Wall clock time and date at job start Mon Mar 8 2021 14:10:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52992 * 109.47482 * 2 1 4 4 C 1.53006 * 109.47127 * 120.00347 * 2 1 3 5 5 O 1.42906 * 109.47321 * 240.00014 * 2 1 3 6 6 C 1.42898 * 113.99821 * 59.99868 * 5 2 1 7 7 H 1.09004 * 112.85036 * 341.19710 * 6 5 2 8 8 C 1.53779 * 113.61251 * 112.50258 * 6 5 2 9 9 C 1.53787 * 87.07995 * 139.98162 * 8 6 5 10 10 H 1.09005 * 113.61390 * 89.11628 * 9 8 6 11 11 C 1.52996 * 113.69158 * 220.00665 * 9 8 6 12 12 O 1.42897 * 109.47350 * 272.53563 * 11 9 8 13 13 C 1.35900 * 116.99915 * 179.97438 * 12 11 9 14 14 C 1.38736 * 120.05707 * 359.73308 * 13 12 11 15 15 C 1.38147 * 119.94191 * 179.69804 * 14 13 12 16 16 C 1.38263 * 120.05641 * 0.59436 * 15 14 13 17 17 C 1.50700 * 119.94401 * 179.70059 * 16 15 14 18 18 O 1.42896 * 109.47203 * 244.97453 * 17 16 15 19 19 Si 1.86305 * 109.47215 * 4.97962 * 17 16 15 20 20 C 1.38269 * 120.11195 * 359.67751 * 16 15 14 21 21 C 1.38142 * 120.05240 * 0.02562 * 20 16 15 22 22 C 1.53777 * 113.61489 * 210.00161 * 6 5 2 23 23 H 1.09002 * 109.47153 * 59.99783 * 1 2 3 24 24 H 1.09001 * 109.46832 * 299.99974 * 1 2 3 25 25 H 1.09004 * 109.47261 * 179.97438 * 1 2 3 26 26 H 1.09001 * 109.47066 * 60.00169 * 3 2 1 27 27 H 1.08996 * 109.47747 * 179.97438 * 3 2 1 28 28 H 1.09002 * 109.47103 * 300.00247 * 3 2 1 29 29 H 1.08993 * 109.46955 * 60.00011 * 4 2 1 30 30 H 1.09000 * 109.47050 * 179.97438 * 4 2 1 31 31 H 1.09001 * 109.47002 * 299.99574 * 4 2 1 32 32 H 1.08998 * 113.61977 * 254.52635 * 8 6 5 33 33 H 1.08998 * 113.61693 * 25.43845 * 8 6 5 34 34 H 1.09001 * 109.47307 * 32.54161 * 11 9 8 35 35 H 1.09006 * 109.46634 * 152.53350 * 11 9 8 36 36 H 1.07999 * 120.02413 * 359.97438 * 14 13 12 37 37 H 1.08003 * 119.96981 * 180.31438 * 15 14 13 38 38 H 1.09001 * 109.46757 * 124.97250 * 17 16 15 39 39 H 0.96704 * 114.00018 * 179.97438 * 18 17 16 40 40 H 1.48493 * 110.00148 * 178.68059 * 19 17 16 41 41 H 1.48502 * 109.99312 * 299.99822 * 19 17 16 42 42 H 1.07994 * 119.97263 * 180.02562 * 20 16 15 43 43 H 1.08002 * 120.02598 * 179.97438 * 21 20 16 44 44 H 1.09004 * 113.61750 * 334.57260 * 22 6 5 45 45 H 1.09006 * 113.61639 * 105.47067 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0400 -0.7214 1.2492 5 8 2.0064 -0.6737 -1.1668 6 6 1.5847 -0.0773 -2.3951 7 1 0.7236 0.5797 -2.2729 8 6 2.7334 0.5529 -3.2001 9 6 2.0562 -0.0128 -4.4596 10 1 1.3246 0.6628 -4.9028 11 6 3.0404 -0.5784 -5.4854 12 8 3.4748 0.4681 -6.3561 13 6 4.3589 0.1317 -7.3319 14 6 4.8034 -1.1776 -7.4455 15 6 5.6972 -1.5183 -8.4423 16 6 6.1583 -0.5532 -9.3184 17 6 7.1385 -0.9262 -10.4006 18 8 8.3813 -0.2604 -10.1678 19 14 7.4090 -2.7695 -10.3850 20 6 5.7211 0.7536 -9.2038 21 6 4.8226 1.0980 -8.2126 22 6 1.4333 -1.0834 -3.5482 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3633 0.5138 0.8900 25 1 -0.3634 -1.0277 -0.0005 26 1 1.6768 1.9562 0.8900 27 1 3.1300 1.4424 0.0005 28 1 1.6767 1.9563 -0.8900 29 1 1.6767 -1.7489 1.2492 30 1 3.1300 -0.7217 1.2490 31 1 1.6767 -0.2075 2.1393 32 1 2.7463 1.6421 -3.1632 33 1 3.7072 0.1097 -2.9916 34 1 3.9014 -1.0015 -4.9680 35 1 2.5491 -1.3567 -6.0695 36 1 4.4475 -1.9307 -6.7581 37 1 6.0397 -2.5384 -8.5343 38 1 6.7412 -0.6255 -11.3700 39 1 9.0613 -0.4549 -10.8272 40 1 8.3492 -3.1540 -11.4681 41 1 7.9505 -3.1921 -9.0685 42 1 6.0824 1.5055 -9.8896 43 1 4.4818 2.1189 -8.1232 44 1 2.0515 -1.9739 -3.4348 45 1 0.3964 -1.3151 -3.7922 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_26799_14598384.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 14:10:23 Heat of formation + Delta-G solvation = -68.243699 kcal Electronic energy + Delta-G solvation = -23262.199485 eV Core-core repulsion = 19826.480026 eV Total energy + Delta-G solvation = -3435.719459 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.171 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -41.36715 -40.71442 -39.16309 -38.15054 -37.17739 -33.91484 -32.27113 -31.72154 -29.51218 -28.41293 -28.31738 -26.67240 -26.11920 -24.48175 -23.13191 -21.98982 -20.83420 -20.65080 -19.13592 -18.50083 -17.85885 -17.21340 -16.93827 -16.72518 -16.50126 -15.97127 -15.68309 -15.56443 -15.37721 -14.65524 -14.46072 -14.36772 -14.34904 -13.95736 -13.66378 -13.59214 -13.45560 -13.34090 -13.09390 -13.01793 -12.82117 -12.68371 -12.46321 -12.45486 -12.13101 -12.04016 -11.76705 -11.71464 -11.58434 -11.36503 -11.19684 -10.45025 -10.35780 -9.93544 -9.08399 -4.96020 0.39338 0.41535 1.30298 1.59743 1.96181 2.14519 2.70628 2.73501 3.40702 3.43862 3.53556 3.73573 3.75661 3.84057 3.87019 3.87232 3.94339 3.98580 4.05824 4.11221 4.23660 4.28722 4.34713 4.43407 4.48995 4.54466 4.57712 4.63848 4.72986 4.73976 4.76084 4.77188 4.80654 4.87135 4.89971 4.98730 5.04382 5.08346 5.13739 5.26499 5.28248 5.29956 5.35861 5.38065 5.60418 5.80680 6.39945 6.45083 6.49131 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.105 3.895 3 C -0.176 4.176 4 C -0.139 4.139 5 O -0.362 6.362 6 C 0.062 3.938 7 H 0.092 0.908 8 C -0.148 4.148 9 C -0.110 4.110 10 H 0.104 0.896 11 C 0.071 3.929 12 O -0.312 6.312 13 C 0.138 3.862 14 C -0.205 4.205 15 C -0.074 4.074 16 C -0.113 4.113 17 C -0.070 4.070 18 O -0.537 6.537 19 Si 0.680 3.320 20 C -0.052 4.052 21 C -0.152 4.152 22 C -0.127 4.127 23 H 0.059 0.941 24 H 0.068 0.932 25 H 0.065 0.935 26 H 0.066 0.934 27 H 0.064 0.936 28 H 0.058 0.942 29 H 0.063 0.937 30 H 0.063 0.937 31 H 0.071 0.929 32 H 0.072 0.928 33 H 0.090 0.910 34 H 0.066 0.934 35 H 0.067 0.933 36 H 0.132 0.868 37 H 0.129 0.871 38 H 0.075 0.925 39 H 0.379 0.621 40 H -0.262 1.262 41 H -0.256 1.256 42 H 0.131 0.869 43 H 0.133 0.867 44 H 0.094 0.906 45 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.177 -0.986 -0.427 3.353 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.236 4.236 2 C 0.066 3.934 3 C -0.234 4.234 4 C -0.196 4.196 5 O -0.281 6.281 6 C 0.004 3.996 7 H 0.110 0.890 8 C -0.186 4.186 9 C -0.128 4.128 10 H 0.122 0.878 11 C -0.004 4.004 12 O -0.225 6.225 13 C 0.092 3.908 14 C -0.224 4.224 15 C -0.091 4.091 16 C -0.114 4.114 17 C -0.180 4.180 18 O -0.344 6.344 19 Si 0.582 3.418 20 C -0.070 4.070 21 C -0.171 4.171 22 C -0.164 4.164 23 H 0.078 0.922 24 H 0.087 0.913 25 H 0.084 0.916 26 H 0.085 0.915 27 H 0.083 0.917 28 H 0.077 0.923 29 H 0.082 0.918 30 H 0.082 0.918 31 H 0.089 0.911 32 H 0.091 0.909 33 H 0.109 0.891 34 H 0.084 0.916 35 H 0.085 0.915 36 H 0.150 0.850 37 H 0.146 0.854 38 H 0.093 0.907 39 H 0.226 0.774 40 H -0.187 1.187 41 H -0.181 1.181 42 H 0.149 0.851 43 H 0.151 0.849 44 H 0.112 0.888 45 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -2.905 -1.390 0.252 3.231 hybrid contribution 0.888 0.711 -0.352 1.191 sum -2.017 -0.679 -0.099 2.131 Atomic orbital electron populations 1.22472 0.95636 1.02964 1.02571 1.21540 0.93106 0.92216 0.86567 1.22469 1.02334 0.96068 1.02523 1.21771 1.02030 1.00890 0.94935 1.88035 1.73763 1.53533 1.12765 1.23574 0.97048 0.95603 0.83386 0.88989 1.23619 0.99413 1.01140 0.94395 1.22317 0.98018 0.99301 0.93174 0.87761 1.22834 0.97394 0.89428 0.90742 1.86079 1.57617 1.37619 1.41208 1.19040 0.89884 0.93076 0.88802 1.21177 1.03206 0.95695 1.02280 1.20770 0.96198 0.98703 0.93476 1.19121 0.99491 0.94399 0.98340 1.24721 0.85416 1.09048 0.98825 1.86603 1.22705 1.70144 1.54936 0.95112 0.89751 0.76366 0.80565 1.20811 0.94151 0.95508 0.96502 1.20486 1.00964 0.99305 0.96321 1.23230 1.01825 0.97850 0.93517 0.92222 0.91346 0.91595 0.91533 0.91669 0.92269 0.91762 0.91766 0.91057 0.90932 0.89104 0.91585 0.91513 0.85028 0.85403 0.90733 0.77373 1.18703 1.18079 0.85109 0.84894 0.88790 0.90365 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.12 8.38 37.16 0.31 0.43 16 2 C 0.10 0.03 1.11 -90.62 -0.10 -0.07 16 3 C -0.18 0.06 8.38 37.15 0.31 0.37 16 4 C -0.14 0.02 8.84 37.16 0.33 0.35 16 5 O -0.36 -0.64 10.00 -35.23 -0.35 -0.99 16 6 C 0.06 0.00 2.82 -25.92 -0.07 -0.08 16 7 H 0.09 -0.08 5.54 -51.93 -0.29 -0.37 16 8 C -0.15 -0.01 7.47 -25.92 -0.19 -0.20 16 9 C -0.11 0.07 4.01 -89.81 -0.36 -0.29 16 10 H 0.10 -0.08 8.14 -51.93 -0.42 -0.51 16 11 C 0.07 -0.01 4.58 37.16 0.17 0.16 16 12 O -0.31 -0.74 10.14 -19.43 -0.20 -0.93 16 13 C 0.14 0.35 6.69 -39.22 -0.26 0.09 16 14 C -0.20 -0.31 9.04 -39.43 -0.36 -0.67 16 15 C -0.07 -0.11 8.66 -39.61 -0.34 -0.45 16 16 C -0.11 -0.23 5.39 -104.60 -0.56 -0.79 16 17 C -0.07 -0.04 2.79 36.01 0.10 0.06 16 18 O -0.54 -0.98 12.81 -35.23 -0.45 -1.43 16 19 Si 0.68 -0.26 29.85 -169.99 -5.07 -5.33 16 20 C -0.05 -0.11 9.68 -39.61 -0.38 -0.49 16 21 C -0.15 -0.35 9.99 -39.44 -0.39 -0.75 16 22 C -0.13 0.12 7.47 -25.92 -0.19 -0.07 16 23 H 0.06 -0.06 6.24 -51.93 -0.32 -0.38 16 24 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 25 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 26 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 27 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 28 H 0.06 -0.03 7.02 -51.93 -0.36 -0.39 16 29 H 0.06 0.01 8.14 -51.93 -0.42 -0.42 16 30 H 0.06 0.02 8.14 -51.93 -0.42 -0.41 16 31 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 32 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 33 H 0.09 0.08 7.90 -51.93 -0.41 -0.33 16 34 H 0.07 -0.02 7.36 -51.93 -0.38 -0.41 16 35 H 0.07 -0.08 7.68 -51.93 -0.40 -0.48 16 36 H 0.13 -0.06 6.30 -52.49 -0.33 -0.39 16 37 H 0.13 -0.03 4.86 -52.48 -0.26 -0.29 16 38 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 39 H 0.38 -0.84 8.74 45.56 0.40 -0.45 16 40 H -0.26 -0.41 7.11 56.52 0.40 0.00 16 41 H -0.26 -0.70 7.05 56.52 0.40 -0.30 16 42 H 0.13 0.11 8.06 -52.49 -0.42 -0.32 16 43 H 0.13 0.15 8.06 -52.49 -0.42 -0.27 16 44 H 0.09 -0.06 8.10 -51.93 -0.42 -0.49 16 45 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 LS Contribution 357.47 15.07 5.39 5.39 Total: 0.00 -5.58 357.47 -10.15 -15.73 By element: Atomic # 1 Polarization: -2.58 SS G_CDS: -7.46 Total: -10.04 kcal Atomic # 6 Polarization: -0.39 SS G_CDS: -2.00 Total: -2.40 kcal Atomic # 8 Polarization: -2.35 SS G_CDS: -1.00 Total: -3.35 kcal Atomic # 14 Polarization: -0.26 SS G_CDS: -5.07 Total: -5.33 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -5.58 -10.15 -15.73 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_26799_14598384.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.512 kcal (2) G-P(sol) polarization free energy of solvation -5.581 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.093 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.151 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.732 kcal (6) G-S(sol) free energy of system = (1) + (5) -68.244 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds