Wall clock time and date at job start Mon Mar 8 2021 14:01:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.42899 * 114.00488 * 2 1 4 4 C 1.53006 * 112.84809 * 291.84759 * 3 2 1 5 5 F 1.39901 * 109.46862 * 65.65647 * 4 3 2 6 6 F 1.39898 * 109.47171 * 185.65407 * 4 3 2 7 7 F 1.39890 * 109.47115 * 305.65625 * 4 3 2 8 8 C 1.53784 * 113.61797 * 160.54089 * 3 2 1 9 9 C 1.53780 * 87.08106 * 270.88752 * 8 3 2 10 10 H 1.09004 * 113.61419 * 220.02091 * 9 8 3 11 11 C 1.52992 * 113.69275 * 89.12579 * 9 8 3 12 12 O 1.42901 * 109.47108 * 87.46679 * 11 9 8 13 13 C 1.35920 * 116.99966 * 179.97438 * 12 11 9 14 14 C 1.38702 * 120.04303 * 179.72274 * 13 12 11 15 15 C 1.50700 * 120.02425 * 359.97438 * 14 13 12 16 16 O 1.42897 * 109.47038 * 74.99778 * 15 14 13 17 17 Si 1.86302 * 109.46877 * 194.99771 * 15 14 13 18 18 C 1.38163 * 119.94979 * 179.69988 * 14 13 12 19 19 C 1.38324 * 120.04916 * 0.57234 * 18 14 13 20 20 Br 1.89100 * 119.95799 * 179.74340 * 19 18 14 21 21 C 1.38372 * 120.08596 * 359.73100 * 19 18 14 22 22 C 1.38115 * 120.04527 * 359.96764 * 21 19 18 23 23 C 1.53780 * 113.61273 * 63.04170 * 3 2 1 24 24 H 1.09000 * 109.47257 * 306.30951 * 1 2 3 25 25 H 1.09005 * 109.46885 * 66.30338 * 1 2 3 26 26 H 1.08990 * 109.47603 * 186.30813 * 1 2 3 27 27 H 1.09005 * 113.61184 * 25.43538 * 8 3 2 28 28 H 1.09002 * 113.61411 * 156.33294 * 8 3 2 29 29 H 1.09007 * 109.46931 * 207.46278 * 11 9 8 30 30 H 1.08999 * 109.47381 * 327.46507 * 11 9 8 31 31 H 1.08996 * 109.47178 * 314.99518 * 15 14 13 32 32 H 0.96705 * 113.99942 * 180.02562 * 16 15 14 33 33 H 1.48506 * 109.99754 * 178.67852 * 17 15 14 34 34 H 1.48497 * 110.00242 * 300.00016 * 17 15 14 35 35 H 1.07999 * 119.97645 * 180.29960 * 18 14 13 36 36 H 1.08001 * 119.96984 * 180.02562 * 21 19 18 37 37 H 1.08007 * 120.01752 * 180.02562 * 22 21 19 38 38 H 1.09005 * 113.61408 * 203.66684 * 23 3 2 39 39 H 1.08994 * 113.61670 * 334.48516 * 23 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 1.7726 2.0616 -1.3087 5 9 0.4056 2.3201 -1.4563 6 9 2.4757 3.2708 -1.2829 7 9 2.2191 1.2854 -2.3835 8 6 3.4745 1.3278 0.4694 9 6 2.9320 1.5112 1.8966 10 1 3.5082 2.2166 2.4954 11 6 2.6630 0.1935 2.6260 12 8 3.8560 -0.2396 3.2827 13 6 3.7877 -1.4028 3.9824 14 6 4.9100 -1.8849 4.6395 15 6 6.2068 -1.1196 4.5777 16 8 6.1240 0.0271 5.4263 17 14 7.6019 -2.2148 5.1479 18 6 4.8368 -3.0644 5.3553 19 6 3.6484 -3.7704 5.4072 20 35 3.5530 -5.3882 6.3818 21 6 2.5293 -3.2943 4.7473 22 6 2.5967 -2.1125 4.0357 23 6 1.6773 2.1280 1.2559 24 1 -0.3634 0.6085 0.8281 25 1 -0.3633 0.4130 -0.9411 26 1 -0.3634 -1.0213 0.1129 27 1 3.9959 0.3824 0.3186 28 1 4.0376 2.1860 0.1026 29 1 1.8750 0.3414 3.3646 30 1 2.3493 -0.5627 1.9065 31 1 6.3916 -0.8001 3.5521 32 1 6.9254 0.5682 5.4356 33 1 8.8906 -1.4820 5.0615 34 1 7.3618 -2.6572 6.5450 35 1 5.7092 -3.4377 5.8710 36 1 1.6023 -3.8469 4.7894 37 1 1.7227 -1.7411 3.5211 38 1 1.7491 3.2050 1.1042 39 1 0.7471 1.8297 1.7393 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_26869_17321600.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 14:01:35 Heat of formation + Delta-G solvation = -192.078173 kcal Electronic energy + Delta-G solvation = -30098.773712 eV Core-core repulsion = 25220.579696 eV Total energy + Delta-G solvation = -4878.194017 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.022 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -51.20999 -48.76443 -48.64112 -41.94107 -41.12686 -38.77258 -37.68069 -37.16416 -33.28106 -32.63401 -30.91121 -29.58492 -28.39177 -27.42056 -26.95355 -26.79060 -24.03062 -22.95460 -22.36953 -20.67910 -19.90577 -19.52075 -19.31175 -19.14521 -18.53333 -17.55890 -17.47905 -16.90432 -16.80607 -16.63238 -16.00744 -15.86612 -15.70681 -15.55619 -15.48406 -15.19151 -15.14427 -15.02912 -14.85474 -14.80718 -14.50674 -14.22308 -14.08704 -13.88370 -13.66471 -13.36391 -13.24896 -12.93448 -12.86271 -12.62766 -12.31833 -12.14529 -11.91742 -11.78447 -11.75098 -11.30933 -11.20541 -10.90937 -10.44338 -10.16613 -9.18060 -4.98703 0.04156 0.08905 0.68517 1.24824 1.50293 1.55843 1.86252 1.91430 1.94319 2.38724 2.48534 2.57354 2.79163 3.15196 3.27977 3.29891 3.39953 3.52565 3.64460 3.72532 3.96602 3.97503 4.02748 4.08027 4.11510 4.19277 4.22721 4.28432 4.29385 4.41688 4.42771 4.50125 4.58613 4.63756 4.66080 4.81116 4.95674 5.04674 5.12046 5.43517 5.54009 6.21253 6.47308 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.006 3.994 2 O -0.333 6.333 3 C 0.039 3.961 4 C 0.438 3.562 5 F -0.182 7.182 6 F -0.175 7.175 7 F -0.174 7.174 8 C -0.110 4.110 9 C -0.097 4.097 10 H 0.107 0.893 11 C 0.066 3.934 12 O -0.297 6.297 13 C 0.175 3.825 14 C -0.101 4.101 15 C -0.061 4.061 16 O -0.531 6.531 17 Si 0.677 3.323 18 C -0.050 4.050 19 C -0.127 4.127 20 Br -0.045 7.045 21 C -0.041 4.041 22 C -0.204 4.204 23 C -0.145 4.145 24 H 0.055 0.945 25 H 0.059 0.941 26 H 0.101 0.899 27 H 0.100 0.900 28 H 0.115 0.885 29 H 0.068 0.932 30 H 0.086 0.914 31 H 0.079 0.921 32 H 0.379 0.621 33 H -0.257 1.257 34 H -0.251 1.251 35 H 0.143 0.857 36 H 0.139 0.861 37 H 0.139 0.861 38 H 0.114 0.886 39 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.822 0.408 -0.994 1.353 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 O -0.251 6.251 3 C -0.003 4.003 4 C 0.383 3.617 5 F -0.163 7.163 6 F -0.157 7.157 7 F -0.155 7.155 8 C -0.147 4.147 9 C -0.116 4.116 10 H 0.125 0.875 11 C -0.009 4.009 12 O -0.210 6.210 13 C 0.128 3.872 14 C -0.103 4.103 15 C -0.171 4.171 16 O -0.338 6.338 17 Si 0.578 3.422 18 C -0.069 4.069 19 C -0.206 4.206 20 Br 0.040 6.960 21 C -0.061 4.061 22 C -0.224 4.224 23 C -0.182 4.182 24 H 0.074 0.926 25 H 0.077 0.923 26 H 0.120 0.880 27 H 0.118 0.882 28 H 0.133 0.867 29 H 0.086 0.914 30 H 0.104 0.896 31 H 0.097 0.903 32 H 0.226 0.774 33 H -0.182 1.182 34 H -0.176 1.176 35 H 0.160 0.840 36 H 0.156 0.844 37 H 0.157 0.843 38 H 0.132 0.868 39 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -0.552 -0.574 -0.016 0.796 hybrid contribution -0.528 1.838 -0.379 1.950 sum -1.080 1.265 -0.395 1.709 Atomic orbital electron populations 1.23227 0.79429 1.04303 1.02008 1.88080 1.21228 1.21914 1.93848 1.24017 1.00271 0.86456 0.89575 1.21192 0.74101 0.78421 0.87949 1.93175 1.32311 1.94359 1.96484 1.93187 1.78835 1.46952 1.96691 1.93221 1.88987 1.74559 1.58723 1.23230 0.91171 1.05703 0.94626 1.22051 0.97414 0.96577 0.95516 0.87468 1.22818 0.86041 0.96088 0.95922 1.86096 1.36469 1.35939 1.62465 1.18778 0.92979 0.85088 0.90379 1.18507 0.93858 0.96092 1.01838 1.24542 1.01804 0.92897 0.97824 1.86608 1.41590 1.37888 1.67714 0.95117 0.76089 0.86077 0.84905 1.20906 0.97129 0.93127 0.95753 1.21553 0.96839 0.96561 1.05665 1.96768 1.98929 1.27635 1.72639 1.20964 0.97379 0.94572 0.93184 1.21279 0.97829 0.97661 1.05592 1.23627 0.99743 1.01200 0.93644 0.92618 0.92288 0.88026 0.88158 0.86685 0.91363 0.89556 0.90274 0.77369 1.18160 1.17611 0.83968 0.84351 0.84286 0.86752 0.88686 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.28 101.05 1.04 1.02 16 2 O -0.33 0.26 8.52 -35.23 -0.30 -0.04 16 3 C 0.04 -0.05 0.79 -89.80 -0.07 -0.12 16 4 C 0.44 0.21 2.66 37.16 0.10 0.30 16 5 F -0.18 -0.16 14.94 2.25 0.03 -0.13 16 6 F -0.18 -0.10 15.72 2.25 0.04 -0.06 16 7 F -0.17 -0.39 17.26 2.25 0.04 -0.35 16 8 C -0.11 0.23 6.92 -25.92 -0.18 0.05 16 9 C -0.10 0.25 4.19 -89.81 -0.38 -0.13 16 10 H 0.11 -0.28 8.14 -51.93 -0.42 -0.71 16 11 C 0.07 -0.11 4.33 37.15 0.16 0.05 16 12 O -0.30 -0.24 9.47 -19.49 -0.18 -0.43 16 13 C 0.17 0.23 6.66 -39.22 -0.26 -0.03 16 14 C -0.10 -0.16 5.30 -104.48 -0.55 -0.72 16 15 C -0.06 -0.03 2.37 36.01 0.09 0.06 16 16 O -0.53 -0.81 12.86 -35.23 -0.45 -1.27 16 17 Si 0.68 -0.38 30.21 -169.99 -5.14 -5.52 16 18 C -0.05 -0.07 8.39 -39.58 -0.33 -0.40 16 19 C -0.13 -0.17 6.22 -39.50 -0.25 -0.41 16 20 Br -0.04 -0.06 33.70 -68.01 -2.29 -2.35 16 21 C -0.04 -0.01 9.78 -39.58 -0.39 -0.40 16 22 C -0.20 0.00 9.04 -39.44 -0.36 -0.36 16 23 C -0.14 0.45 6.62 -25.92 -0.17 0.28 16 24 H 0.06 -0.21 6.39 -51.93 -0.33 -0.54 16 25 H 0.06 -0.10 6.32 -51.93 -0.33 -0.42 16 26 H 0.10 -0.39 8.14 -51.93 -0.42 -0.81 16 27 H 0.10 -0.16 8.10 -51.93 -0.42 -0.58 16 28 H 0.11 -0.33 7.30 -51.93 -0.38 -0.71 16 29 H 0.07 -0.17 7.66 -51.92 -0.40 -0.56 16 30 H 0.09 -0.15 5.65 -51.93 -0.29 -0.44 16 31 H 0.08 -0.05 7.83 -51.93 -0.41 -0.46 16 32 H 0.38 -0.91 8.74 45.56 0.40 -0.52 16 33 H -0.26 -0.30 7.11 56.52 0.40 0.10 16 34 H -0.25 -0.53 6.74 56.52 0.38 -0.15 16 35 H 0.14 0.09 4.90 -52.49 -0.26 -0.17 16 36 H 0.14 -0.20 8.06 -52.49 -0.42 -0.63 16 37 H 0.14 -0.29 6.30 -52.48 -0.33 -0.62 16 38 H 0.11 -0.42 7.69 -51.93 -0.40 -0.82 16 39 H 0.09 -0.38 6.48 -51.93 -0.34 -0.72 16 LS Contribution 347.78 15.07 5.24 5.24 Total: 0.00 -5.93 347.78 -8.54 -14.46 By element: Atomic # 1 Polarization: -4.79 SS G_CDS: -3.97 Total: -8.76 kcal Atomic # 6 Polarization: 0.75 SS G_CDS: -1.55 Total: -0.81 kcal Atomic # 8 Polarization: -0.79 SS G_CDS: -0.94 Total: -1.73 kcal Atomic # 9 Polarization: -0.65 SS G_CDS: 0.11 Total: -0.54 kcal Atomic # 14 Polarization: -0.38 SS G_CDS: -5.14 Total: -5.52 kcal Atomic # 35 Polarization: -0.06 SS G_CDS: -2.29 Total: -2.35 kcal Total LS contribution 5.24 Total: 5.24 kcal Total: -5.93 -8.54 -14.46 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_26869_17321600.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -177.616 kcal (2) G-P(sol) polarization free energy of solvation -5.926 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -183.542 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.536 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.462 kcal (6) G-S(sol) free energy of system = (1) + (5) -192.078 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds