Wall clock time and date at job start Mon Mar 8 2021 17:30:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 C 1.53010 * 109.47419 * 2 1 4 4 C 1.52998 * 109.47299 * 240.00084 * 2 1 3 5 5 O 1.42898 * 109.47340 * 119.99835 * 2 1 3 6 6 C 1.42902 * 113.99885 * 59.99831 * 5 2 1 7 7 H 1.08992 * 112.84940 * 18.80900 * 6 5 2 8 8 C 1.53782 * 113.61325 * 150.00568 * 6 5 2 9 9 C 1.53778 * 87.08154 * 140.06516 * 8 6 5 10 10 H 1.09000 * 113.61299 * 89.19416 * 9 8 6 11 11 C 1.52998 * 113.61339 * 220.01696 * 9 8 6 12 12 O 1.42906 * 109.46786 * 184.99904 * 11 9 8 13 13 C 1.35902 * 116.99413 * 179.97438 * 12 11 9 14 14 C 1.38718 * 120.05031 * 180.02562 * 13 12 11 15 15 N 1.47992 * 120.02923 * 0.03972 * 14 13 12 16 16 O 1.21805 * 120.00291 * 179.97438 * 15 14 13 17 17 O 1.21800 * 120.00183 * 359.97438 * 15 14 13 18 18 C 1.38168 * 119.93995 * 180.02562 * 14 13 12 19 19 C 1.38241 * 120.05975 * 0.02562 * 18 14 13 20 20 C 1.50699 * 119.94709 * 179.97438 * 19 18 14 21 21 O 1.42892 * 109.47249 * 299.99987 * 20 19 18 22 22 Si 1.86298 * 109.47032 * 179.97438 * 20 19 18 23 23 C 1.38287 * 120.10758 * 0.26718 * 19 18 14 24 24 C 1.38127 * 120.06001 * 359.45857 * 23 19 18 25 25 C 1.53784 * 113.68946 * 247.54027 * 6 5 2 26 26 H 1.08996 * 109.47438 * 300.00560 * 1 2 3 27 27 H 1.09007 * 109.46753 * 60.00069 * 1 2 3 28 28 H 1.08998 * 109.47273 * 179.97438 * 1 2 3 29 29 H 1.08991 * 109.47257 * 180.02562 * 3 2 1 30 30 H 1.09005 * 109.46461 * 300.00101 * 3 2 1 31 31 H 1.08992 * 109.46805 * 59.99489 * 3 2 1 32 32 H 1.09005 * 109.47219 * 299.99566 * 4 2 1 33 33 H 1.08994 * 109.47326 * 59.99910 * 4 2 1 34 34 H 1.09002 * 109.47021 * 180.02562 * 4 2 1 35 35 H 1.08994 * 113.61643 * 25.51354 * 8 6 5 36 36 H 1.08997 * 113.61105 * 254.61677 * 8 6 5 37 37 H 1.08999 * 109.47498 * 65.00260 * 11 9 8 38 38 H 1.08999 * 109.47218 * 304.99918 * 11 9 8 39 39 H 1.08005 * 119.97045 * 179.97438 * 18 14 13 40 40 H 1.09004 * 109.46453 * 60.00055 * 20 19 18 41 41 H 0.96703 * 114.00176 * 299.99748 * 21 20 19 42 42 H 1.48506 * 109.99834 * 58.68765 * 22 20 19 43 43 H 1.48502 * 110.00011 * 180.02562 * 22 20 19 44 44 H 1.08008 * 119.97168 * 179.70893 * 23 19 18 45 45 H 1.07999 * 120.03135 * 180.25247 * 24 23 19 46 46 H 1.09000 * 113.61517 * 105.46082 * 25 6 5 47 47 H 1.08994 * 113.61396 * 334.55256 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0401 1.4426 0.0000 4 6 2.0400 -0.7212 -1.2492 5 8 2.0063 -0.6736 1.1668 6 6 1.5846 -2.0355 1.2645 7 1 1.2523 -2.4451 0.3108 8 6 2.5836 -2.9378 2.0080 9 6 1.3666 -3.6133 2.6616 10 1 0.9755 -4.4552 2.0903 11 6 1.5700 -3.9428 4.1417 12 8 0.4387 -4.6678 4.6281 13 6 0.4602 -5.0407 5.9348 14 6 -0.6051 -5.7476 6.4731 15 7 -1.7661 -6.0975 5.6247 16 8 -2.7010 -6.7186 6.0978 17 8 -1.7868 -5.7643 4.4534 18 6 -0.5810 -6.1250 7.8020 19 6 0.5031 -5.7984 8.5952 20 6 0.5264 -6.2108 10.0444 21 8 -0.5873 -5.6276 10.7236 22 14 2.1104 -5.6254 10.8313 23 6 1.5635 -5.0884 8.0624 24 6 1.5470 -4.7136 6.7330 25 6 0.6067 -2.2979 2.4220 26 1 -0.3634 0.5139 0.8899 27 1 -0.3633 0.5139 -0.8901 28 1 -0.3634 -1.0276 -0.0005 29 1 3.1300 1.4425 -0.0005 30 1 1.6767 1.9563 -0.8900 31 1 1.6767 1.9564 0.8899 32 1 1.6767 -1.7490 -1.2492 33 1 1.6767 -0.2074 -2.1392 34 1 3.1300 -0.7216 -1.2489 35 1 3.2161 -2.3999 2.7142 36 1 3.1487 -3.5982 1.3502 37 1 1.6797 -3.0180 4.7081 38 1 2.4680 -4.5493 4.2589 39 1 -1.4103 -6.6751 8.2218 40 1 0.4663 -7.2970 10.1140 41 1 -0.5988 -4.6609 10.7023 42 1 2.2200 -4.1490 10.7147 43 1 2.1459 -6.0265 12.2607 44 1 2.4073 -4.8303 8.6853 45 1 2.3772 -4.1627 6.3164 46 1 -0.4242 -2.4419 2.0985 47 1 0.6987 -1.5851 3.2414 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_29190_14598384.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 17:30:17 Heat of formation + Delta-G solvation = -64.927681 kcal Electronic energy + Delta-G solvation = -29693.583607 eV Core-core repulsion = 25426.991506 eV Total energy + Delta-G solvation = -4266.592101 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.165 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -43.03872 -41.66345 -40.90824 -39.71702 -38.34237 -37.54718 -37.17371 -33.98960 -33.40985 -32.30642 -29.83888 -28.43402 -28.37843 -27.61394 -26.80646 -26.60422 -24.69177 -23.20448 -22.73035 -20.93230 -20.84458 -20.17584 -19.47895 -19.15839 -18.38277 -18.34783 -17.87792 -17.35398 -17.23601 -16.62503 -16.53776 -16.36508 -15.97650 -15.79680 -15.66986 -15.01838 -14.75924 -14.59746 -14.43216 -13.99047 -13.81924 -13.58498 -13.53684 -13.37878 -13.15114 -13.07101 -12.85616 -12.70748 -12.66991 -12.52155 -12.31226 -12.26601 -12.08804 -11.99128 -11.85813 -11.81875 -11.80076 -11.47064 -11.28068 -10.94278 -10.86125 -10.40207 -9.83520 -5.19829 -1.11776 -0.31905 0.36997 0.52232 1.03186 1.35558 1.55908 1.77159 1.97448 2.65450 3.00672 3.11139 3.18169 3.27262 3.33595 3.46064 3.56917 3.61533 3.66967 3.76578 3.84572 3.90236 3.95966 4.02192 4.04837 4.08893 4.22254 4.23257 4.36391 4.40703 4.51447 4.53309 4.60112 4.66760 4.68036 4.71863 4.72784 4.76270 4.84325 4.87410 4.95721 4.97874 5.05114 5.08412 5.23127 5.26811 5.30882 5.50285 5.81720 6.17082 6.35797 6.89432 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C 0.105 3.895 3 C -0.139 4.139 4 C -0.179 4.179 5 O -0.362 6.362 6 C 0.062 3.938 7 H 0.094 0.906 8 C -0.126 4.126 9 C -0.109 4.109 10 H 0.110 0.890 11 C 0.063 3.937 12 O -0.275 6.275 13 C 0.205 3.795 14 C -0.082 4.082 15 N 0.035 4.965 16 O -0.177 6.177 17 O -0.133 6.133 18 C 0.008 3.992 19 C -0.159 4.159 20 C -0.071 4.071 21 O -0.526 6.526 22 Si 0.687 3.313 23 C -0.024 4.024 24 C -0.209 4.209 25 C -0.148 4.148 26 H 0.064 0.936 27 H 0.066 0.934 28 H 0.059 0.941 29 H 0.063 0.937 30 H 0.071 0.929 31 H 0.063 0.937 32 H 0.059 0.941 33 H 0.068 0.932 34 H 0.065 0.935 35 H 0.093 0.907 36 H 0.079 0.921 37 H 0.073 0.927 38 H 0.074 0.926 39 H 0.163 0.837 40 H 0.125 0.875 41 H 0.378 0.622 42 H -0.256 1.256 43 H -0.251 1.251 44 H 0.148 0.852 45 H 0.156 0.844 46 H 0.076 0.924 47 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.074 1.939 -0.536 7.355 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.066 3.934 3 C -0.196 4.196 4 C -0.237 4.237 5 O -0.281 6.281 6 C 0.004 3.996 7 H 0.112 0.888 8 C -0.164 4.164 9 C -0.127 4.127 10 H 0.128 0.872 11 C -0.012 4.012 12 O -0.186 6.186 13 C 0.155 3.845 14 C -0.167 4.167 15 N 0.553 4.447 16 O -0.386 6.386 17 O -0.354 6.354 18 C -0.011 4.011 19 C -0.160 4.160 20 C -0.181 4.181 21 O -0.332 6.332 22 Si 0.587 3.413 23 C -0.041 4.041 24 C -0.228 4.228 25 C -0.186 4.186 26 H 0.083 0.917 27 H 0.085 0.915 28 H 0.078 0.922 29 H 0.082 0.918 30 H 0.090 0.910 31 H 0.082 0.918 32 H 0.078 0.922 33 H 0.087 0.913 34 H 0.084 0.916 35 H 0.112 0.888 36 H 0.098 0.902 37 H 0.091 0.909 38 H 0.092 0.908 39 H 0.180 0.820 40 H 0.143 0.857 41 H 0.226 0.774 42 H -0.181 1.181 43 H -0.175 1.175 44 H 0.165 0.835 45 H 0.174 0.826 46 H 0.095 0.905 47 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges 7.793 2.034 0.596 8.076 hybrid contribution -1.256 0.588 -0.283 1.416 sum 6.537 2.623 0.313 7.051 Atomic orbital electron populations 1.22474 0.95386 1.02647 1.02936 1.21543 0.93293 0.93230 0.85323 1.21771 1.01967 0.93240 1.02637 1.22472 1.02285 1.00911 0.97998 1.88022 1.73818 1.23272 1.43019 1.23553 0.95461 0.82834 0.97713 0.88840 1.23238 0.96260 0.97325 0.99532 1.22326 0.98770 0.98537 0.93069 0.87181 1.23138 0.87068 0.95569 0.95387 1.86440 1.43471 1.68389 1.20254 1.18699 0.91395 0.89458 0.84935 1.20578 0.89775 1.13359 0.92971 1.43290 1.01323 0.98721 1.01329 1.94566 1.27434 1.39308 1.77296 1.94601 1.85735 1.55665 0.99421 1.20812 0.98463 0.93065 0.88726 1.20221 0.94969 1.03149 0.97698 1.25049 1.00506 1.03491 0.89027 1.86650 1.44938 1.25338 1.76260 0.95145 0.81080 0.82121 0.82969 1.21278 0.96821 0.91499 0.94552 1.21305 0.99246 1.07538 0.94716 1.23626 0.99482 0.95942 0.99556 0.91692 0.91497 0.92170 0.91778 0.91033 0.91792 0.92170 0.91313 0.91617 0.88814 0.90223 0.90876 0.90763 0.81962 0.85678 0.77434 1.18126 1.17506 0.83485 0.82621 0.90530 0.89222 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.10 8.38 37.15 0.31 0.41 16 2 C 0.11 -0.02 1.11 -90.62 -0.10 -0.12 16 3 C -0.14 0.08 8.84 37.16 0.33 0.41 16 4 C -0.18 0.18 8.38 37.16 0.31 0.49 16 5 O -0.36 -0.39 10.00 -35.23 -0.35 -0.74 16 6 C 0.06 -0.05 2.82 -25.92 -0.07 -0.12 16 7 H 0.09 -0.12 5.54 -51.93 -0.29 -0.41 16 8 C -0.13 0.26 7.47 -25.92 -0.19 0.07 16 9 C -0.11 0.18 4.01 -89.81 -0.36 -0.18 16 10 H 0.11 -0.13 8.14 -51.93 -0.42 -0.56 16 11 C 0.06 -0.13 4.58 37.16 0.17 0.04 16 12 O -0.28 -0.34 8.15 -41.56 -0.34 -0.68 16 13 C 0.21 0.15 6.67 -39.21 -0.26 -0.11 16 14 C -0.08 -0.21 6.87 -79.81 -0.55 -0.75 16 15 N 0.03 0.19 4.45 34.03 0.15 0.35 16 16 O -0.18 -1.16 18.45 -29.46 -0.54 -1.71 16 17 O -0.13 -0.89 17.24 -36.49 -0.63 -1.52 16 18 C 0.01 0.00 9.11 -39.61 -0.36 -0.36 16 19 C -0.16 0.27 5.39 -104.60 -0.56 -0.29 16 20 C -0.07 0.16 2.82 36.01 0.10 0.26 16 21 O -0.53 0.19 12.77 -35.23 -0.45 -0.26 16 22 Si 0.69 -2.22 29.79 -169.99 -5.06 -7.29 16 23 C -0.02 0.07 8.66 -39.60 -0.34 -0.27 16 24 C -0.21 0.50 9.04 -39.43 -0.36 0.14 16 25 C -0.15 0.10 7.47 -25.91 -0.19 -0.10 16 26 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 27 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 28 H 0.06 -0.04 7.02 -51.93 -0.36 -0.40 16 29 H 0.06 -0.02 8.14 -51.93 -0.42 -0.45 16 30 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 31 H 0.06 -0.01 8.14 -51.93 -0.42 -0.44 16 32 H 0.06 -0.08 6.24 -51.93 -0.32 -0.40 16 33 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 34 H 0.06 -0.04 8.14 -51.93 -0.42 -0.47 16 35 H 0.09 -0.20 8.10 -51.93 -0.42 -0.62 16 36 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 37 H 0.07 -0.23 7.36 -51.93 -0.38 -0.61 16 38 H 0.07 -0.28 7.66 -51.93 -0.40 -0.68 16 39 H 0.16 0.09 7.61 -52.48 -0.40 -0.31 16 40 H 0.13 -0.37 7.96 -51.93 -0.41 -0.78 16 41 H 0.38 -1.22 8.70 45.56 0.40 -0.82 16 42 H -0.26 0.42 7.11 56.52 0.40 0.82 16 43 H -0.25 -0.13 7.11 56.52 0.40 0.27 16 44 H 0.15 -0.83 4.87 -52.48 -0.26 -1.08 16 45 H 0.16 -0.78 6.30 -52.49 -0.33 -1.11 16 46 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 47 H 0.09 -0.02 7.90 -51.93 -0.41 -0.43 16 LS Contribution 383.37 15.07 5.78 5.78 Total: 0.00 -7.48 383.37 -10.60 -18.08 By element: Atomic # 1 Polarization: -4.53 SS G_CDS: -7.02 Total: -11.55 kcal Atomic # 6 Polarization: 1.66 SS G_CDS: -2.13 Total: -0.47 kcal Atomic # 7 Polarization: 0.19 SS G_CDS: 0.15 Total: 0.35 kcal Atomic # 8 Polarization: -2.59 SS G_CDS: -2.31 Total: -4.90 kcal Atomic # 14 Polarization: -2.22 SS G_CDS: -5.06 Total: -7.29 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -7.48 -10.60 -18.08 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_29190_14598384.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.848 kcal (2) G-P(sol) polarization free energy of solvation -7.485 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -54.332 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.595 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.080 kcal (6) G-S(sol) free energy of system = (1) + (5) -64.928 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds