Wall clock time and date at job start Mon Mar 8 2021 14:17:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86304 * 109.47462 * 2 1 4 4 C 1.50704 * 109.47027 * 120.00101 * 2 1 3 5 5 C 1.38706 * 120.02570 * 74.99869 * 4 2 1 6 6 O 1.35902 * 120.06137 * 359.97438 * 5 4 2 7 7 C 1.42897 * 117.00165 * 180.02562 * 6 5 4 8 8 C 1.53007 * 109.47038 * 180.02562 * 7 6 5 9 9 H 1.08999 * 109.47127 * 179.97438 * 8 7 6 10 10 O 1.42972 * 109.46757 * 299.99849 * 8 7 6 11 11 C 1.43088 * 113.76710 * 178.79913 * 10 8 7 12 12 C 1.53259 * 108.94206 * 302.01995 * 11 10 8 13 13 H 1.09001 * 109.57909 * 294.59404 * 12 11 10 14 14 N 1.46503 * 109.57846 * 174.33398 * 12 11 10 15 15 C 1.34520 * 124.45856 * 119.99970 * 14 12 11 16 16 O 1.21446 * 125.71234 * 359.97322 * 15 14 12 17 17 C 1.47812 * 108.58028 * 180.02562 * 15 14 12 18 18 C 1.40948 * 105.88101 * 0.02562 * 17 15 14 19 19 C 1.38564 * 119.82794 * 179.97438 * 18 17 15 20 20 C 1.38613 * 119.71575 * 0.28235 * 19 18 17 21 21 C 1.38221 * 120.45721 * 359.47768 * 20 19 18 22 22 C 1.38568 * 134.30425 * 180.02562 * 17 15 14 23 23 C 1.34520 * 124.45793 * 300.00903 * 14 12 11 24 24 O 1.21449 * 125.71588 * 359.97438 * 23 14 12 25 25 C 1.53266 * 108.84154 * 54.53097 * 12 11 10 26 26 O 1.42966 * 109.47219 * 59.98992 * 8 7 6 27 27 C 1.38755 * 119.88733 * 180.25307 * 5 4 2 28 28 C 1.38131 * 119.94294 * 359.42855 * 27 5 4 29 29 C 1.38285 * 120.05116 * 0.59444 * 28 27 5 30 30 C 1.38166 * 120.02618 * 254.97689 * 4 2 1 31 31 H 0.96710 * 113.99767 * 59.99957 * 1 2 3 32 32 H 1.09003 * 109.47320 * 239.99868 * 2 1 3 33 33 H 1.48500 * 109.99554 * 59.99856 * 3 2 1 34 34 H 1.48498 * 109.99916 * 181.31600 * 3 2 1 35 35 H 1.08993 * 109.47647 * 60.00035 * 7 6 5 36 36 H 1.09000 * 109.46780 * 299.99183 * 7 6 5 37 37 H 1.09006 * 109.55787 * 182.18587 * 11 10 8 38 38 H 1.08996 * 109.56213 * 61.86176 * 11 10 8 39 39 H 1.08002 * 120.13758 * 179.97438 * 19 18 17 40 40 H 1.07998 * 119.76643 * 179.69270 * 20 19 18 41 41 H 1.08001 * 119.76837 * 180.26667 * 21 20 19 42 42 H 1.07995 * 120.14179 * 0.02562 * 22 17 15 43 43 H 1.08996 * 109.55949 * 65.31356 * 25 12 11 44 44 H 1.08996 * 109.55911 * 185.63895 * 25 12 11 45 45 H 1.08000 * 120.02961 * 179.69736 * 27 5 4 46 46 H 1.07999 * 119.96995 * 180.29345 * 28 27 5 47 47 H 1.07999 * 119.94262 * 179.69954 * 29 28 27 48 48 H 1.07998 * 119.97087 * 0.04471 * 30 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.8695 -2.0940 1.3069 6 8 1.3557 -2.8107 0.2728 7 6 1.3230 -4.2316 0.4212 8 6 0.7166 -4.8616 -0.8344 9 1 0.6921 -5.9455 -0.7214 10 8 -0.6136 -4.3710 -1.0188 11 6 -1.2602 -4.8830 -2.1880 12 6 -0.4180 -4.5275 -3.4182 13 1 -0.4031 -3.4457 -3.5505 14 7 -0.9948 -5.1596 -4.6073 15 6 -1.4384 -4.4894 -5.6861 16 8 -1.4247 -3.2831 -5.8263 17 6 -1.9462 -5.4668 -6.6718 18 6 -1.7643 -6.7357 -6.0857 19 6 -2.1494 -7.8747 -6.7745 20 6 -2.7059 -7.7579 -8.0386 21 6 -2.8888 -6.5133 -8.6114 22 6 -2.5088 -5.3652 -7.9340 23 6 -1.1508 -6.4865 -4.7641 24 8 -0.8402 -7.3373 -3.9550 25 6 1.0103 -5.0412 -3.2055 26 8 1.5126 -4.5192 -1.9715 27 6 2.3280 -2.7449 2.4434 28 6 2.8554 -2.0147 3.4906 29 6 2.9154 -0.6353 3.4120 30 6 2.4540 0.0158 2.2832 31 1 -0.3933 0.4418 -0.7651 32 1 1.7923 -0.5139 -0.8900 33 1 1.5615 2.4678 1.2085 34 1 3.5346 1.7702 -0.0320 35 1 0.7164 -4.4926 1.2883 36 1 2.3372 -4.6056 0.5612 37 1 -2.2503 -4.4369 -2.2824 38 1 -1.3523 -5.9662 -2.1094 39 1 -2.0120 -8.8495 -6.3303 40 1 -3.0018 -8.6454 -8.5783 41 1 -3.3275 -6.4350 -9.5952 42 1 -2.6502 -4.3957 -8.3883 43 1 1.0041 -6.1304 -3.1654 44 1 1.6440 -4.7082 -4.0274 45 1 2.2765 -3.8217 2.5073 46 1 3.2168 -2.5211 4.3734 47 1 3.3236 -0.0659 4.2338 48 1 2.5019 1.0932 2.2242 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_26800_13594088.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 14:17:57 Heat of formation + Delta-G solvation = -114.172083 kcal Electronic energy + Delta-G solvation = -37600.672577 eV Core-core repulsion = 32554.981281 eV Total energy + Delta-G solvation = -5045.691296 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 398.134 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -43.67421 -41.48951 -40.89847 -39.81511 -39.61111 -38.46193 -37.27849 -37.08101 -36.92712 -34.55918 -32.80719 -32.37025 -31.88173 -30.80392 -29.57543 -27.37991 -26.48373 -26.34573 -25.57242 -24.54333 -23.56177 -22.95650 -22.29259 -22.12282 -21.00603 -19.32315 -19.01734 -18.98118 -18.63504 -18.17560 -17.89772 -17.55297 -17.46411 -17.05580 -16.73874 -16.57350 -16.38534 -16.29897 -16.05476 -16.02818 -15.62084 -15.54099 -15.24630 -15.16337 -15.11111 -14.87320 -14.64040 -14.57277 -14.21897 -13.98647 -13.84010 -13.64682 -13.54021 -13.37583 -12.92806 -12.82445 -12.64257 -12.47273 -12.38017 -12.09514 -11.97290 -11.78904 -11.69845 -11.58303 -11.54941 -10.84710 -10.74791 -10.45636 -10.42234 -10.05403 -9.91204 -9.09019 -4.86537 -1.16758 -0.26417 0.28464 0.50653 0.80670 0.92906 1.42614 1.67708 1.74626 2.06973 2.11737 2.29078 2.35554 2.37653 2.39144 2.73893 3.06629 3.23440 3.32655 3.36235 3.52360 3.60306 3.68699 3.76515 3.81495 3.85745 3.86305 3.95783 4.01921 4.03244 4.10832 4.12551 4.15390 4.16871 4.18733 4.33021 4.35692 4.42643 4.51116 4.53625 4.56819 4.63579 4.69478 4.71828 4.88855 4.98773 5.03442 5.33395 5.34413 5.40509 5.41708 5.52003 5.54711 5.78919 5.84916 5.98023 6.42481 6.44854 6.87476 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.059 4.059 3 Si 0.680 3.320 4 C -0.106 4.106 5 C 0.157 3.843 6 O -0.281 6.281 7 C 0.074 3.926 8 C 0.247 3.753 9 H 0.085 0.915 10 O -0.365 6.365 11 C 0.048 3.952 12 C 0.075 3.925 13 H 0.130 0.870 14 N -0.570 5.570 15 C 0.576 3.424 16 O -0.452 6.452 17 C -0.140 4.140 18 C -0.143 4.143 19 C -0.042 4.042 20 C -0.094 4.094 21 C -0.092 4.092 22 C -0.042 4.042 23 C 0.576 3.424 24 O -0.460 6.460 25 C 0.048 3.952 26 O -0.369 6.369 27 C -0.212 4.212 28 C -0.072 4.072 29 C -0.154 4.154 30 C -0.085 4.085 31 H 0.378 0.622 32 H 0.073 0.927 33 H -0.251 1.251 34 H -0.255 1.255 35 H 0.089 0.911 36 H 0.088 0.912 37 H 0.109 0.891 38 H 0.073 0.927 39 H 0.144 0.856 40 H 0.145 0.855 41 H 0.145 0.855 42 H 0.145 0.855 43 H 0.074 0.926 44 H 0.109 0.891 45 H 0.131 0.869 46 H 0.129 0.871 47 H 0.128 0.872 48 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.733 -3.884 -5.719 7.127 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.170 4.170 3 Si 0.582 3.418 4 C -0.107 4.107 5 C 0.111 3.889 6 O -0.194 6.194 7 C -0.001 4.001 8 C 0.151 3.849 9 H 0.102 0.898 10 O -0.284 6.284 11 C -0.029 4.029 12 C -0.026 4.026 13 H 0.148 0.852 14 N -0.315 5.315 15 C 0.365 3.635 16 O -0.322 6.322 17 C -0.143 4.143 18 C -0.146 4.146 19 C -0.060 4.060 20 C -0.112 4.112 21 C -0.110 4.110 22 C -0.061 4.061 23 C 0.365 3.635 24 O -0.331 6.331 25 C -0.029 4.029 26 O -0.289 6.289 27 C -0.231 4.231 28 C -0.090 4.090 29 C -0.172 4.172 30 C -0.102 4.102 31 H 0.225 0.775 32 H 0.091 0.909 33 H -0.176 1.176 34 H -0.180 1.180 35 H 0.107 0.893 36 H 0.106 0.894 37 H 0.127 0.873 38 H 0.091 0.909 39 H 0.162 0.838 40 H 0.163 0.837 41 H 0.163 0.837 42 H 0.163 0.837 43 H 0.092 0.908 44 H 0.127 0.873 45 H 0.149 0.851 46 H 0.147 0.853 47 H 0.146 0.854 48 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges -0.918 -3.045 -4.304 5.351 hybrid contribution 0.008 -1.097 0.154 1.108 sum -0.910 -4.142 -4.149 5.933 Atomic orbital electron populations 1.86523 1.17105 1.81828 1.49116 1.24484 0.85870 1.09418 0.97189 0.95365 0.80872 0.78582 0.87015 1.18659 1.04845 0.90503 0.96643 1.18752 0.92476 0.90719 0.86953 1.86263 1.77055 1.17825 1.38216 1.22865 1.01412 0.80176 0.95670 1.23599 0.78746 0.96223 0.86299 0.89806 1.88300 1.27131 1.70664 1.42332 1.23016 0.96550 1.00308 0.83075 1.22660 0.95010 1.01169 0.83805 0.85177 1.46459 1.58046 1.08734 1.18301 1.18404 0.76233 0.87430 0.81418 1.90855 1.50499 1.13056 1.77759 1.20477 1.03817 0.93496 0.96550 1.20470 1.03808 0.95165 0.95200 1.20856 0.94022 0.97672 0.93495 1.21553 0.96581 0.98692 0.94342 1.21560 0.97348 0.91684 1.00439 1.20871 0.93629 1.00261 0.91308 1.18460 0.76856 0.81477 0.86681 1.90814 1.46558 1.47971 1.47743 1.23018 0.92746 0.99380 0.87806 1.88257 1.49368 1.76549 1.14681 1.21301 1.06418 1.00487 0.94880 1.21003 0.96326 0.93899 0.97772 1.21000 1.03184 0.94696 0.98357 1.20858 0.97457 0.99120 0.92777 0.77504 0.90898 1.17591 1.17997 0.89310 0.89400 0.87254 0.90879 0.83822 0.83723 0.83696 0.83732 0.90779 0.87297 0.85127 0.85276 0.85415 0.85639 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.93 12.86 -35.23 -0.45 -2.39 16 2 C -0.06 -0.19 2.37 36.01 0.09 -0.10 16 3 Si 0.68 0.71 30.20 -169.99 -5.13 -4.42 16 4 C -0.11 -0.52 5.30 -104.47 -0.55 -1.07 16 5 C 0.16 0.72 6.66 -39.22 -0.26 0.46 16 6 O -0.28 -1.30 9.25 -39.91 -0.37 -1.67 16 7 C 0.07 0.10 4.83 37.16 0.18 0.28 16 8 C 0.25 0.42 3.59 37.16 0.13 0.55 16 9 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 10 O -0.37 -1.14 10.43 -63.56 -0.66 -1.81 16 11 C 0.05 0.07 6.33 37.29 0.24 0.30 16 12 C 0.08 0.10 3.08 -67.66 -0.21 -0.11 16 13 H 0.13 0.26 7.59 -51.93 -0.39 -0.13 16 14 N -0.57 -0.62 2.53 -110.22 -0.28 -0.89 16 15 C 0.58 0.96 8.02 -12.46 -0.10 0.86 16 16 O -0.45 -1.85 17.44 5.41 0.09 -1.76 16 17 C -0.14 0.02 6.41 -104.83 -0.67 -0.65 16 18 C -0.14 0.04 6.40 -104.83 -0.67 -0.63 16 19 C -0.04 0.10 10.09 -39.32 -0.40 -0.30 16 20 C -0.09 0.37 10.04 -39.45 -0.40 -0.03 16 21 C -0.09 0.36 10.03 -39.45 -0.40 -0.04 16 22 C -0.04 0.09 10.09 -39.32 -0.40 -0.30 16 23 C 0.58 0.68 7.35 -12.46 -0.09 0.59 16 24 O -0.46 -1.31 15.16 5.41 0.08 -1.22 16 25 C 0.05 0.06 6.32 37.30 0.24 0.29 16 26 O -0.37 -1.02 10.43 -63.56 -0.66 -1.68 16 27 C -0.21 -0.54 9.04 -39.43 -0.36 -0.90 16 28 C -0.07 -0.14 10.04 -39.60 -0.40 -0.54 16 29 C -0.15 -0.41 10.04 -39.56 -0.40 -0.81 16 30 C -0.08 -0.34 8.66 -39.61 -0.34 -0.69 16 31 H 0.38 -0.50 8.74 45.56 0.40 -0.10 16 32 H 0.07 0.22 7.83 -51.93 -0.41 -0.19 16 33 H -0.25 -0.86 6.75 56.52 0.38 -0.48 16 34 H -0.26 -0.86 7.11 56.52 0.40 -0.46 16 35 H 0.09 -0.01 7.65 -51.93 -0.40 -0.41 16 36 H 0.09 -0.05 7.67 -51.93 -0.40 -0.45 16 37 H 0.11 0.07 8.14 -51.93 -0.42 -0.35 16 38 H 0.07 0.09 6.69 -51.93 -0.35 -0.25 16 39 H 0.14 -0.53 8.06 -52.49 -0.42 -0.95 16 40 H 0.14 -0.91 8.06 -52.49 -0.42 -1.34 16 41 H 0.15 -0.91 8.06 -52.49 -0.42 -1.33 16 42 H 0.14 -0.50 8.06 -52.49 -0.42 -0.93 16 43 H 0.07 0.08 6.65 -51.93 -0.35 -0.26 16 44 H 0.11 0.03 8.14 -51.93 -0.42 -0.39 16 45 H 0.13 0.00 6.30 -52.49 -0.33 -0.33 16 46 H 0.13 -0.07 8.06 -52.49 -0.42 -0.50 16 47 H 0.13 0.07 8.06 -52.49 -0.42 -0.36 16 48 H 0.13 0.42 4.90 -52.49 -0.26 0.16 16 LS Contribution 403.65 15.07 6.08 6.08 Total: 0.00 -10.52 403.65 -11.57 -22.10 By element: Atomic # 1 Polarization: -4.01 SS G_CDS: -5.50 Total: -9.51 kcal Atomic # 6 Polarization: 1.94 SS G_CDS: -4.77 Total: -2.83 kcal Atomic # 7 Polarization: -0.62 SS G_CDS: -0.28 Total: -0.89 kcal Atomic # 8 Polarization: -8.55 SS G_CDS: -1.97 Total: -10.53 kcal Atomic # 14 Polarization: 0.71 SS G_CDS: -5.13 Total: -4.42 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -10.52 -11.57 -22.10 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_26800_13594088.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -92.076 kcal (2) G-P(sol) polarization free energy of solvation -10.525 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -102.601 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.571 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.096 kcal (6) G-S(sol) free energy of system = (1) + (5) -114.172 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.32 seconds