Wall clock time and date at job start Mon Mar 8 2021 15:51:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86298 * 109.46984 * 2 1 4 4 C 1.50699 * 109.47361 * 240.00214 * 2 1 3 5 5 C 1.38118 * 120.02253 * 104.97330 * 4 2 1 6 6 C 1.38372 * 120.04385 * 180.02562 * 5 4 2 7 7 Br 1.89100 * 119.95249 * 180.02562 * 6 5 4 8 8 C 1.38320 * 120.09122 * 0.02808 * 6 5 4 9 9 C 1.38166 * 120.04533 * 359.71618 * 8 6 5 10 10 C 1.38700 * 119.95514 * 0.53804 * 9 8 6 11 11 O 1.35915 * 120.04999 * 179.74218 * 10 9 8 12 12 C 1.42901 * 116.99609 * 359.72214 * 11 10 9 13 13 C 1.52998 * 109.47046 * 180.02562 * 12 11 10 14 14 H 1.09000 * 109.46903 * 305.00059 * 13 12 11 15 15 C 1.52997 * 109.47449 * 64.99681 * 13 12 11 16 16 C 1.52998 * 109.47449 * 179.97438 * 15 13 12 17 17 C 1.52999 * 109.47067 * 300.00474 * 16 15 13 18 18 H 1.09000 * 109.47181 * 299.99734 * 17 16 15 19 19 O 1.42902 * 109.47124 * 180.02562 * 17 16 15 20 20 C 1.52997 * 109.47373 * 59.99480 * 17 16 15 21 21 C 1.52998 * 109.47449 * 300.00286 * 20 17 16 22 22 H 0.96699 * 114.00342 * 179.97438 * 1 2 3 23 23 H 1.08999 * 109.47280 * 120.00037 * 2 1 3 24 24 H 1.48507 * 110.00244 * 179.97438 * 3 2 1 25 25 H 1.48498 * 110.00323 * 301.32107 * 3 2 1 26 26 H 1.08001 * 119.97905 * 0.02761 * 5 4 2 27 27 H 1.08005 * 119.97434 * 179.97438 * 8 6 5 28 28 H 1.08002 * 120.01988 * 180.29663 * 9 8 6 29 29 H 1.08999 * 109.47144 * 300.00202 * 12 11 10 30 30 H 1.08998 * 109.47043 * 59.99801 * 12 11 10 31 31 H 1.08999 * 109.47516 * 300.00723 * 15 13 12 32 32 H 1.09000 * 109.46760 * 60.00290 * 15 13 12 33 33 H 1.08996 * 109.47008 * 180.02562 * 16 15 13 34 34 H 1.09000 * 109.46903 * 60.00378 * 16 15 13 35 35 H 0.96699 * 114.00051 * 59.99429 * 19 17 16 36 36 H 1.08999 * 109.47516 * 179.97438 * 20 17 16 37 37 H 1.09003 * 109.46559 * 60.00492 * 20 17 16 38 38 H 1.09000 * 109.46903 * 299.99622 * 21 20 17 39 39 H 1.08996 * 109.47008 * 179.97438 * 21 20 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.4530 0.0159 -2.2831 6 6 2.9139 -0.6358 -3.4133 7 35 3.6283 0.3610 -4.8527 8 6 2.8528 -2.0155 -3.4918 9 6 2.3365 -2.7460 -2.4388 10 6 1.8691 -2.0944 -1.3071 11 8 1.3560 -2.8108 -0.2723 12 6 1.3232 -4.2317 -0.4204 13 6 0.7167 -4.8614 0.8352 14 1 1.2710 -4.5285 1.7127 15 6 -0.7467 -4.4340 0.9642 16 6 -1.3534 -5.0642 2.2194 17 6 -1.2747 -6.5885 2.1138 18 1 -1.8290 -6.9210 1.2361 19 8 -1.8419 -7.1771 3.2859 20 6 0.1887 -7.0159 1.9848 21 6 0.7954 -6.3857 0.7296 22 1 -0.3934 -0.8834 -0.0004 23 1 1.7923 -0.5138 0.8900 24 1 3.5349 1.7703 0.0006 25 1 1.5353 2.4771 -1.1920 26 1 2.5012 1.0932 -2.2240 27 1 3.2127 -2.5222 -4.3750 28 1 2.2934 -3.8235 -2.4985 29 1 0.7159 -4.4928 -1.2870 30 1 2.3372 -4.6058 -0.5614 31 1 -0.8029 -3.3480 1.0389 32 1 -1.3011 -4.7669 0.0867 33 1 -2.3961 -4.7600 2.3110 34 1 -0.7991 -4.7317 3.0971 35 1 -2.7703 -6.9486 3.4309 36 1 0.2448 -8.1019 1.9100 37 1 0.7429 -6.6835 2.8625 38 1 0.2411 -6.7182 -0.1481 39 1 1.8380 -6.6899 0.6380 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_26869_16737254.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 15:51:44 Heat of formation + Delta-G solvation = -103.602067 kcal Electronic energy + Delta-G solvation = -22371.692885 eV Core-core repulsion = 18905.697407 eV Total energy + Delta-G solvation = -3465.995478 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.050 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -41.74753 -40.17484 -38.81752 -37.62677 -36.69820 -33.34151 -32.79336 -31.84543 -31.80796 -29.79272 -26.94982 -26.77580 -23.84769 -23.72851 -22.59598 -22.04978 -20.85944 -19.45697 -18.39402 -18.20452 -17.62575 -17.18991 -16.74956 -16.43163 -15.99428 -15.67422 -15.48450 -15.39479 -14.92146 -14.81582 -14.48222 -14.07395 -13.96177 -13.70864 -13.34769 -13.19240 -13.04084 -12.82468 -12.77691 -12.32349 -12.24526 -12.09212 -11.67789 -11.63494 -11.55193 -11.42190 -11.28526 -11.09422 -11.07739 -10.70628 -10.32501 -9.36515 -4.90111 -0.13394 -0.12273 0.46388 1.29403 1.57442 1.87341 1.90687 2.24695 3.22425 3.32577 3.43834 3.64247 3.68393 3.74905 3.79746 3.85946 3.94872 4.07323 4.08186 4.17125 4.27108 4.31130 4.35487 4.36558 4.48841 4.49555 4.51372 4.58794 4.80117 4.81872 4.89485 4.93790 4.99334 5.06762 5.10227 5.16096 5.19217 5.25604 5.35104 5.44743 6.12667 6.58308 6.85804 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.075 4.075 3 Si 0.798 3.202 4 C -0.154 4.154 5 C -0.073 4.073 6 C -0.138 4.138 7 Br -0.051 7.051 8 C -0.045 4.045 9 C -0.195 4.195 10 C 0.160 3.840 11 O -0.310 6.310 12 C 0.056 3.944 13 C -0.082 4.082 14 H 0.076 0.924 15 C -0.109 4.109 16 C -0.147 4.147 17 C 0.099 3.901 18 H 0.062 0.938 19 O -0.592 6.592 20 C -0.114 4.114 21 C -0.104 4.104 22 H 0.374 0.626 23 H 0.089 0.911 24 H -0.267 1.267 25 H -0.287 1.287 26 H 0.128 0.872 27 H 0.158 0.842 28 H 0.169 0.831 29 H 0.081 0.919 30 H 0.079 0.921 31 H 0.071 0.929 32 H 0.071 0.929 33 H 0.073 0.927 34 H 0.060 0.940 35 H 0.393 0.607 36 H 0.067 0.933 37 H 0.060 0.940 38 H 0.079 0.921 39 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.184 -3.553 1.094 3.901 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.183 4.183 3 Si 0.700 3.300 4 C -0.156 4.156 5 C -0.092 4.092 6 C -0.218 4.218 7 Br 0.034 6.966 8 C -0.065 4.065 9 C -0.214 4.214 10 C 0.113 3.887 11 O -0.223 6.223 12 C -0.018 4.018 13 C -0.101 4.101 14 H 0.095 0.905 15 C -0.146 4.146 16 C -0.185 4.185 17 C 0.041 3.959 18 H 0.080 0.920 19 O -0.401 6.401 20 C -0.152 4.152 21 C -0.141 4.141 22 H 0.223 0.777 23 H 0.107 0.893 24 H -0.193 1.193 25 H -0.214 1.214 26 H 0.145 0.855 27 H 0.175 0.825 28 H 0.186 0.814 29 H 0.099 0.901 30 H 0.097 0.903 31 H 0.090 0.910 32 H 0.090 0.910 33 H 0.092 0.908 34 H 0.079 0.921 35 H 0.242 0.758 36 H 0.086 0.914 37 H 0.079 0.921 38 H 0.098 0.902 39 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 0.149 -2.150 0.389 2.190 hybrid contribution -0.616 -1.510 -0.644 1.754 sum -0.467 -3.661 -0.254 3.699 Atomic orbital electron populations 1.86694 1.17077 1.34090 1.97096 1.25203 0.84731 1.13473 0.94920 0.92480 0.76580 0.75125 0.85797 1.19810 1.05760 0.91746 0.98323 1.20871 0.96761 0.99551 0.92055 1.21746 1.09155 0.95590 0.95267 1.96754 1.84218 1.72867 1.42713 1.21243 0.94922 0.90979 0.99352 1.21611 1.04327 1.02174 0.93314 1.18878 0.92028 0.90251 0.87520 1.86046 1.76654 1.21300 1.38304 1.23194 1.02294 0.76342 1.00002 1.21173 0.96823 0.95234 0.96823 0.90535 1.21501 0.94435 1.00949 0.97723 1.22212 1.01914 0.95454 0.98916 1.21938 0.94699 0.91930 0.87339 0.92016 1.86481 1.32025 1.75015 1.46544 1.21464 0.94072 1.00957 0.98675 1.21432 1.02291 0.92599 0.97792 0.77729 0.89316 1.19293 1.21394 0.85453 0.82477 0.81398 0.90059 0.90312 0.91041 0.91024 0.90834 0.92120 0.75756 0.91390 0.92109 0.90198 0.89947 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.71 12.65 -148.98 -1.89 -3.60 16 2 C -0.07 -0.17 2.33 71.24 0.17 0.00 16 3 Si 0.80 1.47 30.40 68.60 2.09 3.56 16 4 C -0.15 -0.64 5.28 -19.77 -0.10 -0.74 16 5 C -0.07 -0.46 8.40 22.27 0.19 -0.27 16 6 C -0.14 -0.66 6.22 22.32 0.14 -0.53 16 7 Br -0.05 -0.26 33.70 -20.37 -0.69 -0.94 16 8 C -0.05 -0.02 9.78 22.27 0.22 0.20 16 9 C -0.20 0.34 9.04 22.36 0.20 0.54 16 10 C 0.16 0.13 6.62 22.50 0.15 0.28 16 11 O -0.31 0.64 8.58 -92.59 -0.79 -0.16 16 12 C 0.06 -0.39 4.12 71.98 0.30 -0.09 16 13 C -0.08 0.52 2.43 -10.80 -0.03 0.50 16 14 H 0.08 -0.31 8.14 -2.39 -0.02 -0.33 16 15 C -0.11 0.63 5.10 30.59 0.16 0.79 16 16 C -0.15 0.60 5.55 30.59 0.17 0.77 16 17 C 0.10 -0.24 3.47 30.59 0.11 -0.14 16 18 H 0.06 -0.25 8.14 -2.39 -0.02 -0.27 16 19 O -0.59 -0.61 13.32 -148.98 -1.98 -2.59 16 20 C -0.11 0.30 5.57 30.59 0.17 0.47 16 21 C -0.10 0.74 5.20 30.59 0.16 0.89 16 22 H 0.37 -0.47 8.60 -74.06 -0.64 -1.11 16 23 H 0.09 -0.01 7.83 -2.39 -0.02 -0.03 16 24 H -0.27 -1.32 7.11 99.48 0.71 -0.61 16 25 H -0.29 -2.24 6.81 99.48 0.68 -1.57 16 26 H 0.13 0.94 4.94 -2.91 -0.01 0.92 16 27 H 0.16 -0.56 8.06 -2.91 -0.02 -0.58 16 28 H 0.17 -1.31 6.30 -2.91 -0.02 -1.32 16 29 H 0.08 -0.75 7.67 -2.39 -0.02 -0.77 16 30 H 0.08 -0.69 7.65 -2.39 -0.02 -0.70 16 31 H 0.07 -0.34 7.82 -2.39 -0.02 -0.36 16 32 H 0.07 -0.49 8.14 -2.39 -0.02 -0.51 16 33 H 0.07 -0.39 8.14 -2.39 -0.02 -0.41 16 34 H 0.06 -0.09 8.14 -2.39 -0.02 -0.11 16 35 H 0.39 -2.58 9.08 -74.06 -0.67 -3.26 16 36 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 37 H 0.06 -0.02 8.14 -2.39 -0.02 -0.04 16 38 H 0.08 -0.69 8.14 -2.39 -0.02 -0.71 16 39 H 0.08 -0.69 8.14 -2.39 -0.02 -0.71 16 Total: 0.00 -12.14 332.89 -1.51 -13.65 By element: Atomic # 1 Polarization: -12.36 SS G_CDS: -0.23 Total: -12.59 kcal Atomic # 6 Polarization: 0.68 SS G_CDS: 1.99 Total: 2.67 kcal Atomic # 8 Polarization: -1.68 SS G_CDS: -4.66 Total: -6.35 kcal Atomic # 14 Polarization: 1.47 SS G_CDS: 2.09 Total: 3.56 kcal Atomic # 35 Polarization: -0.26 SS G_CDS: -0.69 Total: -0.94 kcal Total: -12.14 -1.51 -13.65 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_26869_16737254.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -89.953 kcal (2) G-P(sol) polarization free energy of solvation -12.143 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -102.095 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.507 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.650 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.602 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds