Wall clock time and date at job start Mon Mar 8 2021 15:16:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35991 * 117.00364 * 2 1 4 4 C 1.38519 * 120.06958 * 359.72831 * 3 2 1 5 5 C 1.38296 * 119.99696 * 179.74377 * 4 3 2 6 6 C 1.50701 * 119.92580 * 180.23141 * 5 4 3 7 7 O 1.42903 * 109.47261 * 300.27493 * 6 5 4 8 8 Si 1.86295 * 109.47147 * 180.27619 * 6 5 4 9 9 H 1.48505 * 109.47118 * 59.99881 * 8 6 5 10 10 H 1.48498 * 109.47234 * 180.02562 * 8 6 5 11 11 H 1.48501 * 109.46989 * 300.00353 * 8 6 5 12 12 C 1.38203 * 120.14679 * 0.51103 * 5 4 3 13 13 C 1.38288 * 120.14554 * 359.76377 * 12 5 4 14 14 C 1.38522 * 119.99990 * 359.97438 * 13 12 5 15 15 O 1.35994 * 120.07549 * 179.97438 * 14 13 12 16 16 C 1.42901 * 116.99839 * 0.02908 * 15 14 13 17 17 O 1.42900 * 109.47398 * 74.99368 * 16 15 14 18 18 Si 1.63101 * 113.99757 * 180.02562 * 17 16 15 19 19 C 1.86296 * 109.47260 * 299.99899 * 18 17 16 20 20 C 1.86295 * 109.47074 * 60.00561 * 18 17 16 21 21 C 1.86305 * 109.46825 * 180.02562 * 18 17 16 22 22 C 1.53007 * 109.46830 * 60.00040 * 21 18 17 23 23 C 1.52997 * 109.47021 * 179.97438 * 21 18 17 24 24 C 1.52998 * 109.47191 * 300.00344 * 21 18 17 25 25 H 1.09002 * 109.47382 * 179.97438 * 1 2 3 26 26 H 1.09001 * 109.46938 * 59.99845 * 1 2 3 27 27 H 1.09004 * 109.46926 * 299.99967 * 1 2 3 28 28 H 1.08002 * 120.00791 * 359.97438 * 4 3 2 29 29 H 1.09002 * 109.47150 * 60.27802 * 6 5 4 30 30 H 0.96692 * 114.00195 * 300.00172 * 7 6 5 31 31 H 1.07996 * 119.92818 * 179.74666 * 12 5 4 32 32 H 1.07992 * 120.00165 * 179.97438 * 13 12 5 33 33 H 1.09000 * 109.47348 * 194.99951 * 16 15 14 34 34 H 1.09005 * 109.46860 * 314.99335 * 16 15 14 35 35 H 1.09005 * 109.46627 * 60.00521 * 19 18 17 36 36 H 1.09006 * 109.46895 * 179.97438 * 19 18 17 37 37 H 1.08994 * 109.47357 * 300.00232 * 19 18 17 38 38 H 1.09002 * 109.47621 * 59.99461 * 20 18 17 39 39 H 1.09006 * 109.47535 * 179.97438 * 20 18 17 40 40 H 1.08996 * 109.47148 * 299.99536 * 20 18 17 41 41 H 1.09003 * 109.46685 * 60.00561 * 22 21 18 42 42 H 1.09000 * 109.46640 * 179.97438 * 22 21 18 43 43 H 1.08994 * 109.47435 * 299.99813 * 22 21 18 44 44 H 1.09001 * 109.47096 * 60.00558 * 23 21 18 45 45 H 1.09000 * 109.47134 * 179.97438 * 23 21 18 46 46 H 1.09002 * 109.47271 * 299.99916 * 23 21 18 47 47 H 1.08994 * 109.47331 * 60.00029 * 24 21 18 48 48 H 1.09000 * 109.47268 * 180.02562 * 24 21 18 49 49 H 1.09001 * 109.47244 * 299.99637 * 24 21 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2117 0.0000 4 6 1.2936 2.3743 -0.0057 5 6 1.9230 3.6057 -0.0003 6 6 1.1023 4.8696 -0.0012 7 8 0.2783 4.9017 -1.1683 8 14 2.2371 6.3470 -0.0016 9 1 3.0943 6.3125 -1.2138 10 1 1.4284 7.5925 -0.0019 11 1 3.0935 6.3137 1.2112 12 6 3.3031 3.6798 0.0001 13 6 4.0606 2.5229 0.0000 14 6 3.4364 1.2862 0.0001 15 8 4.1799 0.1475 -0.0005 16 6 5.6007 0.3005 -0.0005 17 8 6.0372 0.6977 1.3009 18 14 7.6502 0.9054 1.4249 19 6 8.5153 -0.6939 1.0194 20 6 8.1994 2.2281 0.2336 21 6 8.0782 1.4186 3.1640 22 6 7.6272 0.3318 4.1420 23 6 9.5913 1.6129 3.2805 24 6 7.3677 2.7318 3.4977 25 1 -0.3634 -1.0277 -0.0005 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3633 0.5139 0.8900 28 1 0.2150 2.3193 -0.0105 29 1 0.4732 4.8950 0.8885 30 1 0.7723 4.8817 -1.9993 31 1 3.7909 4.6433 0.0001 32 1 5.1389 2.5835 -0.0001 33 1 6.0682 -0.6474 -0.2670 34 1 5.8841 1.0621 -0.7270 35 1 8.2648 -0.9945 0.0020 36 1 9.5933 -0.5549 1.1018 37 1 8.1939 -1.4677 1.7164 38 1 7.6932 3.1639 0.4708 39 1 9.2773 2.3673 0.3167 40 1 7.9490 1.9275 -0.7838 41 1 8.1335 -0.6037 3.9043 42 1 7.8780 0.6319 5.1594 43 1 6.5493 0.1930 4.0591 44 1 9.9130 2.3869 2.5838 45 1 9.8418 1.9136 4.2979 46 1 10.0972 0.6770 3.0430 47 1 6.2898 2.5930 3.4148 48 1 7.6185 3.0323 4.5150 49 1 7.6890 3.5061 2.8010 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_26802_14468166.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 15:16:33 Heat of formation + Delta-G solvation = -179.358884 kcal Electronic energy + Delta-G solvation = -27425.356643 eV Core-core repulsion = 23669.693714 eV Total energy + Delta-G solvation = -3755.662930 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 328.171 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -41.65622 -39.79548 -38.86420 -37.30337 -36.90763 -36.60666 -31.80758 -31.30238 -29.61555 -29.20691 -28.49778 -27.93526 -27.46945 -27.28275 -25.87707 -23.25904 -22.40578 -20.53125 -19.70543 -18.62238 -18.39962 -18.14799 -17.46162 -16.70769 -16.41195 -16.16672 -16.08957 -15.93129 -15.87454 -15.12478 -14.96435 -14.90048 -14.79314 -14.62235 -14.34828 -14.06429 -13.87887 -13.61821 -13.57505 -13.48181 -13.37116 -13.00949 -12.99403 -12.77285 -12.62999 -12.55973 -12.46150 -12.22703 -12.06671 -12.00862 -11.96055 -11.85534 -11.65839 -11.63963 -11.47398 -10.54949 -10.44032 -10.17325 -9.67848 -8.81355 0.26383 0.37324 1.14843 1.19810 1.43054 1.51224 1.56726 1.88512 1.90669 2.09031 2.35185 2.45089 2.67547 3.44495 3.64201 3.67911 3.80907 3.99645 3.99684 4.05242 4.06116 4.17229 4.30930 4.34700 4.39629 4.42314 4.52268 4.54902 4.58392 4.59289 4.61682 4.65462 4.69017 4.74563 4.80146 4.94360 4.98158 5.04757 5.05325 5.07620 5.16440 5.22684 5.27244 5.34245 5.41591 5.43834 5.44036 5.50085 5.64650 6.04792 6.53860 6.59204 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.306 6.306 3 C 0.104 3.896 4 C -0.146 4.146 5 C -0.116 4.116 6 C -0.077 4.077 7 O -0.539 6.539 8 Si 0.949 3.051 9 H -0.251 1.251 10 H -0.254 1.254 11 H -0.249 1.249 12 C -0.125 4.125 13 C -0.155 4.155 14 C 0.108 3.892 15 O -0.286 6.286 16 C 0.247 3.753 17 O -0.645 6.645 18 Si 1.290 2.710 19 C -0.513 4.513 20 C -0.515 4.515 21 C -0.372 4.372 22 C -0.135 4.135 23 C -0.137 4.137 24 C -0.135 4.135 25 H 0.102 0.898 26 H 0.057 0.943 27 H 0.056 0.944 28 H 0.142 0.858 29 H 0.118 0.882 30 H 0.377 0.623 31 H 0.124 0.876 32 H 0.138 0.862 33 H 0.110 0.890 34 H 0.062 0.938 35 H 0.067 0.933 36 H 0.077 0.923 37 H 0.076 0.924 38 H 0.074 0.926 39 H 0.079 0.921 40 H 0.067 0.933 41 H 0.055 0.945 42 H 0.054 0.946 43 H 0.060 0.940 44 H 0.056 0.944 45 H 0.057 0.943 46 H 0.056 0.944 47 H 0.060 0.940 48 H 0.054 0.946 49 H 0.054 0.946 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.579 0.595 -1.305 2.133 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.219 6.219 3 C 0.058 3.942 4 C -0.165 4.165 5 C -0.116 4.116 6 C -0.188 4.188 7 O -0.344 6.344 8 Si 0.772 3.228 9 H -0.174 1.174 10 H -0.178 1.178 11 H -0.173 1.173 12 C -0.143 4.143 13 C -0.173 4.173 14 C 0.063 3.937 15 O -0.200 6.200 16 C 0.134 3.866 17 O -0.605 6.605 18 Si 1.422 2.578 19 C -0.615 4.615 20 C -0.617 4.617 21 C -0.416 4.416 22 C -0.192 4.192 23 C -0.194 4.194 24 C -0.192 4.192 25 H 0.120 0.880 26 H 0.075 0.925 27 H 0.075 0.925 28 H 0.159 0.841 29 H 0.136 0.864 30 H 0.224 0.776 31 H 0.142 0.858 32 H 0.156 0.844 33 H 0.127 0.873 34 H 0.080 0.920 35 H 0.086 0.914 36 H 0.096 0.904 37 H 0.095 0.905 38 H 0.093 0.907 39 H 0.098 0.902 40 H 0.087 0.913 41 H 0.074 0.926 42 H 0.073 0.927 43 H 0.079 0.921 44 H 0.075 0.925 45 H 0.076 0.924 46 H 0.076 0.924 47 H 0.079 0.921 48 H 0.073 0.927 49 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges 1.418 0.945 -0.716 1.849 hybrid contribution 0.673 -0.154 -0.355 0.777 sum 2.091 0.791 -1.072 2.479 Atomic orbital electron populations 1.23118 0.78149 1.04264 1.01457 1.86191 1.21330 1.25574 1.88798 1.18286 0.89063 0.85450 1.01402 1.20900 1.00372 0.90340 1.04886 1.19984 0.93492 0.95319 1.02853 1.24937 1.00393 1.01558 0.91899 1.86504 1.35647 1.96928 1.15338 0.85696 0.78028 0.77222 0.81875 1.17443 1.17831 1.17317 1.20720 0.93059 0.98078 1.02436 1.20990 1.00486 0.90697 1.05170 1.18213 0.88141 0.86121 1.01216 1.86364 1.17733 1.28444 1.87484 1.23433 0.79663 1.00473 0.82997 1.85335 1.53131 1.86185 1.35862 0.76602 0.50177 0.65190 0.65810 1.27031 1.09653 1.19417 1.05382 1.27070 1.07315 1.15056 1.12275 1.25746 0.99041 1.00049 1.16749 1.21520 1.01428 0.97356 0.98908 1.21562 0.93897 1.01536 1.02428 1.21523 1.00364 0.95607 1.01732 0.87989 0.92469 0.92537 0.84082 0.86409 0.77627 0.85823 0.84400 0.87283 0.92043 0.91376 0.90375 0.90519 0.90673 0.90173 0.91349 0.92637 0.92685 0.92074 0.92496 0.92374 0.92448 0.92103 0.92655 0.92703 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 9.81 101.05 0.99 0.98 16 2 O -0.31 -1.11 10.28 -34.19 -0.35 -1.47 16 3 C 0.10 0.35 6.70 -39.12 -0.26 0.09 16 4 C -0.15 -0.25 8.59 -39.46 -0.34 -0.59 16 5 C -0.12 -0.12 5.39 -104.61 -0.56 -0.69 16 6 C -0.08 0.02 2.82 36.01 0.10 0.12 16 7 O -0.54 -0.10 12.76 -35.23 -0.45 -0.55 16 8 Si 0.95 -0.46 25.06 -169.99 -4.26 -4.72 16 9 H -0.25 0.11 7.11 56.52 0.40 0.52 16 10 H -0.25 -0.23 7.11 56.52 0.40 0.17 16 11 H -0.25 -0.02 7.11 56.52 0.40 0.39 16 12 C -0.12 -0.13 8.66 -39.58 -0.34 -0.48 16 13 C -0.15 -0.26 8.78 -39.46 -0.35 -0.60 16 14 C 0.11 0.37 6.64 -39.12 -0.26 0.11 16 15 O -0.29 -1.01 10.18 -49.27 -0.50 -1.51 16 16 C 0.25 0.01 5.42 101.05 0.55 0.56 16 17 O -0.64 -0.35 8.04 -59.04 -0.47 -0.83 16 18 Si 1.29 -2.11 8.45 -169.99 -1.44 -3.55 16 19 C -0.51 0.76 8.50 101.05 0.86 1.62 16 20 C -0.52 1.00 8.50 101.05 0.86 1.86 16 21 C -0.37 0.23 0.53 -90.62 -0.05 0.18 16 22 C -0.13 -0.01 7.85 37.16 0.29 0.28 16 23 C -0.14 0.15 7.85 37.16 0.29 0.44 16 24 C -0.14 0.02 7.85 37.16 0.29 0.31 16 25 H 0.10 -0.18 8.14 -51.93 -0.42 -0.61 16 26 H 0.06 -0.07 7.65 -51.93 -0.40 -0.47 16 27 H 0.06 -0.06 7.68 -51.93 -0.40 -0.46 16 28 H 0.14 0.06 6.30 -52.49 -0.33 -0.28 16 29 H 0.12 -0.12 7.96 -51.93 -0.41 -0.54 16 30 H 0.38 -1.10 8.70 45.56 0.40 -0.70 16 31 H 0.12 -0.06 4.86 -52.49 -0.26 -0.32 16 32 H 0.14 -0.03 5.85 -52.49 -0.31 -0.34 16 33 H 0.11 -0.26 7.21 -51.93 -0.37 -0.63 16 34 H 0.06 -0.14 5.77 -51.93 -0.30 -0.44 16 35 H 0.07 -0.15 7.48 -51.93 -0.39 -0.53 16 36 H 0.08 -0.14 7.79 -51.93 -0.40 -0.55 16 37 H 0.08 -0.07 7.79 -51.93 -0.40 -0.48 16 38 H 0.07 -0.14 7.79 -51.93 -0.40 -0.54 16 39 H 0.08 -0.17 7.79 -51.93 -0.40 -0.58 16 40 H 0.07 -0.17 7.48 -51.93 -0.39 -0.56 16 41 H 0.05 -0.03 7.79 -51.93 -0.40 -0.44 16 42 H 0.05 0.02 8.14 -51.93 -0.42 -0.41 16 43 H 0.06 0.05 7.96 -51.93 -0.41 -0.37 16 44 H 0.06 -0.11 7.79 -51.93 -0.40 -0.51 16 45 H 0.06 -0.03 8.14 -51.93 -0.42 -0.46 16 46 H 0.06 -0.10 7.79 -51.93 -0.40 -0.50 16 47 H 0.06 0.03 7.96 -51.93 -0.41 -0.38 16 48 H 0.05 0.01 8.14 -51.93 -0.42 -0.41 16 49 H 0.05 -0.05 7.80 -51.93 -0.40 -0.46 16 LS Contribution 387.78 15.07 5.84 5.84 Total: 0.00 -6.19 387.78 -7.27 -13.46 By element: Atomic # 1 Polarization: -3.18 SS G_CDS: -7.71 Total: -10.89 kcal Atomic # 6 Polarization: 2.13 SS G_CDS: 2.07 Total: 4.20 kcal Atomic # 8 Polarization: -2.57 SS G_CDS: -1.78 Total: -4.35 kcal Atomic # 14 Polarization: -2.57 SS G_CDS: -5.70 Total: -8.27 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -6.19 -7.27 -13.46 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_26802_14468166.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -165.897 kcal (2) G-P(sol) polarization free energy of solvation -6.194 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -172.091 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.268 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.462 kcal (6) G-S(sol) free energy of system = (1) + (5) -179.359 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds