Wall clock time and date at job start Mon Mar 8 2021 14:34:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86305 * 109.46792 * 2 1 4 4 C 1.50695 * 109.47465 * 239.99818 * 2 1 3 5 5 C 1.38707 * 120.02496 * 285.30116 * 4 2 1 6 6 O 1.35911 * 120.04707 * 359.97438 * 5 4 2 7 7 C 1.42901 * 117.00234 * 180.31862 * 6 5 4 8 8 C 1.53000 * 109.46989 * 180.02562 * 7 6 5 9 9 H 1.09000 * 109.46881 * 180.02562 * 8 7 6 10 10 O 1.42965 * 109.47034 * 299.99784 * 8 7 6 11 11 C 1.43092 * 113.76818 * 178.79534 * 10 8 7 12 12 C 1.53260 * 108.94333 * 302.03506 * 11 10 8 13 13 H 1.08996 * 109.57396 * 294.71269 * 12 11 10 14 14 N 1.46504 * 109.57238 * 174.46153 * 12 11 10 15 15 C 1.34523 * 124.46007 * 299.69139 * 14 12 11 16 16 O 1.21441 * 125.70953 * 0.02562 * 15 14 12 17 17 C 1.47819 * 108.58040 * 179.90957 * 15 14 12 18 18 C 1.40946 * 105.87803 * 0.35039 * 17 15 14 19 19 C 1.38562 * 119.81827 * 179.82794 * 18 17 15 20 20 C 1.38607 * 119.72200 * 359.93368 * 19 18 17 21 21 C 1.38225 * 120.45941 * 0.07011 * 20 19 18 22 22 C 1.38565 * 134.29952 * 180.10250 * 17 15 14 23 23 C 1.34527 * 124.45951 * 120.00035 * 14 12 11 24 24 O 1.21449 * 125.70800 * 359.97438 * 23 14 12 25 25 C 1.53262 * 108.84745 * 54.52107 * 12 11 10 26 26 O 1.42962 * 109.47241 * 60.00431 * 8 7 6 27 27 C 1.38746 * 119.90701 * 180.31908 * 5 4 2 28 28 C 1.38126 * 119.95501 * 359.39690 * 27 5 4 29 29 C 1.38364 * 120.04554 * 0.28436 * 28 27 5 30 30 Br 1.89097 * 119.95709 * 179.97438 * 29 28 27 31 31 C 1.38166 * 120.02285 * 104.99522 * 4 2 1 32 32 H 0.96698 * 114.00335 * 60.00129 * 1 2 3 33 33 H 1.08998 * 109.46858 * 119.99414 * 2 1 3 34 34 H 1.48498 * 109.99870 * 298.67933 * 3 2 1 35 35 H 1.48499 * 110.00050 * 59.99759 * 3 2 1 36 36 H 1.09002 * 109.46990 * 300.00357 * 7 6 5 37 37 H 1.08996 * 109.46977 * 60.00226 * 7 6 5 38 38 H 1.09004 * 109.55946 * 61.87246 * 11 10 8 39 39 H 1.08994 * 109.55905 * 182.08414 * 11 10 8 40 40 H 1.08005 * 120.14207 * 179.97438 * 19 18 17 41 41 H 1.08001 * 119.77176 * 180.02562 * 20 19 18 42 42 H 1.08004 * 119.77476 * 179.97438 * 21 20 19 43 43 H 1.08006 * 120.13936 * 0.29250 * 22 17 15 44 44 H 1.09006 * 109.55247 * 65.31773 * 25 12 11 45 45 H 1.08995 * 109.55562 * 185.52955 * 25 12 11 46 46 H 1.08002 * 120.02503 * 179.68036 * 27 5 4 47 47 H 1.08000 * 119.97818 * 180.29901 * 28 27 5 48 48 H 1.08009 * 119.97353 * 0.02562 * 31 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 1.8640 -2.0936 -1.3093 6 8 1.3453 -2.8097 -0.2771 7 6 1.3138 -4.2307 -0.4246 8 6 0.7004 -4.8598 0.8280 9 1 0.6767 -5.9438 0.7157 10 8 1.4900 -4.5166 1.9692 11 6 0.9808 -5.0377 3.2008 12 6 -0.4487 -4.5242 3.4051 13 1 -0.4329 -3.4422 3.5354 14 7 -1.0310 -5.1532 4.5932 15 6 -1.2037 -6.4786 4.7455 16 8 -0.9058 -7.3302 3.9326 17 6 -1.8141 -6.7250 6.0690 18 6 -1.9855 -5.4556 6.6570 19 6 -2.5471 -5.3511 7.9194 20 6 -2.9379 -6.4968 8.5946 21 6 -2.7698 -7.7417 8.0180 22 6 -2.2088 -7.8617 6.7561 23 6 -1.4688 -4.4810 5.6731 24 8 -1.4439 -3.2751 5.8156 25 6 -1.2840 -4.8806 2.1705 26 8 -0.6309 -4.3694 1.0045 27 6 2.3333 -2.7456 -2.4405 28 6 2.8551 -2.0157 -3.4907 29 6 2.9154 -0.6356 -3.4127 30 35 3.6309 0.3612 -4.8515 31 6 2.4537 0.0160 -2.2832 32 1 -0.3934 0.4417 -0.7650 33 1 1.7922 -0.5137 0.8900 34 1 1.5878 2.4585 -1.2242 35 1 1.5613 2.4680 1.2085 36 1 0.7114 -4.4924 -1.2945 37 1 2.3287 -4.6046 -0.5596 38 1 0.9751 -6.1270 3.1615 39 1 1.6110 -4.7057 4.0258 40 1 -2.6805 -4.3811 8.3751 41 1 -3.3761 -6.4163 9.5784 42 1 -3.0778 -8.6272 8.5542 43 1 -2.0796 -8.8370 6.3105 44 1 -1.3755 -5.9640 2.0922 45 1 -2.2752 -4.4362 2.2599 46 1 2.2865 -3.8229 -2.5019 47 1 3.2162 -2.5225 -4.3734 48 1 2.5021 1.0934 -2.2240 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_26869_13594088.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 14:34:04 Heat of formation + Delta-G solvation = -111.940272 kcal Electronic energy + Delta-G solvation = -39653.918377 eV Core-core repulsion = 34268.505857 eV Total energy + Delta-G solvation = -5385.412520 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 476.044 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -43.67680 -41.66047 -41.02705 -39.81974 -39.62929 -38.73047 -37.58446 -37.09026 -36.95956 -34.59480 -33.16056 -32.60454 -32.37287 -31.72846 -30.14454 -29.25577 -27.40295 -26.78002 -26.34747 -25.60370 -24.61338 -23.56423 -22.98087 -22.48155 -22.25696 -21.01432 -19.59339 -19.05251 -19.00252 -18.71879 -18.19665 -17.77439 -17.57910 -17.43426 -16.99823 -16.92173 -16.71897 -16.49543 -16.19853 -16.06621 -16.04403 -15.73403 -15.68230 -15.60726 -15.24799 -15.16718 -15.09542 -14.72847 -14.66723 -14.53017 -14.06286 -14.04600 -13.97812 -13.54291 -13.46958 -13.17514 -12.87809 -12.72411 -12.65363 -12.53934 -12.26114 -12.09130 -11.97742 -11.70323 -11.62680 -11.55308 -11.29274 -11.19563 -10.87137 -10.76028 -10.45918 -10.45399 -10.42705 -10.17015 -9.16430 -4.90806 -1.16962 -0.26636 0.05199 0.09265 0.68982 0.80471 0.92329 1.33928 1.61790 1.67417 1.94961 2.02134 2.25014 2.31820 2.37388 2.38091 2.42899 3.06341 3.21843 3.31601 3.35942 3.42174 3.48457 3.59106 3.67596 3.68458 3.76686 3.79066 3.85849 3.94952 3.96918 4.01948 4.03013 4.05539 4.13033 4.15053 4.17348 4.32680 4.34316 4.50108 4.53366 4.57299 4.61763 4.65992 4.70237 4.88560 4.97741 4.98522 5.05125 5.12130 5.33024 5.39443 5.42674 5.52119 5.81055 5.97872 6.23764 6.42393 6.55587 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.518 6.518 2 C -0.060 4.060 3 Si 0.680 3.320 4 C -0.143 4.143 5 C 0.174 3.826 6 O -0.277 6.277 7 C 0.073 3.927 8 C 0.246 3.754 9 H 0.086 0.914 10 O -0.369 6.369 11 C 0.049 3.951 12 C 0.075 3.925 13 H 0.130 0.870 14 N -0.570 5.570 15 C 0.576 3.424 16 O -0.460 6.460 17 C -0.143 4.143 18 C -0.139 4.139 19 C -0.042 4.042 20 C -0.092 4.092 21 C -0.094 4.094 22 C -0.042 4.042 23 C 0.575 3.425 24 O -0.451 6.451 25 C 0.049 3.951 26 O -0.366 6.366 27 C -0.208 4.208 28 C -0.040 4.040 29 C -0.128 4.128 30 Br -0.046 7.046 31 C -0.055 4.055 32 H 0.371 0.629 33 H 0.121 0.879 34 H -0.257 1.257 35 H -0.253 1.253 36 H 0.091 0.909 37 H 0.092 0.908 38 H 0.074 0.926 39 H 0.110 0.890 40 H 0.145 0.855 41 H 0.145 0.855 42 H 0.145 0.855 43 H 0.144 0.856 44 H 0.074 0.926 45 H 0.109 0.891 46 H 0.139 0.861 47 H 0.138 0.862 48 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.306 -5.791 3.799 6.932 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.324 6.324 2 C -0.170 4.170 3 Si 0.582 3.418 4 C -0.145 4.145 5 C 0.127 3.873 6 O -0.188 6.188 7 C -0.003 4.003 8 C 0.151 3.849 9 H 0.103 0.897 10 O -0.288 6.288 11 C -0.028 4.028 12 C -0.027 4.027 13 H 0.148 0.852 14 N -0.315 5.315 15 C 0.366 3.634 16 O -0.331 6.331 17 C -0.146 4.146 18 C -0.143 4.143 19 C -0.061 4.061 20 C -0.110 4.110 21 C -0.112 4.112 22 C -0.060 4.060 23 C 0.364 3.636 24 O -0.321 6.321 25 C -0.029 4.029 26 O -0.285 6.285 27 C -0.228 4.228 28 C -0.060 4.060 29 C -0.207 4.207 30 Br 0.039 6.961 31 C -0.074 4.074 32 H 0.218 0.782 33 H 0.139 0.861 34 H -0.182 1.182 35 H -0.178 1.178 36 H 0.109 0.891 37 H 0.110 0.890 38 H 0.092 0.908 39 H 0.128 0.872 40 H 0.162 0.838 41 H 0.163 0.837 42 H 0.163 0.837 43 H 0.162 0.838 44 H 0.092 0.908 45 H 0.127 0.873 46 H 0.157 0.843 47 H 0.156 0.844 48 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges 0.071 -4.331 3.389 5.499 hybrid contribution -1.283 -0.960 -0.227 1.618 sum -1.211 -5.291 3.161 6.281 Atomic orbital electron populations 1.86697 1.17302 1.79626 1.48729 1.24835 0.84142 1.10137 0.97874 0.95137 0.91600 0.74691 0.80409 1.19591 1.05653 0.91126 0.98173 1.18878 0.90891 0.90878 0.86675 1.86322 1.76184 1.18170 1.38143 1.22938 1.01645 0.79758 0.95928 1.23584 0.78850 0.96250 0.86263 0.89710 1.88249 1.49377 1.76583 1.14602 1.23009 0.92674 0.99326 0.87837 1.22649 0.94926 1.01280 0.83853 0.85192 1.46455 1.57959 1.08827 1.18295 1.18453 0.76787 0.81455 0.86736 1.90808 1.46920 1.47826 1.47567 1.20468 1.03858 0.95160 0.95161 1.20474 1.03772 0.93510 0.96553 1.20872 0.93617 1.00278 0.91325 1.21559 0.97333 0.91693 1.00426 1.21554 0.96604 0.98665 0.94352 1.20854 0.93956 0.97683 0.93538 1.18421 0.76306 0.87405 0.81435 1.90865 1.50461 1.13073 1.77685 1.23004 0.96496 1.00323 0.83056 1.88282 1.26882 1.70775 1.42581 1.21302 1.06240 1.00759 0.94467 1.20957 0.95085 0.91714 0.98259 1.21571 1.08904 0.94669 0.95571 1.96770 1.84182 1.72397 1.42741 1.20973 0.95233 1.00268 0.90948 0.78206 0.86119 1.18202 1.17772 0.89145 0.89046 0.90811 0.87236 0.83751 0.83692 0.83711 0.83810 0.90779 0.87304 0.84339 0.84380 0.83944 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -1.78 12.88 -35.23 -0.45 -2.23 16 2 C -0.06 -0.11 2.37 36.00 0.09 -0.03 16 3 Si 0.68 0.35 30.25 -169.99 -5.14 -4.79 16 4 C -0.14 -0.24 5.27 -104.48 -0.55 -0.80 16 5 C 0.17 0.32 6.66 -39.22 -0.26 0.06 16 6 O -0.28 -0.75 9.26 -39.94 -0.37 -1.12 16 7 C 0.07 -0.02 4.83 37.16 0.18 0.16 16 8 C 0.25 0.22 3.59 37.16 0.13 0.36 16 9 H 0.09 -0.10 8.14 -51.93 -0.42 -0.53 16 10 O -0.37 -0.81 10.43 -63.56 -0.66 -1.48 16 11 C 0.05 0.05 6.33 37.29 0.24 0.28 16 12 C 0.07 0.11 3.07 -67.66 -0.21 -0.10 16 13 H 0.13 0.35 7.59 -51.93 -0.39 -0.04 16 14 N -0.57 -0.74 2.53 -110.22 -0.28 -1.02 16 15 C 0.58 0.71 7.35 -12.45 -0.09 0.62 16 16 O -0.46 -1.27 15.17 5.42 0.08 -1.18 16 17 C -0.14 0.03 6.41 -104.83 -0.67 -0.65 16 18 C -0.14 -0.01 6.40 -104.83 -0.67 -0.69 16 19 C -0.04 0.08 10.09 -39.33 -0.40 -0.31 16 20 C -0.09 0.34 10.03 -39.45 -0.40 -0.05 16 21 C -0.09 0.36 10.03 -39.45 -0.40 -0.04 16 22 C -0.04 0.09 10.09 -39.32 -0.40 -0.30 16 23 C 0.58 1.19 8.02 -12.45 -0.10 1.09 16 24 O -0.45 -2.15 17.44 5.41 0.09 -2.06 16 25 C 0.05 0.07 6.32 37.29 0.24 0.30 16 26 O -0.37 -0.99 10.43 -63.56 -0.66 -1.66 16 27 C -0.21 -0.02 9.04 -39.43 -0.36 -0.38 16 28 C -0.04 -0.01 9.78 -39.58 -0.39 -0.40 16 29 C -0.13 -0.16 6.22 -39.50 -0.25 -0.40 16 30 Br -0.05 -0.06 33.70 -68.01 -2.29 -2.35 16 31 C -0.05 -0.06 8.40 -39.58 -0.33 -0.39 16 32 H 0.37 0.12 8.70 45.56 0.40 0.52 16 33 H 0.12 0.29 7.84 -51.93 -0.41 -0.12 16 34 H -0.26 -0.45 6.68 56.52 0.38 -0.08 16 35 H -0.25 -0.93 7.11 56.52 0.40 -0.53 16 36 H 0.09 -0.17 7.66 -51.93 -0.40 -0.57 16 37 H 0.09 -0.21 7.66 -51.93 -0.40 -0.61 16 38 H 0.07 0.06 6.72 -51.93 -0.35 -0.29 16 39 H 0.11 0.02 8.14 -51.93 -0.42 -0.40 16 40 H 0.14 -0.45 8.06 -52.48 -0.42 -0.88 16 41 H 0.15 -0.89 8.06 -52.49 -0.42 -1.31 16 42 H 0.15 -0.90 8.06 -52.48 -0.42 -1.33 16 43 H 0.14 -0.52 8.06 -52.48 -0.42 -0.95 16 44 H 0.07 0.08 6.65 -51.93 -0.35 -0.26 16 45 H 0.11 0.09 8.14 -51.93 -0.42 -0.33 16 46 H 0.14 -0.32 6.30 -52.49 -0.33 -0.65 16 47 H 0.14 -0.19 8.06 -52.49 -0.42 -0.61 16 48 H 0.14 0.03 4.86 -52.48 -0.26 -0.22 16 LS Contribution 424.90 15.07 6.40 6.40 Total: 0.00 -9.37 424.90 -12.96 -22.32 By element: Atomic # 1 Polarization: -4.10 SS G_CDS: -5.08 Total: -9.18 kcal Atomic # 6 Polarization: 2.94 SS G_CDS: -4.59 Total: -1.65 kcal Atomic # 7 Polarization: -0.74 SS G_CDS: -0.28 Total: -1.02 kcal Atomic # 8 Polarization: -7.76 SS G_CDS: -1.97 Total: -9.73 kcal Atomic # 14 Polarization: 0.35 SS G_CDS: -5.14 Total: -4.79 kcal Atomic # 35 Polarization: -0.06 SS G_CDS: -2.29 Total: -2.35 kcal Total LS contribution 6.40 Total: 6.40 kcal Total: -9.37 -12.96 -22.32 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_26869_13594088.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -89.617 kcal (2) G-P(sol) polarization free energy of solvation -9.366 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -98.983 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.958 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.323 kcal (6) G-S(sol) free energy of system = (1) + (5) -111.940 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds