 -4.8598 39 1 -1.1240 -5.5833 -3.3627 40 1 0.3804 -5.5833 -4.3145 41 1 0.9690 -2.5554 -0.7422 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_2392260_16737254.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 14:28:47 Heat of formation + Delta-G solvation = -102.843220 kcal Electronic energy + Delta-G solvation = -26244.377510 eV Core-core repulsion = 22287.216506 eV Total energy + Delta-G solvation = -3957.161004 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.134 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -43.01777 -41.61804 -40.31027 -39.30436 -37.93868 -37.21456 -36.70998 -33.72329 -32.33260 -31.89020 -31.27238 -28.81559 -27.09871 -25.49566 -24.12684 -23.83973 -22.83029 -22.20319 -20.99373 -20.39173 -19.44968 -19.00261 -18.70603 -18.31986 -18.19229 -17.53165 -17.27381 -16.76966 -16.46228 -16.16706 -15.79964 -15.53018 -15.29924 -14.86752 -14.59364 -14.35851 -14.22261 -14.04244 -13.61886 -13.38619 -13.28112 -13.09148 -12.89011 -12.67147 -12.26247 -12.23625 -12.14863 -12.08056 -11.88579 -11.81026 -11.69578 -11.68717 -11.17124 -11.02202 -10.73142 -10.61763 -9.87404 -5.22669 -1.13227 -0.21898 0.36666 0.56049 0.92280 1.34742 1.60780 1.70309 1.98557 2.78350 3.08151 3.15541 3.18622 3.47399 3.50758 3.57666 3.61913 3.67535 3.75868 3.90104 3.97963 3.98772 4.11279 4.22621 4.24046 4.25712 4.31870 4.39648 4.40118 4.48339 4.51179 4.70818 4.81012 4.87462 4.97307 5.00256 5.03377 5.09322 5.12978 5.28887 5.36382 5.52245 5.84674 6.06368 6.70364 6.91290 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.088 4.088 3 Si 0.688 3.312 4 C 0.019 3.981 5 C -0.155 4.155 6 C -0.010 4.010 7 C -0.081 4.081 8 N 0.035 4.965 9 O -0.177 6.177 10 O -0.134 6.134 11 C 0.202 3.798 12 O -0.275 6.275 13 C 0.054 3.946 14 C -0.086 4.086 15 H 0.090 0.910 16 C -0.109 4.109 17 C -0.111 4.111 18 C 0.103 3.897 19 H 0.054 0.946 20 O -0.569 6.569 21 C -0.151 4.151 22 C -0.113 4.113 23 C -0.189 4.189 24 H 0.387 0.613 25 H 0.089 0.911 26 H -0.249 1.249 27 H -0.254 1.254 28 H 0.151 0.849 29 H 0.166 0.834 30 H 0.071 0.929 31 H 0.071 0.929 32 H 0.068 0.932 33 H 0.074 0.926 34 H 0.073 0.927 35 H 0.073 0.927 36 H 0.379 0.621 37 H 0.074 0.926 38 H 0.067 0.933 39 H 0.062 0.938 40 H 0.080 0.920 41 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.979 3.300 6.282 7.163 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.197 4.197 3 Si 0.588 3.412 4 C 0.019 3.981 5 C -0.174 4.174 6 C -0.029 4.029 7 C -0.165 4.165 8 N 0.554 4.446 9 O -0.386 6.386 10 O -0.355 6.355 11 C 0.152 3.848 12 O -0.185 6.185 13 C -0.020 4.020 14 C -0.104 4.104 15 H 0.109 0.891 16 C -0.147 4.147 17 C -0.148 4.148 18 C 0.044 3.956 19 H 0.072 0.928 20 O -0.375 6.375 21 C -0.189 4.189 22 C -0.151 4.151 23 C -0.208 4.208 24 H 0.236 0.764 25 H 0.107 0.893 26 H -0.173 1.173 27 H -0.179 1.179 28 H 0.169 0.831 29 H 0.183 0.817 30 H 0.089 0.911 31 H 0.090 0.910 32 H 0.087 0.913 33 H 0.092 0.908 34 H 0.092 0.908 35 H 0.092 0.908 36 H 0.227 0.773 37 H 0.093 0.907 38 H 0.086 0.914 39 H 0.080 0.920 40 H 0.099 0.901 41 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges -0.935 3.924 6.679 7.803 hybrid contribution -1.447 -0.105 -0.061 1.452 sum -2.383 3.819 6.618 8.004 Atomic orbital electron populations 1.86564 1.16896 1.80468 1.50245 1.24949 0.85303 1.11836 0.97589 0.94888 0.91465 0.73664 0.81184 1.19491 0.92184 0.92769 0.93687 1.20873 1.01521 1.00915 0.94050 1.20891 0.94941 0.90203 0.96873 1.20577 1.10333 0.94865 0.90760 1.43286 0.98989 1.01029 1.01305 1.94552 1.35190 1.67938 1.40961 1.94601 1.60489 0.99616 1.80821 1.18630 0.90054 0.84748 0.91367 1.86412 1.64816 1.19647 1.47651 1.23203 0.93856 0.94183 0.90788 1.21233 1.00832 0.92069 0.96290 0.89138 1.21479 1.00460 0.95181 0.97573 1.21427 1.00939 0.96143 0.96340 1.21849 0.97133 0.82350 0.94286 0.92831 1.86512 1.77433 1.26322 1.47233 1.22264 1.01900 0.96193 0.98557 1.21538 0.99866 0.96458 0.97214 1.21150 1.05405 0.95903 0.98364 0.76413 0.89330 1.17316 1.17922 0.83138 0.81672 0.91071 0.91049 0.91293 0.90765 0.90811 0.90803 0.77332 0.90691 0.91440 0.91961 0.90099 0.82910 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.93 12.74 -35.23 -0.45 0.48 16 2 C -0.09 0.26 2.81 36.01 0.10 0.36 16 3 Si 0.69 -2.38 29.79 -169.99 -5.06 -7.45 16 4 C 0.02 -0.02 5.42 -104.64 -0.57 -0.59 16 5 C -0.16 0.27 8.67 -39.56 -0.34 -0.07 16 6 C -0.01 0.00 9.55 -39.60 -0.38 -0.38 16 7 C -0.08 -0.20 6.87 -79.80 -0.55 -0.75 16 8 N 0.04 0.19 4.45 34.03 0.15 0.34 16 9 O -0.18 -1.05 18.45 -29.46 -0.54 -1.60 16 10 O -0.13 -0.88 17.24 -36.49 -0.63 -1.51 16 11 C 0.20 0.29 6.67 -39.22 -0.26 0.03 16 12 O -0.27 -0.46 7.69 -41.55 -0.32 -0.78 16 13 C 0.05 -0.08 4.12 37.16 0.15 0.08 16 14 C -0.09 0.10 2.43 -90.62 -0.22 -0.12 16 15 H 0.09 -0.02 8.14 -51.93 -0.42 -0.45 16 16 C -0.11 0.24 5.20 -26.73 -0.14 0.10 16 17 C -0.11 0.05 5.57 -26.73 -0.15 -0.09 16 18 C 0.10 -0.01 3.47 -26.73 -0.09 -0.10 16 19 H 0.05 -0.04 8.14 -51.92 -0.42 -0.46 16 20 O -0.57 -0.72 13.32 -35.23 -0.47 -1.19 16 21 C -0.15 0.05 5.55 -26.73 -0.15 -0.10 16 22 C -0.11 0.05 5.10 -26.73 -0.14 -0.09 16 23 C -0.19 0.11 8.60 -39.43 -0.34 -0.23 16 24 H 0.39 -2.16 8.74 45.56 0.40 -1.76 16 25 H 0.09 -0.44 7.96 -51.93 -0.41 -0.85 16 26 H -0.25 0.08 7.11 56.52 0.40 0.48 16 27 H -0.25 0.33 7.11 56.52 0.40 0.73 16 28 H 0.15 -0.63 4.87 -52.49 -0.26 -0.89 16 29 H 0.17 -0.30 7.61 -52.49 -0.40 -0.70 16 30 H 0.07 -0.16 7.65 -51.93 -0.40 -0.56 16 31 H 0.07 -0.21 7.67 -51.93 -0.40 -0.61 16 32 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 33 H 0.07 -0.22 8.14 -51.92 -0.42 -0.65 16 34 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 35 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 36 H 0.38 -0.94 9.08 45.56 0.41 -0.53 16 37 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 38 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 39 H 0.06 -0.05 8.14 -51.93 -0.42 -0.48 16 40 H 0.08 0.10 7.82 -51.93 -0.41 -0.30 16 41 H 0.15 -0.34 6.30 -52.49 -0.33 -0.67 16 LS Contribution 338.90 15.07 5.11 5.11 Total: 0.00 -8.46 338.90 -10.07 -18.53 By element: Atomic # 1 Polarization: -5.20 SS G_CDS: -4.79 Total: -10.00 kcal Atomic # 6 Polarization: 1.12 SS G_CDS: -3.07 Total: -1.95 kcal Atomic # 7 Polarization: 0.19 SS G_CDS: 0.15 Total: 0.34 kcal Atomic # 8 Polarization: -2.18 SS G_CDS: -2.41 Total: -4.59 kcal Atomic # 14 Polarization: -2.38 SS G_CDS: -5.06 Total: -7.45 kcal Total LS contribution 5.11 Total: 5.11 kcal Total: -8.46 -10.07 -18.53 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_2392260_16737254.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -84.312 kcal (2) G-P(sol) polarization free energy of solvation -8.457 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -92.769 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.074 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.531 kcal (6) G-S(sol) free energy of system = (1) + (5) -102.843 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds