Wall clock time and date at job start Mon Mar 8 2021 14:53:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86301 * 109.47408 * 2 1 4 4 C 1.50701 * 109.47418 * 120.00806 * 2 1 3 5 5 C 1.38267 * 119.94532 * 64.99409 * 4 2 1 6 6 C 1.38140 * 120.05428 * 179.97438 * 5 4 2 7 7 C 1.38740 * 119.94432 * 0.02562 * 6 5 4 8 8 O 1.35905 * 120.05053 * 179.97438 * 7 6 5 9 9 C 1.42898 * 116.99222 * 179.97438 * 8 7 6 10 10 C 1.53003 * 109.46777 * 180.02562 * 9 8 7 11 11 H 1.08998 * 112.90553 * 316.24621 * 10 9 8 12 12 C 1.53778 * 113.61726 * 87.50467 * 10 9 8 13 13 C 1.53778 * 87.08449 * 139.98071 * 12 10 9 14 14 H 1.09000 * 113.61263 * 89.11673 * 13 12 10 15 15 O 1.42902 * 113.61375 * 220.02054 * 13 12 10 16 16 C 1.53784 * 87.08081 * 334.56700 * 13 12 10 17 17 C 1.38726 * 119.88985 * 0.27030 * 7 6 5 18 18 C 1.38148 * 119.93903 * 359.47551 * 17 7 6 19 19 H 0.96695 * 114.00194 * 59.99205 * 1 2 3 20 20 H 1.09005 * 109.46999 * 240.00428 * 2 1 3 21 21 H 1.48493 * 110.00111 * 298.68575 * 3 2 1 22 22 H 1.48504 * 109.99692 * 60.00527 * 3 2 1 23 23 H 1.08001 * 119.96825 * 359.97438 * 5 4 2 24 24 H 1.07997 * 120.03010 * 180.02562 * 6 5 4 25 25 H 1.08996 * 109.47396 * 60.00309 * 9 8 7 26 26 H 1.09005 * 109.47610 * 299.99705 * 9 8 7 27 27 H 1.08999 * 113.61111 * 254.53134 * 12 10 9 28 28 H 1.08999 * 113.61280 * 25.34517 * 12 10 9 29 29 H 0.96700 * 113.99432 * 277.49158 * 15 13 12 30 30 H 1.09004 * 113.61451 * 270.88641 * 16 13 12 31 31 H 1.08994 * 113.61477 * 139.97943 * 16 13 12 32 32 H 1.07998 * 120.03140 * 179.72177 * 17 7 6 33 33 H 1.08013 * 119.96798 * 180.23245 * 18 17 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7106 1.2303 5 6 1.6840 -2.0607 1.3970 6 6 2.1439 -2.7144 2.5237 7 6 2.8541 -2.0149 3.4887 8 8 3.3072 -2.6558 4.5982 9 6 4.0314 -1.8728 5.5492 10 6 4.4576 -2.7595 6.7210 11 1 3.6643 -3.4262 7.0590 12 6 5.8047 -3.4674 6.4996 13 6 6.1133 -3.1723 7.9770 14 1 5.7726 -3.9519 8.6583 15 8 7.4674 -2.7809 8.2118 16 6 5.1406 -1.9867 7.8617 17 6 3.0957 -0.6591 3.3221 18 6 2.6381 -0.0111 2.1910 19 1 -0.3933 0.4418 -0.7649 20 1 1.7922 -0.5138 -0.8901 21 1 1.5879 2.4586 -1.2241 22 1 1.5616 2.4678 1.2086 23 1 1.1307 -2.6046 0.6457 24 1 1.9508 -3.7690 2.6533 25 1 3.3957 -1.0667 5.9156 26 1 4.9162 -1.4499 5.0734 27 1 5.7082 -4.5301 6.2776 28 1 6.4619 -2.9473 5.8026 29 1 8.0839 -3.5223 8.2853 30 1 5.6168 -1.0611 7.5382 31 1 4.5079 -1.8541 8.7393 32 1 3.6444 -0.1114 4.0739 33 1 2.8292 1.0437 2.0590 There are 43 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 43 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_26799_11354858.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 14:53:24 Heat of formation + Delta-G solvation = -64.311704 kcal Electronic energy + Delta-G solvation = -16289.370260 eV Core-core repulsion = 13475.971781 eV Total energy + Delta-G solvation = -2813.398479 eV No. of doubly occupied orbitals = 43 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 237.109 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -41.32714 -40.31402 -38.87677 -37.30038 -36.03259 -32.29904 -31.74196 -29.40953 -26.83198 -26.14370 -24.45800 -23.02905 -21.96501 -20.67824 -19.15705 -18.61981 -18.49831 -17.21984 -16.95725 -16.75812 -16.34320 -15.76458 -15.56219 -15.25203 -14.68802 -14.39688 -14.23298 -13.92646 -13.53665 -13.52298 -13.42051 -12.69289 -12.61370 -12.34769 -12.23773 -11.89828 -11.75383 -11.59273 -11.27890 -10.81695 -10.46176 -9.95283 -9.10537 -4.96866 0.37535 0.39758 1.29245 1.58786 1.95075 2.12361 2.69192 3.17869 3.38081 3.40266 3.48216 3.71864 3.79739 3.84894 3.85658 3.97277 4.14481 4.19301 4.29349 4.33730 4.42098 4.50909 4.62187 4.69131 4.70019 4.74887 4.90076 5.02413 5.04892 5.24440 5.30036 5.36052 5.58830 5.78732 6.43037 6.47265 6.64590 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.070 4.070 3 Si 0.680 3.320 4 C -0.113 4.113 5 C -0.052 4.052 6 C -0.152 4.152 7 C 0.137 3.863 8 O -0.312 6.312 9 C 0.070 3.930 10 C -0.110 4.110 11 H 0.105 0.895 12 C -0.163 4.163 13 C 0.076 3.924 14 H 0.085 0.915 15 O -0.560 6.560 16 C -0.120 4.120 17 C -0.205 4.205 18 C -0.074 4.074 19 H 0.379 0.621 20 H 0.075 0.925 21 H -0.261 1.261 22 H -0.256 1.256 23 H 0.131 0.869 24 H 0.133 0.867 25 H 0.066 0.934 26 H 0.067 0.933 27 H 0.074 0.926 28 H 0.091 0.909 29 H 0.380 0.620 30 H 0.094 0.906 31 H 0.080 0.920 32 H 0.132 0.868 33 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.547 -0.722 -0.414 2.680 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.180 4.180 3 Si 0.582 3.418 4 C -0.113 4.113 5 C -0.070 4.070 6 C -0.170 4.170 7 C 0.091 3.909 8 O -0.225 6.225 9 C -0.005 4.005 10 C -0.128 4.128 11 H 0.124 0.876 12 C -0.201 4.201 13 C 0.017 3.983 14 H 0.103 0.897 15 O -0.366 6.366 16 C -0.158 4.158 17 C -0.224 4.224 18 C -0.091 4.091 19 H 0.226 0.774 20 H 0.093 0.907 21 H -0.187 1.187 22 H -0.181 1.181 23 H 0.149 0.851 24 H 0.151 0.849 25 H 0.084 0.916 26 H 0.085 0.915 27 H 0.092 0.908 28 H 0.110 0.890 29 H 0.228 0.772 30 H 0.112 0.888 31 H 0.099 0.901 32 H 0.150 0.850 33 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 2.150 0.203 0.190 2.168 hybrid contribution -0.882 -0.509 -0.495 1.133 sum 1.268 -0.306 -0.305 1.340 Atomic orbital electron populations 1.86598 1.17985 1.80084 1.49726 1.24721 0.84299 1.10743 0.98255 0.95102 0.91714 0.74836 0.80145 1.19126 1.01647 0.94271 0.96262 1.20814 0.96234 0.93545 0.96370 1.20488 1.01871 1.00849 0.93828 1.19043 0.93951 0.90916 0.86970 1.86079 1.68856 1.38423 1.29179 1.22837 0.95442 0.93912 0.88281 1.22329 0.97475 0.98570 0.94436 0.87635 1.23776 0.96509 1.01691 0.98123 1.23294 0.82585 0.97338 0.95110 0.89742 1.86523 1.17837 1.37291 1.94934 1.23072 0.96425 0.98288 0.97991 1.21174 1.06856 0.93848 1.00480 1.20775 0.96506 0.99197 0.92664 0.77357 0.90721 1.18670 1.18094 0.85084 0.84877 0.91571 0.91468 0.90762 0.89025 0.77186 0.88773 0.90119 0.85037 0.85381 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.91 12.81 -35.23 -0.45 -1.36 16 2 C -0.07 -0.03 2.79 36.01 0.10 0.07 16 3 Si 0.68 -0.31 29.85 -169.99 -5.07 -5.39 16 4 C -0.11 -0.22 5.39 -104.60 -0.56 -0.78 16 5 C -0.05 -0.10 9.68 -39.61 -0.38 -0.48 16 6 C -0.15 -0.33 9.99 -39.43 -0.39 -0.73 16 7 C 0.14 0.33 6.69 -39.22 -0.26 0.07 16 8 O -0.31 -0.69 10.14 -19.44 -0.20 -0.89 16 9 C 0.07 -0.02 4.58 37.16 0.17 0.15 16 10 C -0.11 0.10 4.01 -89.80 -0.36 -0.26 16 11 H 0.11 -0.10 8.14 -51.93 -0.42 -0.52 16 12 C -0.16 0.14 7.46 -25.92 -0.19 -0.06 16 13 C 0.08 -0.06 5.21 -25.92 -0.14 -0.20 16 14 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 15 O -0.56 -0.24 13.67 -35.23 -0.48 -0.73 16 16 C -0.12 0.12 7.47 -25.91 -0.19 -0.07 16 17 C -0.20 -0.29 9.04 -39.43 -0.36 -0.65 16 18 C -0.07 -0.10 8.66 -39.61 -0.34 -0.44 16 19 H 0.38 -0.89 8.74 45.56 0.40 -0.49 16 20 H 0.07 -0.09 7.96 -51.93 -0.41 -0.51 16 21 H -0.26 -0.38 7.11 56.52 0.40 0.02 16 22 H -0.26 -0.67 7.05 56.52 0.40 -0.28 16 23 H 0.13 0.09 8.06 -52.49 -0.42 -0.33 16 24 H 0.13 0.13 8.06 -52.49 -0.42 -0.29 16 25 H 0.07 -0.06 7.65 -51.93 -0.40 -0.46 16 26 H 0.07 -0.06 7.38 -51.93 -0.38 -0.44 16 27 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 28 H 0.09 -0.02 7.89 -51.93 -0.41 -0.43 16 29 H 0.38 -1.34 9.12 45.56 0.42 -0.92 16 30 H 0.09 -0.06 8.10 -51.93 -0.42 -0.48 16 31 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 32 H 0.13 -0.07 6.30 -52.49 -0.33 -0.41 16 33 H 0.13 -0.05 4.86 -52.48 -0.26 -0.30 16 LS Contribution 278.26 15.07 4.19 4.19 Total: 0.00 -6.59 278.26 -8.46 -15.05 By element: Atomic # 1 Polarization: -3.97 SS G_CDS: -3.53 Total: -7.50 kcal Atomic # 6 Polarization: -0.46 SS G_CDS: -2.91 Total: -3.38 kcal Atomic # 8 Polarization: -1.85 SS G_CDS: -1.13 Total: -2.98 kcal Atomic # 14 Polarization: -0.31 SS G_CDS: -5.07 Total: -5.39 kcal Total LS contribution 4.19 Total: 4.19 kcal Total: -6.59 -8.46 -15.05 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_26799_11354858.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -49.264 kcal (2) G-P(sol) polarization free energy of solvation -6.590 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.854 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.458 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.048 kcal (6) G-S(sol) free energy of system = (1) + (5) -64.312 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds