Wall clock time and date at job start Mon Mar 8 2021 13:39:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35996 * 116.99588 * 2 1 4 4 C 1.39152 * 120.06963 * 179.97438 * 3 2 1 5 5 O 1.35996 * 120.07708 * 0.02562 * 4 3 2 6 6 C 1.42901 * 117.00707 * 180.02562 * 5 4 3 7 7 C 1.53001 * 109.47117 * 180.02562 * 6 5 4 8 8 H 1.08999 * 112.85176 * 45.33687 * 7 6 5 9 9 C 1.53779 * 113.61077 * 176.52630 * 7 6 5 10 10 C 1.53783 * 87.08110 * 89.11479 * 9 7 6 11 11 O 1.42900 * 113.61580 * 270.88198 * 10 9 7 12 12 C 1.42899 * 114.00191 * 294.70258 * 11 10 9 13 13 C 1.53005 * 113.61353 * 140.06344 * 10 9 7 14 14 F 1.39899 * 109.46785 * 54.78163 * 13 10 9 15 15 F 1.39902 * 109.46690 * 174.78020 * 13 10 9 16 16 F 1.39900 * 109.46992 * 294.77972 * 13 10 9 17 17 C 1.53775 * 113.61196 * 274.13314 * 7 6 5 18 18 C 1.38569 * 119.85745 * 180.02562 * 4 3 2 19 19 C 1.38242 * 119.99410 * 359.72746 * 18 4 3 20 20 C 1.38250 * 120.14557 * 0.54331 * 19 18 4 21 21 C 1.50704 * 119.92442 * 179.72640 * 20 19 18 22 22 O 1.42901 * 109.47002 * 244.73133 * 21 20 19 23 23 Si 1.86302 * 109.47248 * 4.73049 * 21 20 19 24 24 C 1.38238 * 120.14686 * 359.45915 * 20 19 18 25 25 H 1.09000 * 109.47057 * 180.02562 * 1 2 3 26 26 H 1.09003 * 109.46894 * 299.99697 * 1 2 3 27 27 H 1.08995 * 109.47075 * 59.99683 * 1 2 3 28 28 H 1.09004 * 109.46900 * 300.00024 * 6 5 4 29 29 H 1.08997 * 109.46867 * 59.99852 * 6 5 4 30 30 H 1.09001 * 113.61568 * 203.66365 * 9 7 6 31 31 H 1.09003 * 113.61666 * 334.48467 * 9 7 6 32 32 H 1.08996 * 109.47030 * 56.86373 * 12 11 10 33 33 H 1.08991 * 109.47344 * 176.86183 * 12 11 10 34 34 H 1.09000 * 109.47094 * 296.86203 * 12 11 10 35 35 H 1.08998 * 113.61906 * 25.43676 * 17 7 6 36 36 H 1.09005 * 113.61385 * 156.34324 * 17 7 6 37 37 H 1.08000 * 120.00482 * 179.97438 * 18 4 3 38 38 H 1.07998 * 119.92785 * 180.27461 * 19 18 4 39 39 H 1.08996 * 109.46952 * 124.73043 * 21 20 19 40 40 H 0.96701 * 114.00303 * 59.99904 * 22 21 20 41 41 H 1.48495 * 109.99713 * 180.02562 * 23 21 20 42 42 H 1.48499 * 109.99682 * 301.32042 * 23 21 20 43 43 H 1.08008 * 120.00080 * 180.24861 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2118 0.0000 4 6 3.4359 1.2864 0.0005 5 8 4.1796 0.1478 0.0005 6 6 5.6004 0.3007 0.0017 7 6 6.2618 -1.0789 0.0009 8 1 5.8086 -1.7652 -0.7145 9 6 7.7964 -1.0262 -0.0834 10 6 7.8002 -0.9664 1.4533 11 8 7.7338 0.3625 1.9746 12 6 8.8786 1.1630 1.6734 13 6 8.9088 -1.8022 2.0964 14 9 10.1466 -1.4206 1.5678 15 9 8.9077 -1.5927 3.4796 16 9 8.6854 -3.1572 1.8297 17 6 6.4355 -1.6795 1.4058 18 6 4.0603 2.5234 0.0011 19 6 3.3029 3.6799 -0.0046 20 6 1.9224 3.6057 0.0005 21 6 1.1016 4.8696 0.0005 22 8 0.3642 4.9587 1.2213 23 14 2.2309 6.3435 -0.1519 24 6 1.2932 2.3748 0.0000 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 0.5139 -0.8899 28 1 5.9072 0.8510 -0.8878 29 1 5.9059 0.8501 0.8921 30 1 8.2431 -1.9353 -0.4861 31 1 8.1768 -0.1216 -0.5578 32 1 9.0214 1.2009 0.5935 33 1 8.7268 2.1724 2.0554 34 1 9.7607 0.7262 2.1415 35 1 5.7181 -1.3015 2.1341 36 1 6.5109 -2.7670 1.4095 37 1 5.1386 2.5841 0.0019 38 1 3.7907 4.6434 -0.0087 39 1 0.4097 4.8535 -0.8416 40 1 0.9172 4.9776 2.0144 41 1 1.4336 7.5963 -0.1524 42 1 3.2000 6.3592 0.9733 43 1 0.2146 2.3196 -0.0001 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_26802_17321600.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 13:39:59 Heat of formation + Delta-G solvation = -231.261777 kcal Electronic energy + Delta-G solvation = -32181.970568 eV Core-core repulsion = 27167.675615 eV Total energy + Delta-G solvation = -5014.294953 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.127 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -51.16967 -48.71693 -48.60387 -41.89020 -41.30182 -39.35241 -38.90145 -37.31498 -36.83516 -32.03749 -31.43249 -30.38746 -28.53224 -28.32996 -27.41242 -26.91346 -26.08498 -23.90805 -22.93674 -22.41136 -20.66690 -19.89387 -19.50514 -19.40303 -19.22856 -18.43700 -18.07479 -17.40144 -17.24089 -17.05518 -16.58785 -16.38381 -16.14527 -16.04877 -15.79540 -15.76103 -15.58497 -15.49634 -15.45029 -15.08999 -14.88675 -14.79351 -14.70978 -14.42222 -14.23930 -14.01417 -13.79079 -13.47912 -13.36999 -13.23988 -12.86217 -12.69036 -12.58664 -12.42667 -12.13686 -12.04087 -11.98100 -11.83778 -11.74622 -11.56722 -10.88709 -10.60991 -9.74172 -8.81186 -4.97574 0.22900 0.33381 1.27056 1.54752 1.58042 1.94526 1.95638 2.02590 2.31157 2.53280 2.60729 2.62027 2.84890 3.24964 3.33838 3.36214 3.44917 3.58235 3.67108 3.84206 3.91377 4.02611 4.11512 4.12063 4.17348 4.23785 4.26225 4.26518 4.33155 4.35516 4.39021 4.48359 4.54354 4.56604 4.60995 4.61736 4.66921 4.73747 4.91506 5.04454 5.17314 5.40587 5.58911 5.60848 6.07527 6.39140 6.58732 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.305 6.305 3 C 0.101 3.899 4 C 0.111 3.889 5 O -0.300 6.300 6 C 0.068 3.932 7 C -0.097 4.097 8 H 0.107 0.893 9 C -0.142 4.142 10 C 0.038 3.962 11 O -0.332 6.332 12 C 0.009 3.991 13 C 0.437 3.563 14 F -0.182 7.182 15 F -0.174 7.174 16 F -0.174 7.174 17 C -0.111 4.111 18 C -0.168 4.168 19 C -0.114 4.114 20 C -0.116 4.116 21 C -0.072 4.072 22 O -0.530 6.530 23 Si 0.686 3.314 24 C -0.146 4.146 25 H 0.102 0.898 26 H 0.056 0.944 27 H 0.056 0.944 28 H 0.067 0.933 29 H 0.083 0.917 30 H 0.113 0.887 31 H 0.095 0.905 32 H 0.056 0.944 33 H 0.102 0.898 34 H 0.053 0.947 35 H 0.099 0.901 36 H 0.116 0.884 37 H 0.138 0.862 38 H 0.131 0.869 39 H 0.117 0.883 40 H 0.376 0.624 41 H -0.258 1.258 42 H -0.260 1.260 43 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.076 1.235 -3.685 4.032 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.218 6.218 3 C 0.055 3.945 4 C 0.066 3.934 5 O -0.213 6.213 6 C -0.007 4.007 7 C -0.116 4.116 8 H 0.125 0.875 9 C -0.180 4.180 10 C -0.004 4.004 11 O -0.250 6.250 12 C -0.087 4.087 13 C 0.382 3.618 14 F -0.163 7.163 15 F -0.155 7.155 16 F -0.156 7.156 17 C -0.148 4.148 18 C -0.187 4.187 19 C -0.132 4.132 20 C -0.117 4.117 21 C -0.182 4.182 22 O -0.337 6.337 23 Si 0.588 3.412 24 C -0.165 4.165 25 H 0.120 0.880 26 H 0.074 0.926 27 H 0.074 0.926 28 H 0.085 0.915 29 H 0.101 0.899 30 H 0.131 0.869 31 H 0.113 0.887 32 H 0.074 0.926 33 H 0.120 0.880 34 H 0.072 0.928 35 H 0.118 0.882 36 H 0.135 0.865 37 H 0.156 0.844 38 H 0.148 0.852 39 H 0.135 0.865 40 H 0.224 0.776 41 H -0.183 1.183 42 H -0.185 1.185 43 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 0.754 1.634 -3.599 4.023 hybrid contribution 0.299 -0.266 1.221 1.285 sum 1.053 1.368 -2.378 2.938 Atomic orbital electron populations 1.23112 0.78200 1.04273 1.01403 1.86192 1.21269 1.25561 1.88806 1.18282 0.89130 0.85405 1.01688 1.18221 0.88141 0.86055 1.01029 1.86134 1.18269 1.28249 1.88672 1.22758 0.78406 0.96895 1.02673 1.22052 0.94353 0.96801 0.98353 0.87519 1.23589 0.96517 1.05507 0.92370 1.24123 0.95381 0.85693 0.95218 1.88089 1.41292 1.19415 1.76207 1.23148 0.88322 0.96038 1.01146 1.21177 0.83429 0.79632 0.77533 1.93190 1.46110 1.90789 1.86247 1.93222 1.96583 1.94604 1.31139 1.93182 1.94458 1.34289 1.93659 1.23304 0.92155 1.01017 0.98319 1.21011 1.00529 0.90745 1.06392 1.20738 0.92889 0.98044 1.01499 1.19942 0.93656 0.95061 1.03007 1.24989 1.01608 1.01753 0.89806 1.86594 1.36200 1.95494 1.15389 0.94959 0.79620 0.76453 0.90191 1.20919 1.00275 0.90508 1.04803 0.87960 0.92572 0.92551 0.91504 0.89857 0.86913 0.88691 0.92578 0.87983 0.92787 0.88238 0.86543 0.84383 0.85158 0.86494 0.77607 1.18266 1.18481 0.84368 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 9.81 101.05 0.99 0.98 16 2 O -0.30 -0.94 10.28 -34.23 -0.35 -1.29 16 3 C 0.10 0.27 6.70 -39.12 -0.26 0.01 16 4 C 0.11 0.26 6.70 -39.12 -0.26 -0.01 16 5 O -0.30 -0.68 9.92 -34.23 -0.34 -1.02 16 6 C 0.07 -0.06 4.34 37.16 0.16 0.11 16 7 C -0.10 0.17 4.19 -89.81 -0.38 -0.21 16 8 H 0.11 -0.21 8.14 -51.93 -0.42 -0.63 16 9 C -0.14 0.38 6.51 -25.92 -0.17 0.21 16 10 C 0.04 -0.03 0.85 -89.66 -0.08 -0.10 16 11 O -0.33 0.04 8.33 -35.23 -0.29 -0.25 16 12 C 0.01 -0.02 10.33 101.05 1.04 1.03 16 13 C 0.44 0.43 2.51 37.16 0.09 0.53 16 14 F -0.18 -0.21 15.37 2.25 0.03 -0.18 16 15 F -0.17 -0.49 17.09 2.25 0.04 -0.45 16 16 F -0.17 -0.20 15.83 2.25 0.04 -0.17 16 17 C -0.11 0.11 6.92 -25.78 -0.18 -0.07 16 18 C -0.17 -0.05 9.04 -39.46 -0.36 -0.41 16 19 C -0.11 0.02 8.66 -39.58 -0.34 -0.32 16 20 C -0.12 -0.05 5.35 -104.62 -0.56 -0.61 16 21 C -0.07 0.02 2.80 36.01 0.10 0.12 16 22 O -0.53 -0.64 12.83 -35.23 -0.45 -1.09 16 23 Si 0.69 -0.75 29.87 -169.99 -5.08 -5.83 16 24 C -0.15 -0.19 8.67 -39.46 -0.34 -0.54 16 25 H 0.10 -0.21 8.14 -51.93 -0.42 -0.63 16 26 H 0.06 -0.06 7.66 -51.93 -0.40 -0.46 16 27 H 0.06 -0.09 7.66 -51.93 -0.40 -0.49 16 28 H 0.07 -0.15 7.66 -51.93 -0.40 -0.55 16 29 H 0.08 -0.06 5.61 -51.93 -0.29 -0.35 16 30 H 0.11 -0.38 8.06 -51.93 -0.42 -0.80 16 31 H 0.09 -0.36 6.65 -51.93 -0.35 -0.70 16 32 H 0.06 -0.20 6.60 -51.93 -0.34 -0.54 16 33 H 0.10 -0.35 8.14 -51.93 -0.42 -0.77 16 34 H 0.05 -0.07 6.60 -51.93 -0.34 -0.41 16 35 H 0.10 -0.01 8.10 -51.93 -0.42 -0.43 16 36 H 0.12 -0.21 7.02 -51.93 -0.36 -0.58 16 37 H 0.14 -0.26 6.30 -52.49 -0.33 -0.59 16 38 H 0.13 -0.26 4.83 -52.49 -0.25 -0.52 16 39 H 0.12 -0.12 7.96 -51.93 -0.41 -0.53 16 40 H 0.38 -0.55 8.70 45.56 0.40 -0.15 16 41 H -0.26 -0.57 7.11 56.52 0.40 -0.17 16 42 H -0.26 -0.19 7.01 56.52 0.40 0.21 16 43 H 0.14 0.04 6.30 -52.48 -0.33 -0.29 16 LS Contribution 357.18 15.07 5.38 5.38 Total: 0.00 -6.89 357.18 -6.68 -13.57 By element: Atomic # 1 Polarization: -4.25 SS G_CDS: -5.12 Total: -9.37 kcal Atomic # 6 Polarization: 1.24 SS G_CDS: -0.53 Total: 0.71 kcal Atomic # 8 Polarization: -2.22 SS G_CDS: -1.44 Total: -3.66 kcal Atomic # 9 Polarization: -0.91 SS G_CDS: 0.11 Total: -0.80 kcal Atomic # 14 Polarization: -0.75 SS G_CDS: -5.08 Total: -5.83 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -6.89 -6.68 -13.57 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_26802_17321600.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -217.690 kcal (2) G-P(sol) polarization free energy of solvation -6.892 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -224.583 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.679 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.571 kcal (6) G-S(sol) free energy of system = (1) + (5) -231.262 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds