Wall clock time and date at job start Mon Mar 8 2021 16:04:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.52997 * 109.47078 * 2 1 4 4 O 1.42903 * 109.46765 * 179.97438 * 3 2 1 5 5 C 1.35899 * 117.00018 * 180.02562 * 4 3 2 6 6 C 1.38607 * 120.02933 * 179.97438 * 5 4 3 7 7 C 1.38661 * 119.89089 * 179.69496 * 6 5 4 8 8 O 1.35897 * 120.02763 * 180.25693 * 7 6 5 9 9 C 1.42901 * 116.99944 * 359.97438 * 8 7 6 10 10 C 1.53000 * 109.46816 * 180.02562 * 9 8 7 11 11 H 1.09000 * 112.85365 * 316.19724 * 10 9 8 12 12 C 1.53784 * 113.61516 * 87.50848 * 10 9 8 13 13 C 1.53773 * 87.08173 * 139.97810 * 12 10 9 14 14 H 1.08999 * 113.61932 * 89.11248 * 13 12 10 15 15 O 1.42903 * 113.68920 * 220.00759 * 13 12 10 16 16 C 1.53784 * 87.08441 * 334.56465 * 13 12 10 17 17 C 1.38749 * 119.94317 * 0.28018 * 7 6 5 18 18 C 1.50703 * 119.97330 * 179.97438 * 17 7 6 19 19 O 1.42901 * 109.46927 * 285.00392 * 18 17 7 20 20 Si 1.86294 * 109.47316 * 164.99877 * 18 17 7 21 21 C 1.38201 * 120.05677 * 359.97438 * 17 7 6 22 22 C 1.38157 * 120.10718 * 359.97438 * 21 17 7 23 23 H 1.08996 * 109.47318 * 299.99893 * 1 2 3 24 24 H 1.09001 * 109.46853 * 59.99907 * 1 2 3 25 25 H 1.08998 * 109.47414 * 179.97438 * 1 2 3 26 26 H 1.09004 * 109.46703 * 240.00128 * 2 1 3 27 27 H 1.09001 * 109.46853 * 120.00093 * 2 1 3 28 28 H 1.09004 * 109.47249 * 60.00463 * 3 2 1 29 29 H 1.08993 * 109.47505 * 300.00068 * 3 2 1 30 30 H 1.08002 * 120.05734 * 359.97438 * 6 5 4 31 31 H 1.08998 * 109.47241 * 300.00352 * 9 8 7 32 32 H 1.09007 * 109.46934 * 60.00240 * 9 8 7 33 33 H 1.09000 * 113.60938 * 254.53094 * 12 10 9 34 34 H 1.08995 * 113.61040 * 25.42545 * 12 10 9 35 35 H 0.96703 * 113.99912 * 277.53230 * 15 13 12 36 36 H 1.08999 * 113.61473 * 270.88645 * 16 13 12 37 37 H 1.09002 * 113.61313 * 139.98002 * 16 13 12 38 38 H 1.09002 * 109.46719 * 44.99939 * 18 17 7 39 39 H 0.96703 * 113.99732 * 299.99626 * 19 18 17 40 40 H 1.48503 * 109.99863 * 58.68426 * 20 18 17 41 41 H 1.48497 * 110.00055 * 179.97438 * 20 18 17 42 42 H 1.08001 * 119.94327 * 180.02562 * 21 17 7 43 43 H 1.07998 * 119.96795 * 180.02562 * 22 21 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 8 3.4690 1.4424 0.0006 5 6 4.0861 2.6532 0.0012 6 6 5.4702 2.7264 0.0024 7 6 6.0968 3.9633 -0.0034 8 8 7.4537 4.0383 -0.0076 9 6 8.1717 2.8028 -0.0051 10 6 9.6751 3.0866 -0.0099 11 1 9.9548 3.8752 -0.7085 12 6 10.2726 3.2659 1.3958 13 6 11.4868 2.4656 0.8961 14 1 12.2628 3.0849 0.4460 15 8 12.0017 1.5429 1.8582 16 6 10.5405 1.8211 -0.1305 17 6 5.3372 5.1245 -0.0044 18 6 6.0175 6.4692 -0.0101 19 8 6.5475 6.7403 1.2890 20 14 4.7828 7.7879 -0.4648 21 6 3.9573 5.0489 -0.0002 22 6 3.3307 3.8176 0.0045 23 1 -0.3634 0.5138 0.8899 24 1 -0.3633 0.5139 -0.8900 25 1 -0.3634 -1.0276 -0.0005 26 1 1.8933 -0.5138 -0.8900 27 1 1.8933 -0.5139 0.8900 28 1 1.6767 1.9563 0.8900 29 1 1.6767 1.9563 -0.8899 30 1 6.0597 1.8215 0.0032 31 1 7.9125 2.2337 0.8876 32 1 7.9074 2.2272 -0.8924 33 1 10.5041 4.3020 1.6428 34 1 9.7076 2.7593 2.1782 35 1 12.5976 1.9424 2.5066 36 1 10.0489 0.9195 0.2347 37 1 10.9885 1.6908 -1.1157 38 1 6.8279 6.4633 -0.7391 39 1 5.8810 6.7607 1.9893 40 1 3.6568 7.7850 0.5035 41 1 5.4412 9.1189 -0.4733 42 1 3.3678 5.9539 -0.0015 43 1 2.2522 3.7612 0.0073 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_26953_11354858.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 16:04:00 Heat of formation + Delta-G solvation = -110.459218 kcal Electronic energy + Delta-G solvation = -23935.688911 eV Core-core repulsion = 20334.994276 eV Total energy + Delta-G solvation = -3600.694634 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.155 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -41.69573 -40.60558 -39.81096 -38.29341 -37.06165 -35.98858 -34.93726 -31.96771 -31.26521 -29.20927 -27.78555 -26.76416 -26.02244 -24.46009 -23.26436 -22.34889 -22.05134 -20.63876 -19.75178 -18.62176 -18.22183 -17.53200 -17.38217 -17.28185 -16.94619 -16.45965 -16.33427 -15.88539 -15.78508 -15.16584 -15.11616 -15.05383 -14.56784 -14.44712 -13.91294 -13.74664 -13.48921 -13.47945 -13.31749 -13.00937 -12.69208 -12.65154 -12.54866 -12.33005 -12.11247 -12.03272 -11.87250 -11.74795 -11.53292 -11.50090 -11.22676 -10.77216 -10.41394 -9.60332 -9.00837 -4.91529 0.27394 0.40916 1.36430 1.60728 1.98828 2.00601 2.21211 2.64749 3.21494 3.43057 3.53579 3.54885 3.66908 3.75728 3.81166 3.83949 3.87770 3.89028 4.04833 4.11507 4.15856 4.19285 4.23707 4.31291 4.37014 4.40071 4.47881 4.56667 4.61679 4.68323 4.73945 4.74921 4.76285 4.95223 4.95891 5.01264 5.08170 5.09294 5.16708 5.30397 5.32400 5.34985 5.56824 6.28593 6.45952 6.56406 6.68272 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.124 4.124 3 C 0.057 3.943 4 O -0.314 6.314 5 C 0.178 3.822 6 C -0.247 4.247 7 C 0.197 3.803 8 O -0.295 6.295 9 C 0.068 3.932 10 C -0.108 4.108 11 H 0.106 0.894 12 C -0.162 4.162 13 C 0.076 3.924 14 H 0.085 0.915 15 O -0.560 6.560 16 C -0.120 4.120 17 C -0.189 4.189 18 C -0.056 4.056 19 O -0.525 6.525 20 Si 0.685 3.315 21 C -0.044 4.044 22 C -0.243 4.243 23 H 0.058 0.942 24 H 0.059 0.941 25 H 0.066 0.934 26 H 0.074 0.926 27 H 0.074 0.926 28 H 0.064 0.936 29 H 0.066 0.934 30 H 0.138 0.862 31 H 0.066 0.934 32 H 0.068 0.932 33 H 0.074 0.926 34 H 0.090 0.910 35 H 0.380 0.620 36 H 0.093 0.907 37 H 0.080 0.920 38 H 0.115 0.885 39 H 0.371 0.629 40 H -0.261 1.261 41 H -0.257 1.257 42 H 0.136 0.864 43 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.404 -0.651 -1.782 3.062 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.162 4.162 3 C -0.018 4.018 4 O -0.227 6.227 5 C 0.132 3.868 6 C -0.267 4.267 7 C 0.150 3.850 8 O -0.208 6.208 9 C -0.007 4.007 10 C -0.126 4.126 11 H 0.124 0.876 12 C -0.200 4.200 13 C 0.017 3.983 14 H 0.102 0.898 15 O -0.366 6.366 16 C -0.158 4.158 17 C -0.190 4.190 18 C -0.166 4.166 19 O -0.331 6.331 20 Si 0.587 3.413 21 C -0.061 4.061 22 C -0.262 4.262 23 H 0.077 0.923 24 H 0.078 0.922 25 H 0.085 0.915 26 H 0.093 0.907 27 H 0.093 0.907 28 H 0.083 0.917 29 H 0.084 0.916 30 H 0.155 0.845 31 H 0.085 0.915 32 H 0.086 0.914 33 H 0.093 0.907 34 H 0.108 0.892 35 H 0.228 0.772 36 H 0.112 0.888 37 H 0.099 0.901 38 H 0.133 0.867 39 H 0.218 0.782 40 H -0.186 1.186 41 H -0.183 1.183 42 H 0.154 0.846 43 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -2.401 -0.351 -2.216 3.286 hybrid contribution 0.123 0.012 1.505 1.510 sum -2.278 -0.339 -0.711 2.411 Atomic orbital electron populations 1.21698 0.93951 1.02847 1.02325 1.21503 0.96273 0.94536 1.03887 1.22973 0.77770 0.99243 1.01789 1.86063 1.21878 1.26854 1.87883 1.18663 0.91426 0.84252 0.92432 1.20437 0.92797 0.97641 1.15797 1.18372 0.82608 0.92100 0.91901 1.86170 1.14563 1.32616 1.87428 1.22882 0.90968 0.84994 1.01840 1.22308 0.91663 0.99505 0.99126 0.87587 1.23757 0.97963 1.01453 0.96810 1.23299 0.93566 0.91103 0.90377 0.89762 1.86521 1.67302 1.37991 1.44797 1.23072 0.96004 0.97468 0.99207 1.19474 0.92762 0.94306 1.12495 1.24761 1.05726 0.97920 0.88189 1.86641 1.37223 1.92775 1.16454 0.95120 0.77803 0.78000 0.90421 1.20756 0.92792 0.97757 0.94833 1.21090 1.00306 0.91816 1.12955 0.92283 0.92228 0.91497 0.90684 0.90749 0.91749 0.91584 0.84472 0.91539 0.91419 0.90700 0.89152 0.77215 0.88828 0.90105 0.86688 0.78222 1.18628 1.18252 0.84644 0.84982 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.34 9.91 37.16 0.37 0.71 16 2 C -0.12 0.15 6.30 -26.73 -0.17 -0.02 16 3 C 0.06 -0.03 4.74 37.16 0.18 0.15 16 4 O -0.31 -0.70 10.13 -19.42 -0.20 -0.90 16 5 C 0.18 0.41 6.68 -39.24 -0.26 0.15 16 6 C -0.25 -0.61 8.97 -39.29 -0.35 -0.96 16 7 C 0.20 0.53 6.66 -39.24 -0.26 0.27 16 8 O -0.30 -0.81 9.46 -19.42 -0.18 -0.99 16 9 C 0.07 0.04 4.58 37.16 0.17 0.21 16 10 C -0.11 0.02 4.01 -89.80 -0.36 -0.34 16 11 H 0.11 -0.04 8.14 -51.93 -0.42 -0.46 16 12 C -0.16 -0.04 7.47 -25.92 -0.19 -0.23 16 13 C 0.08 -0.01 5.21 -25.92 -0.14 -0.14 16 14 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 15 O -0.56 -0.65 13.67 -35.23 -0.48 -1.13 16 16 C -0.12 0.04 7.47 -25.91 -0.19 -0.15 16 17 C -0.19 -0.34 5.27 -104.45 -0.55 -0.89 16 18 C -0.06 -0.08 2.37 36.01 0.09 0.01 16 19 O -0.53 -1.50 12.88 -35.23 -0.45 -1.95 16 20 Si 0.68 -0.14 30.24 -169.99 -5.14 -5.28 16 21 C -0.04 -0.03 8.65 -39.62 -0.34 -0.37 16 22 C -0.24 -0.23 9.04 -39.40 -0.36 -0.59 16 23 H 0.06 -0.14 8.14 -51.93 -0.42 -0.57 16 24 H 0.06 -0.15 8.14 -51.93 -0.42 -0.57 16 25 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 26 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 27 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 28 H 0.06 -0.08 7.65 -51.93 -0.40 -0.48 16 29 H 0.07 -0.10 7.67 -51.93 -0.40 -0.50 16 30 H 0.14 0.21 6.30 -52.49 -0.33 -0.12 16 31 H 0.07 0.03 7.36 -51.93 -0.38 -0.35 16 32 H 0.07 -0.03 7.66 -51.92 -0.40 -0.42 16 33 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 34 H 0.09 0.09 7.89 -51.93 -0.41 -0.32 16 35 H 0.38 -1.07 9.12 45.56 0.42 -0.65 16 36 H 0.09 0.01 8.10 -51.93 -0.42 -0.41 16 37 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 38 H 0.12 0.17 7.82 -51.93 -0.41 -0.23 16 39 H 0.37 -0.04 8.70 45.56 0.40 0.36 16 40 H -0.26 -0.28 6.68 56.52 0.38 0.10 16 41 H -0.26 -0.78 7.11 56.52 0.40 -0.38 16 42 H 0.14 -0.14 4.85 -52.49 -0.25 -0.40 16 43 H 0.13 -0.13 6.29 -52.49 -0.33 -0.46 16 LS Contribution 350.22 15.07 5.28 5.28 Total: 0.00 -6.55 350.22 -9.50 -16.05 By element: Atomic # 1 Polarization: -2.93 SS G_CDS: -5.94 Total: -8.88 kcal Atomic # 6 Polarization: 0.17 SS G_CDS: -2.38 Total: -2.20 kcal Atomic # 8 Polarization: -3.65 SS G_CDS: -1.32 Total: -4.97 kcal Atomic # 14 Polarization: -0.14 SS G_CDS: -5.14 Total: -5.28 kcal Total LS contribution 5.28 Total: 5.28 kcal Total: -6.55 -9.50 -16.05 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_26953_11354858.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.410 kcal (2) G-P(sol) polarization free energy of solvation -6.551 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -100.961 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.498 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.049 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.459 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds