Wall clock time and date at job start Mon Mar 8 2021 16:58:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50694 * 109.47118 * 120.00721 * 2 1 3 5 5 C 1.38239 * 119.94726 * 64.72722 * 4 2 1 6 6 C 1.38170 * 120.05299 * 179.72660 * 5 4 2 7 7 N 1.48006 * 120.02217 * 180.27346 * 6 5 4 8 8 O 1.21796 * 120.00501 * 0.26859 * 7 6 5 9 9 O 1.21807 * 119.99592 * 180.27170 * 7 6 5 10 10 C 1.38709 * 119.94701 * 0.54205 * 6 5 4 11 11 O 1.35895 * 120.05636 * 179.70967 * 10 6 5 12 12 C 1.42900 * 117.00006 * 180.02562 * 11 10 6 13 13 C 1.52998 * 109.47113 * 179.97438 * 12 11 10 14 14 H 1.08997 * 109.46722 * 180.02562 * 13 12 11 15 15 O 1.42969 * 109.46929 * 299.99710 * 13 12 11 16 16 C 1.43096 * 113.76843 * 178.79902 * 15 13 12 17 17 C 1.53261 * 108.93885 * 302.02998 * 16 15 13 18 18 H 1.09002 * 109.57338 * 294.71123 * 17 16 15 19 19 N 1.46500 * 109.57398 * 174.33671 * 17 16 15 20 20 C 1.34522 * 124.45746 * 300.33620 * 19 17 16 21 21 O 1.21449 * 125.70938 * 0.03076 * 20 19 17 22 22 C 1.47818 * 108.58145 * 179.90632 * 20 19 17 23 23 C 1.40949 * 105.87868 * 0.34793 * 22 20 19 24 24 C 1.38561 * 119.82349 * 179.79674 * 23 22 20 25 25 C 1.38620 * 119.71834 * 359.97438 * 24 23 22 26 26 C 1.38229 * 120.45793 * 359.97438 * 25 24 23 27 27 C 1.38560 * 134.30030 * 180.09588 * 22 20 19 28 28 C 1.34521 * 124.46323 * 120.63593 * 19 17 16 29 29 O 1.21454 * 125.71029 * 359.96493 * 28 19 17 30 30 C 1.53260 * 108.84799 * 54.52498 * 17 16 15 31 31 O 1.42956 * 109.47261 * 59.99819 * 13 12 11 32 32 C 1.38753 * 119.88467 * 359.72911 * 10 6 5 33 33 C 1.38121 * 119.94617 * 359.97438 * 32 10 6 34 34 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 35 35 H 1.09004 * 109.46690 * 240.00803 * 2 1 3 36 36 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 37 37 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 38 38 H 1.08007 * 119.97243 * 359.97330 * 5 4 2 39 39 H 1.09000 * 109.46785 * 300.00003 * 12 11 10 40 40 H 1.09001 * 109.46932 * 59.99399 * 12 11 10 41 41 H 1.08999 * 109.55700 * 182.19180 * 16 15 13 42 42 H 1.08996 * 109.55769 * 61.86557 * 16 15 13 43 43 H 1.07997 * 120.14361 * 180.02562 * 24 23 22 44 44 H 1.07998 * 119.76956 * 179.97438 * 25 24 23 45 45 H 1.07995 * 119.77185 * 179.97438 * 26 25 24 46 46 H 1.08003 * 120.14099 * 0.25799 * 27 22 20 47 47 H 1.08997 * 109.55403 * 185.63774 * 30 17 16 48 48 H 1.09000 * 109.55623 * 65.31158 * 30 17 16 49 49 H 1.07996 * 120.02777 * 180.02562 * 32 10 6 50 50 H 1.08002 * 119.96979 * 179.97438 * 33 32 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2303 5 6 1.6792 -2.0592 1.3996 6 6 2.1436 -2.7141 2.5242 7 7 1.8785 -4.1593 2.7018 8 8 1.2550 -4.7729 1.8543 9 8 2.2839 -4.7351 3.6957 10 6 2.8536 -2.0148 3.4890 11 8 3.3063 -2.6554 4.5987 12 6 4.0295 -1.8722 5.5503 13 6 4.4544 -2.7586 6.7228 14 1 5.0056 -2.1610 7.4488 15 8 3.2934 -3.3132 7.3460 16 6 3.5878 -4.1836 8.4430 17 6 4.4854 -5.3226 7.9472 18 1 3.9361 -5.9359 7.2329 19 7 4.9061 -6.1461 9.0835 20 6 5.6040 -5.6881 10.1383 21 8 5.9790 -4.5440 10.2975 22 6 5.8355 -6.8098 11.0728 23 6 5.2323 -7.9370 10.4793 24 6 5.2831 -9.1639 11.1213 25 6 5.9280 -9.2738 12.3434 26 6 6.5205 -8.1686 12.9249 27 6 6.4763 -6.9346 12.2950 28 6 4.6503 -7.4610 9.2067 29 8 4.0428 -8.1431 8.4061 30 6 5.7186 -4.7201 7.2652 31 8 5.2887 -3.8156 6.2431 32 6 3.1005 -0.6600 3.3193 33 6 2.6394 -0.0112 2.1905 34 1 -0.3934 0.4418 -0.7650 35 1 1.7923 -0.5137 -0.8901 36 1 1.5616 2.4678 1.2086 37 1 3.5346 1.7703 -0.0322 38 1 1.1222 -2.6022 0.6504 39 1 4.9144 -1.4489 5.0750 40 1 3.3931 -1.0664 5.9163 41 1 2.6606 -4.5963 8.8405 42 1 4.1046 -3.6250 9.2234 43 1 4.8230 -10.0310 10.6710 44 1 5.9677 -10.2296 12.8447 45 1 7.0196 -8.2668 13.8776 46 1 6.9405 -6.0744 12.7543 47 1 6.3152 -5.5166 6.8205 48 1 6.3161 -4.1819 8.0011 49 1 3.6534 -0.1134 4.0689 50 1 2.8310 1.0434 2.0583 There are 80 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 80 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_29190_13594088.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 16:58:13 Heat of formation + Delta-G solvation = -109.735989 kcal Electronic energy + Delta-G solvation = -43990.372515 eV Core-core repulsion = 38113.857147 eV Total energy + Delta-G solvation = -5876.515368 eV No. of doubly occupied orbitals = 80 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 443.128 amu Computer time = 1.60 seconds Orbital eigenvalues (eV) -43.64162 -42.94612 -41.64902 -41.04213 -39.79109 -39.68362 -39.36667 -37.54006 -37.10885 -37.02784 -36.96506 -34.60253 -33.45638 -32.46872 -32.34260 -31.59698 -29.90346 -27.54100 -27.38975 -26.71912 -26.31057 -25.59901 -24.70258 -23.52864 -23.24774 -22.65506 -22.24795 -20.99355 -20.27443 -19.41747 -19.18575 -19.08946 -18.94370 -18.66714 -18.57514 -18.20386 -17.99595 -17.61191 -17.55627 -17.13757 -16.78588 -16.73835 -16.52865 -16.36874 -16.04095 -16.03772 -15.93371 -15.58545 -15.38353 -15.21777 -15.12833 -14.94921 -14.65429 -14.57130 -14.43779 -14.23398 -14.07398 -13.94880 -13.55216 -13.51376 -12.94341 -12.83043 -12.82107 -12.64289 -12.50742 -12.23207 -12.15247 -12.14172 -12.06530 -11.74251 -11.69101 -11.67186 -11.51863 -10.86402 -10.84875 -10.73128 -10.56791 -10.42947 -10.39748 -9.78182 -5.18402 -1.13566 -1.05330 -0.27673 -0.23686 0.45014 0.60429 0.83807 0.95998 1.05532 1.42996 1.53078 1.70972 1.71258 2.00152 2.22993 2.26962 2.40423 2.41245 2.97413 3.09895 3.10615 3.19949 3.25805 3.34967 3.38983 3.43992 3.50434 3.58368 3.66614 3.71161 3.79404 3.82468 3.83907 3.88571 3.98332 3.99195 4.05428 4.13308 4.14260 4.19298 4.23763 4.36414 4.37255 4.49903 4.53153 4.56297 4.64559 4.73256 4.76549 4.91316 5.00178 5.01260 5.36132 5.42352 5.48100 5.59048 5.79057 5.82956 6.01738 6.43450 6.46498 7.00927 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.070 4.070 3 Si 0.690 3.310 4 C -0.115 4.115 5 C 0.012 3.988 6 C -0.077 4.077 7 N 0.032 4.968 8 O -0.179 6.179 9 O -0.121 6.121 10 C 0.204 3.796 11 O -0.256 6.256 12 C 0.066 3.934 13 C 0.248 3.752 14 H 0.089 0.911 15 O -0.367 6.367 16 C 0.050 3.950 17 C 0.074 3.926 18 H 0.135 0.865 19 N -0.570 5.570 20 C 0.576 3.424 21 O -0.462 6.462 22 C -0.143 4.143 23 C -0.139 4.139 24 C -0.042 4.042 25 C -0.092 4.092 26 C -0.094 4.094 27 C -0.042 4.042 28 C 0.574 3.426 29 O -0.448 6.448 30 C 0.050 3.950 31 O -0.367 6.367 32 C -0.209 4.209 33 C -0.030 4.030 34 H 0.387 0.613 35 H 0.082 0.918 36 H -0.248 1.248 37 H -0.251 1.251 38 H 0.164 0.836 39 H 0.096 0.904 40 H 0.096 0.904 41 H 0.110 0.890 42 H 0.074 0.926 43 H 0.145 0.855 44 H 0.145 0.855 45 H 0.145 0.855 46 H 0.144 0.856 47 H 0.110 0.890 48 H 0.074 0.926 49 H 0.155 0.845 50 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.964 5.038 2.627 6.928 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.180 4.180 3 Si 0.590 3.410 4 C -0.116 4.116 5 C -0.006 4.006 6 C -0.162 4.162 7 N 0.552 4.448 8 O -0.387 6.387 9 O -0.345 6.345 10 C 0.154 3.846 11 O -0.165 6.165 12 C -0.009 4.009 13 C 0.152 3.848 14 H 0.106 0.894 15 O -0.286 6.286 16 C -0.027 4.027 17 C -0.028 4.028 18 H 0.152 0.848 19 N -0.315 5.315 20 C 0.366 3.634 21 O -0.333 6.333 22 C -0.147 4.147 23 C -0.142 4.142 24 C -0.061 4.061 25 C -0.110 4.110 26 C -0.112 4.112 27 C -0.061 4.061 28 C 0.363 3.637 29 O -0.317 6.317 30 C -0.028 4.028 31 O -0.286 6.286 32 C -0.228 4.228 33 C -0.048 4.048 34 H 0.235 0.765 35 H 0.099 0.901 36 H -0.172 1.172 37 H -0.176 1.176 38 H 0.182 0.818 39 H 0.114 0.886 40 H 0.114 0.886 41 H 0.128 0.872 42 H 0.092 0.908 43 H 0.163 0.837 44 H 0.163 0.837 45 H 0.163 0.837 46 H 0.161 0.839 47 H 0.128 0.872 48 H 0.092 0.908 49 H 0.173 0.827 50 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 4.317 6.150 2.826 8.028 hybrid contribution 0.211 -0.769 0.576 0.984 sum 4.528 5.381 3.402 7.812 Atomic orbital electron populations 1.86500 1.16745 1.81966 1.49976 1.24633 0.86216 1.10616 0.96543 0.94751 0.80831 0.77648 0.87778 1.19198 1.02210 0.92823 0.97383 1.20789 0.92179 0.93770 0.93910 1.20549 1.12954 0.82468 1.00223 1.43265 0.98844 1.02389 1.00269 1.94547 1.39664 1.66254 1.38247 1.94650 1.52082 1.69150 1.18594 1.18675 0.89449 0.90647 0.85832 1.86573 1.66691 1.36087 1.27194 1.23159 0.96948 0.93327 0.87428 1.23491 0.82259 0.87626 0.91408 0.89382 1.88267 1.30868 1.62447 1.47055 1.23018 1.00806 0.90010 0.88914 1.22667 0.98339 0.94166 0.87626 0.84764 1.46450 1.52293 1.11339 1.21423 1.18453 0.76191 0.87814 0.80937 1.90804 1.47814 1.19170 1.75536 1.20467 1.03187 0.93822 0.97205 1.20485 1.02341 0.95618 0.95779 1.20878 0.95667 0.95789 0.93765 1.21562 0.95281 0.99830 0.94331 1.21549 0.97696 0.91754 1.00238 1.20846 0.94915 0.98615 0.91684 1.18420 0.78415 0.80870 0.85980 1.90879 1.35880 1.59131 1.45850 1.23020 0.94386 0.93916 0.91436 1.88260 1.66471 1.39803 1.34114 1.21213 1.07791 0.92321 1.01517 1.21129 0.92549 0.99606 0.91517 0.76476 0.90053 1.17229 1.17575 0.81807 0.88564 0.88561 0.87152 0.90797 0.83720 0.83703 0.83745 0.83856 0.87165 0.90802 0.82704 0.84355 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.50 12.81 -35.23 -0.45 0.05 16 2 C -0.07 0.11 2.79 36.00 0.10 0.21 16 3 Si 0.69 -2.02 29.85 -169.99 -5.07 -7.09 16 4 C -0.11 -0.12 5.39 -104.61 -0.56 -0.68 16 5 C 0.01 0.03 9.18 -39.61 -0.36 -0.33 16 6 C -0.08 -0.36 6.87 -79.80 -0.55 -0.91 16 7 N 0.03 0.25 4.45 34.03 0.15 0.40 16 8 O -0.18 -1.45 18.45 -29.46 -0.54 -1.99 16 9 O -0.12 -1.09 17.24 -36.49 -0.63 -1.72 16 10 C 0.20 0.62 6.67 -39.22 -0.26 0.36 16 11 O -0.26 -0.95 7.94 -49.95 -0.40 -1.35 16 12 C 0.07 -0.02 4.83 37.16 0.18 0.16 16 13 C 0.25 0.27 3.59 37.16 0.13 0.40 16 14 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 15 O -0.37 -1.08 10.43 -63.56 -0.66 -1.74 16 16 C 0.05 0.08 6.32 37.29 0.24 0.32 16 17 C 0.07 0.15 3.07 -67.66 -0.21 -0.06 16 18 H 0.13 0.47 7.60 -51.93 -0.39 0.07 16 19 N -0.57 -0.98 2.53 -110.22 -0.28 -1.26 16 20 C 0.58 0.89 7.35 -12.46 -0.09 0.80 16 21 O -0.46 -1.37 15.16 5.41 0.08 -1.29 16 22 C -0.14 -0.02 6.40 -104.83 -0.67 -0.69 16 23 C -0.14 -0.07 6.40 -104.83 -0.67 -0.74 16 24 C -0.04 0.07 10.09 -39.32 -0.40 -0.33 16 25 C -0.09 0.32 10.04 -39.44 -0.40 -0.08 16 26 C -0.09 0.34 10.04 -39.44 -0.40 -0.06 16 27 C -0.04 0.08 10.09 -39.32 -0.40 -0.31 16 28 C 0.57 1.45 8.02 -12.46 -0.10 1.35 16 29 O -0.45 -2.40 17.44 5.41 0.09 -2.31 16 30 C 0.05 0.08 6.32 37.29 0.24 0.31 16 31 O -0.37 -1.05 10.43 -63.56 -0.66 -1.71 16 32 C -0.21 -0.01 9.04 -39.43 -0.36 -0.36 16 33 C -0.03 0.00 8.66 -39.61 -0.34 -0.35 16 34 H 0.39 -2.30 8.74 45.56 0.40 -1.90 16 35 H 0.08 -0.26 7.96 -51.93 -0.41 -0.67 16 36 H -0.25 0.05 7.05 56.52 0.40 0.45 16 37 H -0.25 0.20 7.11 56.52 0.40 0.60 16 38 H 0.16 0.32 7.61 -52.48 -0.40 -0.08 16 39 H 0.10 -0.26 7.66 -51.93 -0.40 -0.66 16 40 H 0.10 -0.25 7.66 -51.93 -0.40 -0.65 16 41 H 0.11 0.11 8.14 -51.93 -0.42 -0.31 16 42 H 0.07 0.09 6.67 -51.93 -0.35 -0.26 16 43 H 0.15 -0.40 8.06 -52.49 -0.42 -0.82 16 44 H 0.15 -0.84 8.06 -52.49 -0.42 -1.27 16 45 H 0.14 -0.86 8.06 -52.49 -0.42 -1.29 16 46 H 0.14 -0.48 8.06 -52.48 -0.42 -0.91 16 47 H 0.11 0.10 8.14 -51.93 -0.42 -0.32 16 48 H 0.07 0.08 6.67 -51.93 -0.35 -0.26 16 49 H 0.16 -0.51 6.30 -52.49 -0.33 -0.84 16 50 H 0.14 -0.20 4.86 -52.49 -0.26 -0.45 16 LS Contribution 430.46 15.07 6.49 6.49 Total: 0.00 -12.84 430.46 -11.81 -24.65 By element: Atomic # 1 Polarization: -5.07 SS G_CDS: -5.04 Total: -10.11 kcal Atomic # 6 Polarization: 3.88 SS G_CDS: -4.88 Total: -1.00 kcal Atomic # 7 Polarization: -0.74 SS G_CDS: -0.13 Total: -0.86 kcal Atomic # 8 Polarization: -8.90 SS G_CDS: -3.17 Total: -12.07 kcal Atomic # 14 Polarization: -2.02 SS G_CDS: -5.07 Total: -7.09 kcal Total LS contribution 6.49 Total: 6.49 kcal Total: -12.84 -11.81 -24.65 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_29190_13594088.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -85.086 kcal (2) G-P(sol) polarization free energy of solvation -12.843 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -97.929 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.807 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.650 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.736 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.60 seconds