Wall clock time and date at job start Mon Mar 8 2021 14:01:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.42899 * 114.00488 * 2 1 4 4 C 1.53006 * 112.84809 * 291.84759 * 3 2 1 5 5 F 1.39901 * 109.46862 * 65.65647 * 4 3 2 6 6 F 1.39898 * 109.47171 * 185.65407 * 4 3 2 7 7 F 1.39890 * 109.47115 * 305.65625 * 4 3 2 8 8 C 1.53784 * 113.61797 * 160.54089 * 3 2 1 9 9 C 1.53780 * 87.08106 * 270.88752 * 8 3 2 10 10 H 1.09004 * 113.61419 * 220.02091 * 9 8 3 11 11 C 1.52992 * 113.69275 * 89.12579 * 9 8 3 12 12 O 1.42901 * 109.47108 * 87.46679 * 11 9 8 13 13 C 1.35920 * 116.99966 * 179.97438 * 12 11 9 14 14 C 1.38702 * 120.04303 * 179.72274 * 13 12 11 15 15 C 1.50700 * 120.02425 * 359.97438 * 14 13 12 16 16 O 1.42897 * 109.47038 * 74.99778 * 15 14 13 17 17 Si 1.86302 * 109.46877 * 194.99771 * 15 14 13 18 18 C 1.38163 * 119.94979 * 179.69988 * 14 13 12 19 19 C 1.38324 * 120.04916 * 0.57234 * 18 14 13 20 20 Br 1.89100 * 119.95799 * 179.74340 * 19 18 14 21 21 C 1.38372 * 120.08596 * 359.73100 * 19 18 14 22 22 C 1.38115 * 120.04527 * 359.96764 * 21 19 18 23 23 C 1.53780 * 113.61273 * 63.04170 * 3 2 1 24 24 H 1.09000 * 109.47257 * 306.30951 * 1 2 3 25 25 H 1.09005 * 109.46885 * 66.30338 * 1 2 3 26 26 H 1.08990 * 109.47603 * 186.30813 * 1 2 3 27 27 H 1.09005 * 113.61184 * 25.43538 * 8 3 2 28 28 H 1.09002 * 113.61411 * 156.33294 * 8 3 2 29 29 H 1.09007 * 109.46931 * 207.46278 * 11 9 8 30 30 H 1.08999 * 109.47381 * 327.46507 * 11 9 8 31 31 H 1.08996 * 109.47178 * 314.99518 * 15 14 13 32 32 H 0.96705 * 113.99942 * 180.02562 * 16 15 14 33 33 H 1.48506 * 109.99754 * 178.67852 * 17 15 14 34 34 H 1.48497 * 110.00242 * 300.00016 * 17 15 14 35 35 H 1.07999 * 119.97645 * 180.29960 * 18 14 13 36 36 H 1.08001 * 119.96984 * 180.02562 * 21 19 18 37 37 H 1.08007 * 120.01752 * 180.02562 * 22 21 19 38 38 H 1.09005 * 113.61408 * 203.66684 * 23 3 2 39 39 H 1.08994 * 113.61670 * 334.48516 * 23 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 1.7726 2.0616 -1.3087 5 9 0.4056 2.3201 -1.4563 6 9 2.4757 3.2708 -1.2829 7 9 2.2191 1.2854 -2.3835 8 6 3.4745 1.3278 0.4694 9 6 2.9320 1.5112 1.8966 10 1 3.5082 2.2166 2.4954 11 6 2.6630 0.1935 2.6260 12 8 3.8560 -0.2396 3.2827 13 6 3.7877 -1.4028 3.9824 14 6 4.9100 -1.8849 4.6395 15 6 6.2068 -1.1196 4.5777 16 8 6.1240 0.0271 5.4263 17 14 7.6019 -2.2148 5.1479 18 6 4.8368 -3.0644 5.3553 19 6 3.6484 -3.7704 5.4072 20 35 3.5530 -5.3882 6.3818 21 6 2.5293 -3.2943 4.7473 22 6 2.5967 -2.1125 4.0357 23 6 1.6773 2.1280 1.2559 24 1 -0.3634 0.6085 0.8281 25 1 -0.3633 0.4130 -0.9411 26 1 -0.3634 -1.0213 0.1129 27 1 3.9959 0.3824 0.3186 28 1 4.0376 2.1860 0.1026 29 1 1.8750 0.3414 3.3646 30 1 2.3493 -0.5627 1.9065 31 1 6.3916 -0.8001 3.5521 32 1 6.9254 0.5682 5.4356 33 1 8.8906 -1.4820 5.0615 34 1 7.3618 -2.6572 6.5450 35 1 5.7092 -3.4377 5.8710 36 1 1.6023 -3.8469 4.7894 37 1 1.7227 -1.7411 3.5211 38 1 1.7491 3.2050 1.1042 39 1 0.7471 1.8297 1.7393 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_26869_17321600.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 14:01:34 Heat of formation + Delta-G solvation = -186.775693 kcal Electronic energy + Delta-G solvation = -30098.543780 eV Core-core repulsion = 25220.579696 eV Total energy + Delta-G solvation = -4877.964084 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.022 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -51.25069 -48.79299 -48.72249 -41.83238 -41.05175 -38.74013 -37.71444 -37.00777 -33.30135 -32.65057 -30.82456 -29.58422 -28.18221 -27.34770 -26.85017 -26.69144 -23.98241 -22.89485 -22.38126 -20.55151 -19.85317 -19.55420 -19.28173 -19.10274 -18.56957 -17.53913 -17.31297 -16.86228 -16.77077 -16.46452 -15.94567 -15.85550 -15.64960 -15.59636 -15.48016 -15.17467 -15.17135 -15.03728 -14.91068 -14.84736 -14.46160 -14.12885 -14.04566 -13.93503 -13.53295 -13.23025 -13.15145 -12.88547 -12.74271 -12.49805 -12.21135 -12.00332 -11.91087 -11.78757 -11.57855 -11.32105 -11.27368 -10.77183 -10.45736 -10.18073 -9.20474 -4.96525 0.02918 0.05570 0.62916 1.25646 1.54210 1.54811 1.88571 1.97083 2.10427 2.37741 2.57491 2.63875 2.90515 3.31351 3.32237 3.37875 3.49233 3.62593 3.68909 3.82052 4.02537 4.04763 4.22100 4.25469 4.27782 4.32732 4.40099 4.44365 4.49031 4.52159 4.65120 4.68638 4.71274 4.82211 4.84701 4.93039 5.03838 5.06467 5.11369 5.44786 5.72673 6.26238 6.60814 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.000 4.000 2 O -0.344 6.344 3 C 0.038 3.962 4 C 0.432 3.568 5 F -0.186 7.186 6 F -0.177 7.177 7 F -0.188 7.188 8 C -0.112 4.112 9 C -0.092 4.092 10 H 0.110 0.890 11 C 0.063 3.937 12 O -0.308 6.308 13 C 0.164 3.836 14 C -0.117 4.117 15 C -0.067 4.067 16 O -0.552 6.552 17 Si 0.748 3.252 18 C -0.060 4.060 19 C -0.138 4.138 20 Br -0.050 7.050 21 C -0.043 4.043 22 C -0.202 4.202 23 C -0.136 4.136 24 H 0.071 0.929 25 H 0.047 0.953 26 H 0.114 0.886 27 H 0.093 0.907 28 H 0.121 0.879 29 H 0.079 0.921 30 H 0.087 0.913 31 H 0.090 0.910 32 H 0.393 0.607 33 H -0.278 1.278 34 H -0.291 1.291 35 H 0.143 0.857 36 H 0.155 0.845 37 H 0.161 0.839 38 H 0.122 0.878 39 H 0.108 0.892 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.523 0.741 -1.005 1.969 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.095 4.095 2 O -0.262 6.262 3 C -0.005 4.005 4 C 0.378 3.622 5 F -0.167 7.167 6 F -0.159 7.159 7 F -0.170 7.170 8 C -0.149 4.149 9 C -0.110 4.110 10 H 0.128 0.872 11 C -0.011 4.011 12 O -0.220 6.220 13 C 0.117 3.883 14 C -0.119 4.119 15 C -0.176 4.176 16 O -0.361 6.361 17 Si 0.653 3.347 18 C -0.079 4.079 19 C -0.217 4.217 20 Br 0.035 6.965 21 C -0.063 4.063 22 C -0.221 4.221 23 C -0.173 4.173 24 H 0.090 0.910 25 H 0.065 0.935 26 H 0.132 0.868 27 H 0.112 0.888 28 H 0.139 0.861 29 H 0.097 0.903 30 H 0.105 0.895 31 H 0.108 0.892 32 H 0.243 0.757 33 H -0.205 1.205 34 H -0.218 1.218 35 H 0.161 0.839 36 H 0.173 0.827 37 H 0.178 0.822 38 H 0.140 0.860 39 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges -1.256 -0.230 -0.047 1.277 hybrid contribution -0.330 1.769 -0.391 1.842 sum -1.585 1.539 -0.438 2.253 Atomic orbital electron populations 1.23365 0.78684 1.05409 1.02040 1.88070 1.22129 1.22214 1.93802 1.24139 1.00832 0.86511 0.88990 1.21598 0.73818 0.78445 0.88371 1.93164 1.32617 1.94402 1.96543 1.93176 1.78860 1.47122 1.96707 1.93186 1.89153 1.74949 1.59668 1.23289 0.90895 1.05658 0.95049 1.21994 0.97716 0.96284 0.95025 0.87172 1.22963 0.85635 0.96407 0.96132 1.86081 1.37734 1.35733 1.62499 1.18951 0.93353 0.85473 0.90511 1.18703 0.94627 0.96354 1.02219 1.24694 1.01775 0.92813 0.98343 1.86560 1.43020 1.38507 1.68054 0.94273 0.73925 0.84443 0.82106 1.20972 0.97397 0.93429 0.96094 1.21671 0.97315 0.96570 1.06164 1.96752 1.98929 1.27958 1.72849 1.21202 0.97658 0.94735 0.92673 1.21521 0.98143 0.97258 1.05170 1.23653 1.00066 1.01367 0.92229 0.91033 0.93468 0.86795 0.88838 0.86082 0.90251 0.89452 0.89231 0.75699 1.20463 1.21820 0.83944 0.82705 0.82164 0.85980 0.87367 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 0.00 10.28 113.37 1.17 1.16 16 2 O -0.34 0.70 8.52 -148.98 -1.27 -0.57 16 3 C 0.04 -0.12 0.79 -10.26 -0.01 -0.12 16 4 C 0.43 0.48 2.66 71.98 0.19 0.67 16 5 F -0.19 -0.35 14.94 44.97 0.67 0.32 16 6 F -0.18 -0.21 15.72 44.97 0.71 0.50 16 7 F -0.19 -0.99 17.26 44.97 0.78 -0.21 16 8 C -0.11 0.49 6.92 31.12 0.22 0.71 16 9 C -0.09 0.55 4.19 -10.27 -0.04 0.51 16 10 H 0.11 -0.69 8.14 -2.38 -0.02 -0.71 16 11 C 0.06 -0.27 4.33 71.98 0.31 0.04 16 12 O -0.31 -0.36 9.47 -92.65 -0.88 -1.23 16 13 C 0.16 0.40 6.66 22.50 0.15 0.55 16 14 C -0.12 -0.41 5.30 -19.77 -0.10 -0.52 16 15 C -0.07 -0.08 2.37 71.24 0.17 0.09 16 16 O -0.55 -1.85 12.86 -148.98 -1.92 -3.77 16 17 Si 0.75 -0.36 30.21 68.60 2.07 1.71 16 18 C -0.06 -0.21 8.39 22.27 0.19 -0.02 16 19 C -0.14 -0.39 6.22 22.32 0.14 -0.26 16 20 Br -0.05 -0.15 33.70 -20.37 -0.69 -0.83 16 21 C -0.04 0.00 9.78 22.27 0.22 0.22 16 22 C -0.20 0.16 9.04 22.36 0.20 0.36 16 23 C -0.14 1.00 6.62 31.12 0.21 1.21 16 24 H 0.07 -0.65 6.39 -2.39 -0.02 -0.67 16 25 H 0.05 -0.15 6.32 -2.38 -0.02 -0.16 16 26 H 0.11 -0.97 8.14 -2.39 -0.02 -0.99 16 27 H 0.09 -0.28 8.10 -2.38 -0.02 -0.30 16 28 H 0.12 -0.72 7.30 -2.39 -0.02 -0.73 16 29 H 0.08 -0.52 7.66 -2.38 -0.02 -0.54 16 30 H 0.09 -0.38 5.65 -2.39 -0.01 -0.40 16 31 H 0.09 -0.12 7.83 -2.39 -0.02 -0.14 16 32 H 0.39 -1.80 8.74 -74.05 -0.65 -2.45 16 33 H -0.28 -0.79 7.11 99.48 0.71 -0.09 16 34 H -0.29 -1.72 6.74 99.48 0.67 -1.05 16 35 H 0.14 0.35 4.90 -2.91 -0.01 0.33 16 36 H 0.16 -0.62 8.06 -2.91 -0.02 -0.64 16 37 H 0.16 -0.94 6.30 -2.91 -0.02 -0.95 16 38 H 0.12 -1.06 7.69 -2.38 -0.02 -1.08 16 39 H 0.11 -1.08 6.48 -2.39 -0.02 -1.09 16 Total: 0.00 -14.08 347.78 2.96 -11.12 By element: Atomic # 1 Polarization: -12.12 SS G_CDS: 0.48 Total: -11.64 kcal Atomic # 6 Polarization: 1.60 SS G_CDS: 3.00 Total: 4.60 kcal Atomic # 8 Polarization: -1.51 SS G_CDS: -4.06 Total: -5.57 kcal Atomic # 9 Polarization: -1.55 SS G_CDS: 2.15 Total: 0.60 kcal Atomic # 14 Polarization: -0.36 SS G_CDS: 2.07 Total: 1.71 kcal Atomic # 35 Polarization: -0.15 SS G_CDS: -0.69 Total: -0.83 kcal Total: -14.08 2.96 -11.12 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_26869_17321600.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -175.654 kcal (2) G-P(sol) polarization free energy of solvation -14.083 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -189.736 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.961 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -11.122 kcal (6) G-S(sol) free energy of system = (1) + (5) -186.776 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds