Wall clock time and date at job start Mon Mar 8 2021 16:23:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35993 * 117.00126 * 2 1 4 4 C 1.38524 * 120.07400 * 359.97438 * 3 2 1 5 5 C 1.38280 * 120.00256 * 180.02562 * 4 3 2 6 6 C 1.50700 * 119.92765 * 180.02562 * 5 4 3 7 7 O 1.42895 * 109.47148 * 299.99357 * 6 5 4 8 8 Si 1.86305 * 109.47099 * 179.97438 * 6 5 4 9 9 H 1.48498 * 109.47257 * 179.97438 * 8 6 5 10 10 H 1.48505 * 109.47095 * 299.99737 * 8 6 5 11 11 H 1.48497 * 109.47210 * 59.99797 * 8 6 5 12 12 C 1.38214 * 120.14744 * 359.97438 * 5 4 3 13 13 C 1.38284 * 120.14441 * 359.77092 * 12 5 4 14 14 C 1.38530 * 120.00071 * 0.50612 * 13 12 5 15 15 O 1.35983 * 120.07711 * 179.74253 * 14 13 12 16 16 C 1.42906 * 117.00105 * 359.72808 * 15 14 13 17 17 C 1.50693 * 109.47463 * 180.02562 * 16 15 14 18 18 C 1.38233 * 120.00207 * 89.99418 * 17 16 15 19 19 C 1.38234 * 120.00037 * 179.72405 * 18 17 16 20 20 C 1.38234 * 120.00240 * 0.26327 * 19 18 17 21 21 Si 1.86795 * 120.00205 * 180.02562 * 20 19 18 22 22 C 1.86297 * 109.47192 * 89.99958 * 21 20 19 23 23 C 1.86301 * 109.47283 * 209.99980 * 21 20 19 24 24 C 1.86301 * 109.47118 * 329.99845 * 21 20 19 25 25 C 1.38238 * 119.99693 * 359.97438 * 20 19 18 26 26 C 1.38234 * 120.00067 * 0.02562 * 25 20 19 27 27 H 1.08998 * 109.47210 * 179.97438 * 1 2 3 28 28 H 1.09003 * 109.47107 * 299.99926 * 1 2 3 29 29 H 1.08995 * 109.46930 * 59.99708 * 1 2 3 30 30 H 1.08006 * 119.99637 * 359.97438 * 4 3 2 31 31 H 1.08998 * 109.47206 * 59.99789 * 6 5 4 32 32 H 0.96700 * 114.00257 * 180.02562 * 7 6 5 33 33 H 1.08000 * 119.92854 * 180.02562 * 12 5 4 34 34 H 1.08004 * 120.00496 * 180.27305 * 13 12 5 35 35 H 1.09000 * 109.46902 * 59.99959 * 16 15 14 36 36 H 1.09001 * 109.46622 * 299.99855 * 16 15 14 37 37 H 1.08002 * 120.00157 * 0.02562 * 18 17 16 38 38 H 1.07999 * 120.00009 * 180.28389 * 19 18 17 39 39 H 1.08999 * 109.47282 * 60.00138 * 22 21 20 40 40 H 1.08997 * 109.47709 * 179.97438 * 22 21 20 41 41 H 1.09001 * 109.47505 * 300.00288 * 22 21 20 42 42 H 1.08998 * 109.47270 * 60.00089 * 23 21 20 43 43 H 1.08997 * 109.47416 * 180.02562 * 23 21 20 44 44 H 1.09006 * 109.46995 * 300.00168 * 23 21 20 45 45 H 1.09002 * 109.46976 * 60.00696 * 24 21 20 46 46 H 1.09005 * 109.47230 * 179.97438 * 24 21 20 47 47 H 1.08998 * 109.47233 * 299.99787 * 24 21 20 48 48 H 1.08001 * 119.99624 * 180.02562 * 25 20 19 49 49 H 1.07999 * 120.00008 * 180.02562 * 26 25 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 1.2935 2.3744 -0.0005 5 6 1.9228 3.6057 -0.0011 6 6 1.1021 4.8696 -0.0011 7 8 0.2774 4.9020 -1.1676 8 14 2.2370 6.3471 -0.0011 9 1 1.4282 7.5925 -0.0017 10 1 3.0936 6.3132 1.2115 11 1 3.0937 6.3132 -1.2135 12 6 3.3030 3.6799 -0.0005 13 6 4.0605 2.5230 0.0053 14 6 3.4364 1.2863 0.0001 15 8 4.1799 0.1477 0.0005 16 6 5.6008 0.3006 0.0005 17 6 6.2523 -1.0581 0.0004 18 6 6.5510 -1.6814 -1.1967 19 6 7.1539 -2.9253 -1.1968 20 6 7.4531 -3.5485 0.0003 21 14 8.2684 -5.2291 0.0002 22 6 10.1198 -5.0212 0.0042 23 6 7.7462 -6.1728 1.5192 24 6 7.7524 -6.1696 -1.5230 25 6 7.1499 -2.9274 1.1975 26 6 6.5470 -1.6835 1.1975 27 1 -0.3633 -1.0276 -0.0005 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 0.5139 -0.8899 30 1 0.2148 2.3193 -0.0014 31 1 0.4735 4.8947 0.8891 32 1 -0.2794 5.6898 -1.2339 33 1 3.7908 4.6434 -0.0005 34 1 5.1389 2.5836 0.0102 35 1 5.9069 0.8508 0.8903 36 1 5.9070 0.8501 -0.8897 37 1 6.3179 -1.1943 -2.1321 38 1 7.3915 -3.4102 -2.1321 39 1 10.4217 -4.4710 0.8954 40 1 10.5956 -6.0019 0.0046 41 1 10.4254 -4.4691 -0.8845 42 1 6.6630 -6.2945 1.5169 43 1 8.2223 -7.1533 1.5194 44 1 8.0481 -5.6226 2.4105 45 1 8.0581 -5.6175 -2.4118 46 1 8.2286 -7.1501 -1.5233 47 1 6.6693 -6.2913 -1.5254 48 1 7.3841 -3.4141 2.1327 49 1 6.3105 -1.1981 2.1329 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_26802_9276060.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 16:23:56 Heat of formation + Delta-G solvation = -97.290169 kcal Electronic energy + Delta-G solvation = -27162.498557 eV Core-core repulsion = 23371.709643 eV Total energy + Delta-G solvation = -3790.788914 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 346.156 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -41.59647 -40.21784 -39.09657 -38.69185 -37.01167 -33.18049 -31.83435 -31.63765 -31.22271 -29.56024 -28.49399 -28.42216 -28.39866 -27.35447 -25.99445 -23.46100 -23.43170 -22.39168 -21.74538 -19.48818 -18.58690 -18.13577 -17.92555 -17.16941 -17.09352 -16.40976 -16.26645 -16.01287 -15.88817 -15.67035 -15.34848 -14.99627 -14.65973 -14.31928 -14.22460 -14.12938 -14.08966 -13.95625 -13.84225 -13.60613 -13.44930 -13.38248 -13.23986 -13.23616 -13.08418 -12.85142 -12.65711 -12.37980 -12.19242 -12.14968 -11.99290 -11.86306 -11.74004 -11.64364 -11.01958 -10.88554 -10.79683 -10.37885 -9.72837 -9.65802 -9.63893 -8.72929 0.22454 0.29811 0.39285 0.59966 1.12571 1.41617 1.48448 1.73002 1.86974 1.88762 1.91891 2.33720 2.38018 2.56659 2.64702 3.08671 3.37523 3.70243 3.77360 3.85148 3.94318 3.98713 4.14195 4.19552 4.27595 4.28088 4.31832 4.32481 4.44636 4.50754 4.55600 4.66029 4.70389 4.70425 4.71932 4.73594 4.76902 4.77720 4.78116 4.80340 5.05520 5.08742 5.20349 5.21188 5.43462 5.48057 5.49652 5.52728 5.55105 5.66219 5.66452 5.68063 6.13721 6.16793 6.55031 6.65958 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.304 6.304 3 C 0.101 3.899 4 C -0.142 4.142 5 C -0.074 4.074 6 C -0.079 4.079 7 O -0.545 6.545 8 Si 0.947 3.053 9 H -0.257 1.257 10 H -0.249 1.249 11 H -0.247 1.247 12 C -0.120 4.120 13 C -0.169 4.169 14 C 0.108 3.892 15 O -0.295 6.295 16 C 0.098 3.902 17 C -0.086 4.086 18 C -0.106 4.106 19 C -0.092 4.092 20 C -0.362 4.362 21 Si 1.060 2.940 22 C -0.449 4.449 23 C -0.450 4.450 24 C -0.450 4.450 25 C -0.092 4.092 26 C -0.106 4.106 27 H 0.101 0.899 28 H 0.055 0.945 29 H 0.057 0.943 30 H 0.140 0.860 31 H 0.076 0.924 32 H 0.380 0.620 33 H 0.125 0.875 34 H 0.139 0.861 35 H 0.071 0.929 36 H 0.071 0.929 37 H 0.121 0.879 38 H 0.123 0.877 39 H 0.069 0.931 40 H 0.071 0.929 41 H 0.069 0.931 42 H 0.071 0.929 43 H 0.071 0.929 44 H 0.069 0.931 45 H 0.069 0.931 46 H 0.071 0.929 47 H 0.071 0.929 48 H 0.123 0.877 49 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.034 0.987 1.106 1.482 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.218 6.218 3 C 0.055 3.945 4 C -0.161 4.161 5 C -0.074 4.074 6 C -0.189 4.189 7 O -0.351 6.351 8 Si 0.770 3.230 9 H -0.181 1.181 10 H -0.173 1.173 11 H -0.170 1.170 12 C -0.138 4.138 13 C -0.187 4.187 14 C 0.062 3.938 15 O -0.209 6.209 16 C 0.023 3.977 17 C -0.086 4.086 18 C -0.124 4.124 19 C -0.110 4.110 20 C -0.403 4.403 21 Si 1.251 2.749 22 C -0.556 4.556 23 C -0.557 4.557 24 C -0.558 4.558 25 C -0.110 4.110 26 C -0.124 4.124 27 H 0.120 0.880 28 H 0.074 0.926 29 H 0.075 0.925 30 H 0.158 0.842 31 H 0.094 0.906 32 H 0.227 0.773 33 H 0.142 0.858 34 H 0.157 0.843 35 H 0.090 0.910 36 H 0.089 0.911 37 H 0.139 0.861 38 H 0.141 0.859 39 H 0.088 0.912 40 H 0.090 0.910 41 H 0.088 0.912 42 H 0.090 0.910 43 H 0.090 0.910 44 H 0.088 0.912 45 H 0.088 0.912 46 H 0.090 0.910 47 H 0.090 0.910 48 H 0.141 0.859 49 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges 0.884 0.794 0.997 1.551 hybrid contribution -0.807 0.712 0.105 1.081 sum 0.077 1.506 1.102 1.867 Atomic orbital electron populations 1.23108 0.78277 1.04211 1.01395 1.86202 1.21226 1.25525 1.88821 1.18267 0.89094 0.85395 1.01710 1.20876 1.00293 0.90373 1.04535 1.18921 0.92707 0.93425 1.02355 1.24693 0.99445 1.03888 0.90874 1.86509 1.58727 1.47522 1.42317 0.85732 0.79448 0.75961 0.81855 1.18142 1.17322 1.17015 1.20651 0.92842 0.98146 1.02126 1.20965 1.00472 0.90686 1.06606 1.18253 0.88248 0.86100 1.01228 1.86278 1.17912 1.28089 1.88643 1.21661 0.78664 0.95184 1.02157 1.19443 0.99827 0.95335 0.94045 1.21148 0.98370 0.95610 0.97235 1.21070 0.97228 0.94486 0.98209 1.27466 1.04448 1.14224 0.94178 0.78178 0.66382 0.62958 0.67337 1.26121 1.20214 1.04675 1.04610 1.26136 1.05998 1.08600 1.15011 1.26137 1.05969 1.08573 1.15075 1.21069 0.97237 0.94499 0.98202 1.21142 0.98406 0.95601 0.97221 0.88027 0.92626 0.92472 0.84231 0.90580 0.77269 0.85792 0.84322 0.91047 0.91055 0.86136 0.85926 0.91177 0.91033 0.91169 0.91017 0.90962 0.91179 0.91175 0.90963 0.91015 0.85930 0.86147 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.01 9.81 101.05 0.99 1.00 16 2 O -0.30 -1.37 10.28 -34.20 -0.35 -1.72 16 3 C 0.10 0.43 6.70 -39.12 -0.26 0.17 16 4 C -0.14 -0.39 8.60 -39.46 -0.34 -0.73 16 5 C -0.07 -0.17 5.42 -104.62 -0.57 -0.74 16 6 C -0.08 0.00 2.81 36.01 0.10 0.10 16 7 O -0.54 -0.20 12.74 -35.23 -0.45 -0.65 16 8 Si 0.95 -0.40 25.06 -169.99 -4.26 -4.66 16 9 H -0.26 0.10 7.11 56.52 0.40 0.50 16 10 H -0.25 -0.01 7.11 56.52 0.40 0.39 16 11 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 12 C -0.12 -0.24 8.66 -39.57 -0.34 -0.58 16 13 C -0.17 -0.35 9.04 -39.46 -0.36 -0.71 16 14 C 0.11 0.44 6.70 -39.12 -0.26 0.17 16 15 O -0.30 -1.34 9.91 -34.17 -0.34 -1.68 16 16 C 0.10 0.15 4.87 36.00 0.18 0.33 16 17 C -0.09 -0.20 5.51 -104.63 -0.58 -0.78 16 18 C -0.11 -0.21 9.70 -39.58 -0.38 -0.60 16 19 C -0.09 -0.10 9.29 -39.58 -0.37 -0.47 16 20 C -0.36 -0.18 4.59 -39.58 -0.18 -0.36 16 21 Si 1.06 -2.17 12.32 -169.99 -2.09 -4.27 16 22 C -0.45 0.56 8.65 101.05 0.87 1.44 16 23 C -0.45 0.59 8.53 101.05 0.86 1.46 16 24 C -0.45 0.58 8.53 101.05 0.86 1.44 16 25 C -0.09 -0.10 9.29 -39.58 -0.37 -0.47 16 26 C -0.11 -0.20 9.70 -39.58 -0.38 -0.59 16 27 H 0.10 -0.12 8.14 -51.93 -0.42 -0.54 16 28 H 0.06 -0.05 7.66 -51.93 -0.40 -0.44 16 29 H 0.06 -0.02 7.66 -51.93 -0.40 -0.42 16 30 H 0.14 0.17 6.30 -52.48 -0.33 -0.16 16 31 H 0.08 -0.14 7.96 -51.93 -0.41 -0.55 16 32 H 0.38 -1.57 8.74 45.56 0.40 -1.17 16 33 H 0.12 0.04 4.87 -52.49 -0.26 -0.21 16 34 H 0.14 -0.05 6.30 -52.48 -0.33 -0.38 16 35 H 0.07 0.00 7.60 -51.93 -0.39 -0.40 16 36 H 0.07 0.01 7.62 -51.93 -0.40 -0.39 16 37 H 0.12 0.09 8.06 -52.49 -0.42 -0.33 16 38 H 0.12 -0.11 7.43 -52.49 -0.39 -0.50 16 39 H 0.07 -0.07 7.96 -51.93 -0.41 -0.49 16 40 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 41 H 0.07 -0.07 7.96 -51.93 -0.41 -0.49 16 42 H 0.07 -0.06 7.96 -51.93 -0.41 -0.48 16 43 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 44 H 0.07 -0.11 7.69 -51.93 -0.40 -0.51 16 45 H 0.07 -0.10 7.69 -51.93 -0.40 -0.50 16 46 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 47 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 48 H 0.12 -0.12 7.43 -52.49 -0.39 -0.51 16 49 H 0.12 0.07 8.06 -52.49 -0.42 -0.35 16 LS Contribution 402.99 15.07 6.07 6.07 Total: 0.00 -7.61 402.99 -9.00 -16.61 By element: Atomic # 1 Polarization: -2.74 SS G_CDS: -7.05 Total: -9.79 kcal Atomic # 6 Polarization: 0.61 SS G_CDS: -0.53 Total: 0.08 kcal Atomic # 8 Polarization: -2.91 SS G_CDS: -1.14 Total: -4.05 kcal Atomic # 14 Polarization: -2.57 SS G_CDS: -6.36 Total: -8.92 kcal Total LS contribution 6.07 Total: 6.07 kcal Total: -7.61 -9.00 -16.61 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_26802_9276060.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -80.682 kcal (2) G-P(sol) polarization free energy of solvation -7.607 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.289 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.002 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.609 kcal (6) G-S(sol) free energy of system = (1) + (5) -97.290 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds