Wall clock time and date at job start Mon Mar 8 2021 16:01:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86297 * 109.47224 * 2 1 4 4 C 1.50698 * 109.46988 * 119.99963 * 2 1 3 5 5 C 1.38250 * 119.93910 * 244.97699 * 4 2 1 6 6 C 1.38333 * 120.03275 * 180.02562 * 5 4 2 7 7 F 1.35100 * 120.05128 * 179.97438 * 6 5 4 8 8 C 1.38906 * 119.90213 * 359.97438 * 6 5 4 9 9 O 1.35959 * 120.06346 * 180.02562 * 8 6 5 10 10 C 1.42898 * 117.00520 * 180.02562 * 9 8 6 11 11 C 1.52995 * 109.47638 * 180.02562 * 10 9 8 12 12 H 1.08994 * 109.47233 * 180.02562 * 11 10 9 13 13 O 1.42970 * 109.46881 * 299.99777 * 11 10 9 14 14 C 1.43085 * 113.77252 * 178.79546 * 13 11 10 15 15 C 1.53259 * 108.94162 * 302.02875 * 14 13 11 16 16 H 1.09008 * 109.57715 * 294.71475 * 15 14 13 17 17 N 1.46499 * 109.57877 * 174.33378 * 15 14 13 18 18 C 1.34532 * 124.45707 * 299.69879 * 17 15 14 19 19 O 1.21443 * 125.70824 * 0.03756 * 18 17 15 20 20 C 1.47812 * 108.57768 * 179.90486 * 18 17 15 21 21 C 1.40945 * 105.88366 * 0.34527 * 20 18 17 22 22 C 1.38563 * 119.82074 * 179.79781 * 21 20 18 23 23 C 1.38609 * 119.72130 * 359.97438 * 22 21 20 24 24 C 1.38228 * 120.45794 * 0.04719 * 23 22 21 25 25 C 1.38575 * 134.29488 * 180.09757 * 20 18 17 26 26 C 1.34520 * 124.46653 * 119.99855 * 17 15 14 27 27 O 1.21448 * 125.70463 * 359.94238 * 26 17 15 28 28 C 1.53259 * 108.84799 * 54.52056 * 15 14 13 29 29 O 1.42967 * 109.47140 * 59.99330 * 11 10 9 30 30 C 1.38659 * 119.87862 * 359.74625 * 8 6 5 31 31 C 1.38183 * 119.96624 * 0.51102 * 30 8 6 32 32 H 0.96696 * 113.99856 * 300.00046 * 1 2 3 33 33 H 1.09001 * 109.46568 * 239.99893 * 2 1 3 34 34 H 1.48499 * 109.99968 * 178.68348 * 3 2 1 35 35 H 1.48501 * 110.00030 * 299.99958 * 3 2 1 36 36 H 1.08002 * 119.98174 * 0.04502 * 5 4 2 37 37 H 1.09005 * 109.46341 * 299.99686 * 10 9 8 38 38 H 1.09001 * 109.47314 * 59.99257 * 10 9 8 39 39 H 1.09004 * 109.55909 * 61.86569 * 14 13 11 40 40 H 1.09000 * 109.56195 * 182.07799 * 14 13 11 41 41 H 1.08007 * 120.13914 * 179.97438 * 22 21 20 42 42 H 1.08000 * 119.77129 * 180.02562 * 23 22 21 43 43 H 1.08002 * 119.76703 * 179.97438 * 24 23 22 44 44 H 1.07993 * 120.14076 * 0.30038 * 25 20 18 45 45 H 1.09004 * 109.55789 * 65.31838 * 28 15 14 46 46 H 1.09002 * 109.56145 * 185.52770 * 28 15 14 47 47 H 1.07995 * 120.02218 * 180.27405 * 30 8 6 48 48 H 1.08002 * 119.95612 * 179.77125 * 31 30 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6391 -0.0111 2.1903 6 6 3.1015 -0.6614 3.3203 7 9 3.7936 0.0215 4.2583 8 6 2.8532 -2.0176 3.4892 9 8 3.3057 -2.6599 4.5988 10 6 3.0140 -4.0547 4.7054 11 6 3.5982 -4.5997 6.0102 12 1 3.3760 -5.6637 6.0912 13 8 5.0149 -4.4076 6.0148 14 6 5.6547 -4.8623 7.2112 15 6 5.0439 -4.1303 8.4111 16 1 5.2759 -3.0671 8.3471 17 7 5.5920 -4.6809 9.6531 18 6 5.4674 -5.9642 10.0369 19 8 4.8921 -6.8365 9.4181 20 6 6.1507 -6.1355 11.3364 21 6 6.6651 -4.8669 11.6720 22 6 7.3659 -4.6985 12.8554 23 6 7.5555 -5.7799 13.7016 24 6 7.0513 -7.0241 13.3723 25 6 6.3484 -7.2076 12.1919 26 6 6.2813 -3.9687 10.5626 27 8 6.5446 -2.7856 10.4849 28 6 3.5240 -4.3263 8.3893 29 8 3.0196 -3.9056 7.1180 30 6 2.1380 -2.7139 2.5268 31 6 1.6831 -2.0603 1.3975 32 1 -0.3933 0.4417 0.7650 33 1 1.7923 -0.5139 -0.8900 34 1 3.5346 1.7702 0.0321 35 1 1.5616 2.4679 -1.2085 36 1 2.8307 1.0435 2.0580 37 1 1.9338 -4.2010 4.7024 38 1 3.4547 -4.5838 3.8605 39 1 5.5011 -5.9358 7.3218 40 1 6.7225 -4.6502 7.1572 41 1 7.7627 -3.7288 13.1174 42 1 8.1012 -5.6494 14.6244 43 1 7.2060 -7.8590 14.0397 44 1 5.9568 -8.1820 11.9398 45 1 3.2897 -5.3794 8.5446 46 1 3.0679 -3.7306 9.1800 47 1 1.9398 -3.7674 2.6579 48 1 1.1292 -2.6037 0.6463 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_7834706_13594088.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 16:01:12 Heat of formation + Delta-G solvation = -160.751220 kcal Electronic energy + Delta-G solvation = -39298.575499 eV Core-core repulsion = 33781.410404 eV Total energy + Delta-G solvation = -5517.165094 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 416.124 amu Computer time = 1.47 seconds Orbital eigenvalues (eV) -49.64533 -43.68549 -41.50635 -40.89866 -39.82768 -39.65058 -39.15045 -37.22661 -37.05374 -36.98192 -34.59386 -32.37676 -32.32221 -31.97146 -31.20279 -29.75366 -27.41918 -26.54537 -26.35325 -25.58192 -24.70462 -23.57010 -23.37529 -22.63738 -22.19816 -21.02335 -19.63570 -19.07417 -19.01278 -18.75929 -18.52755 -18.15562 -17.70579 -17.59586 -17.10360 -17.02350 -16.96033 -16.86004 -16.45229 -16.12886 -16.07189 -16.04963 -15.91223 -15.82712 -15.71151 -15.62151 -15.25191 -15.17448 -14.96337 -14.68560 -14.58573 -14.21304 -13.99187 -13.91303 -13.79179 -13.54632 -13.37870 -13.29193 -12.88215 -12.66682 -12.42339 -12.32682 -12.14097 -12.09243 -12.05320 -11.90932 -11.71093 -11.56314 -10.88897 -10.77263 -10.47121 -10.46239 -10.43257 -10.02578 -9.18768 -5.03926 -1.17484 -0.27002 0.03761 0.11916 0.79972 0.91336 1.26891 1.63211 1.66659 1.87082 1.96945 2.23338 2.29935 2.37029 2.37372 2.43102 3.05738 3.15376 3.21000 3.30094 3.35560 3.42130 3.44905 3.51433 3.67517 3.68482 3.74933 3.84945 3.85640 3.94743 3.98659 4.00676 4.01987 4.07140 4.11880 4.14507 4.16788 4.32374 4.34439 4.48677 4.51420 4.53312 4.61384 4.69537 4.75973 4.88232 4.95887 4.98223 5.03872 5.31277 5.32495 5.39577 5.44792 5.56708 5.78968 5.97174 6.20894 6.41604 6.54114 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.061 4.061 3 Si 0.681 3.319 4 C -0.132 4.132 5 C -0.112 4.112 6 C 0.078 3.922 7 F -0.126 7.126 8 C 0.106 3.894 9 O -0.285 6.285 10 C 0.075 3.925 11 C 0.245 3.755 12 H 0.088 0.912 13 O -0.369 6.369 14 C 0.048 3.952 15 C 0.074 3.926 16 H 0.131 0.869 17 N -0.570 5.570 18 C 0.576 3.424 19 O -0.460 6.460 20 C -0.143 4.143 21 C -0.139 4.139 22 C -0.042 4.042 23 C -0.092 4.092 24 C -0.094 4.094 25 C -0.042 4.042 26 C 0.575 3.425 27 O -0.451 6.451 28 C 0.048 3.952 29 O -0.369 6.369 30 C -0.185 4.185 31 C -0.059 4.059 32 H 0.380 0.620 33 H 0.117 0.883 34 H -0.255 1.255 35 H -0.251 1.251 36 H 0.145 0.855 37 H 0.092 0.908 38 H 0.092 0.908 39 H 0.074 0.926 40 H 0.110 0.890 41 H 0.145 0.855 42 H 0.145 0.855 43 H 0.145 0.855 44 H 0.144 0.856 45 H 0.075 0.925 46 H 0.110 0.890 47 H 0.140 0.860 48 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.012 -4.656 5.232 7.004 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.172 4.172 3 Si 0.582 3.418 4 C -0.133 4.133 5 C -0.131 4.131 6 C 0.058 3.942 7 F -0.105 7.105 8 C 0.059 3.941 9 O -0.197 6.197 10 C 0.000 4.000 11 C 0.150 3.850 12 H 0.105 0.895 13 O -0.288 6.288 14 C -0.029 4.029 15 C -0.028 4.028 16 H 0.148 0.852 17 N -0.315 5.315 18 C 0.366 3.634 19 O -0.331 6.331 20 C -0.146 4.146 21 C -0.143 4.143 22 C -0.061 4.061 23 C -0.110 4.110 24 C -0.112 4.112 25 C -0.060 4.060 26 C 0.364 3.636 27 O -0.321 6.321 28 C -0.029 4.029 29 O -0.288 6.288 30 C -0.203 4.203 31 C -0.078 4.078 32 H 0.228 0.772 33 H 0.134 0.866 34 H -0.180 1.180 35 H -0.176 1.176 36 H 0.162 0.838 37 H 0.110 0.890 38 H 0.110 0.890 39 H 0.092 0.908 40 H 0.128 0.872 41 H 0.163 0.837 42 H 0.163 0.837 43 H 0.163 0.837 44 H 0.162 0.838 45 H 0.093 0.907 46 H 0.128 0.872 47 H 0.158 0.842 48 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 0.466 -3.817 3.776 5.390 hybrid contribution 0.271 -0.986 0.258 1.055 sum 0.736 -4.803 4.034 6.316 Atomic orbital electron populations 1.86510 1.16932 1.81686 1.49322 1.24950 0.85299 1.09949 0.97009 0.94770 0.81403 0.78108 0.87471 1.20057 1.01136 0.94897 0.97208 1.20843 0.99378 1.00232 0.92614 1.16804 1.00377 0.87415 0.89572 1.91547 1.76724 1.79027 1.63181 1.19069 0.96001 0.90989 0.88027 1.86294 1.73141 1.22598 1.37700 1.22940 1.00963 0.80623 0.95494 1.23607 0.79496 0.95212 0.86683 0.89517 1.88263 1.19888 1.83866 1.36825 1.23017 0.98554 0.98510 0.82811 1.22653 0.95790 1.02081 0.82232 0.85160 1.46452 1.52032 1.11575 1.21482 1.18455 0.78470 0.81269 0.85226 1.90809 1.39253 1.44170 1.58886 1.20464 1.02475 0.95614 0.96094 1.20471 1.02869 0.94135 0.96833 1.20874 0.94214 1.00329 0.90663 1.21562 0.97830 0.92058 0.99553 1.21555 0.95497 0.98173 0.95948 1.20854 0.95139 0.98048 0.91980 1.18419 0.76509 0.86508 0.82118 1.90864 1.50894 1.13700 1.76637 1.23025 0.91036 1.02128 0.86746 1.88261 1.62867 1.64053 1.13608 1.21210 1.02785 1.00968 0.95373 1.20872 0.96858 0.93443 0.96585 0.77234 0.86605 1.18011 1.17616 0.83772 0.88957 0.89021 0.90762 0.87221 0.83739 0.83684 0.83708 0.83811 0.90678 0.87203 0.84217 0.84559 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.05 12.83 -35.23 -0.45 -0.40 16 2 C -0.06 0.02 2.80 36.00 0.10 0.13 16 3 Si 0.68 -0.49 29.80 -169.99 -5.07 -5.55 16 4 C -0.13 -0.03 5.35 -104.61 -0.56 -0.59 16 5 C -0.11 -0.11 8.64 -39.54 -0.34 -0.45 16 6 C 0.08 0.25 7.31 -39.30 -0.29 -0.04 16 7 F -0.13 -0.65 17.11 2.25 0.04 -0.62 16 8 C 0.11 0.28 6.69 -39.18 -0.26 0.01 16 9 O -0.28 -1.02 9.79 -40.09 -0.39 -1.41 16 10 C 0.08 0.00 4.83 37.15 0.18 0.18 16 11 C 0.25 0.26 3.59 37.15 0.13 0.39 16 12 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 13 O -0.37 -0.98 10.43 -63.56 -0.66 -1.64 16 14 C 0.05 0.06 6.33 37.29 0.24 0.29 16 15 C 0.07 0.11 3.07 -67.66 -0.21 -0.10 16 16 H 0.13 0.33 7.60 -51.92 -0.39 -0.07 16 17 N -0.57 -0.70 2.53 -110.22 -0.28 -0.97 16 18 C 0.58 0.67 7.35 -12.45 -0.09 0.58 16 19 O -0.46 -1.24 15.16 5.42 0.08 -1.15 16 20 C -0.14 0.04 6.40 -104.83 -0.67 -0.63 16 21 C -0.14 0.00 6.40 -104.84 -0.67 -0.67 16 22 C -0.04 0.09 10.09 -39.32 -0.40 -0.31 16 23 C -0.09 0.35 10.04 -39.45 -0.40 -0.05 16 24 C -0.09 0.37 10.03 -39.45 -0.40 -0.03 16 25 C -0.04 0.10 10.09 -39.32 -0.40 -0.30 16 26 C 0.58 1.13 8.02 -12.46 -0.10 1.03 16 27 O -0.45 -2.10 17.44 5.41 0.09 -2.00 16 28 C 0.05 0.05 6.32 37.29 0.24 0.29 16 29 O -0.37 -0.94 10.43 -63.56 -0.66 -1.60 16 30 C -0.18 -0.03 9.04 -39.45 -0.36 -0.39 16 31 C -0.06 0.00 9.68 -39.59 -0.38 -0.38 16 32 H 0.38 -1.44 8.70 45.56 0.40 -1.05 16 33 H 0.12 -0.04 7.96 -51.93 -0.41 -0.45 16 34 H -0.26 -0.48 7.11 56.52 0.40 -0.07 16 35 H -0.25 -0.59 7.11 56.52 0.40 -0.18 16 36 H 0.15 -0.12 4.90 -52.49 -0.26 -0.38 16 37 H 0.09 -0.19 7.65 -51.93 -0.40 -0.59 16 38 H 0.09 -0.18 7.68 -51.93 -0.40 -0.58 16 39 H 0.07 0.07 6.71 -51.93 -0.35 -0.28 16 40 H 0.11 0.05 8.14 -51.93 -0.42 -0.37 16 41 H 0.14 -0.47 8.06 -52.48 -0.42 -0.89 16 42 H 0.15 -0.90 8.06 -52.49 -0.42 -1.32 16 43 H 0.15 -0.91 8.06 -52.49 -0.42 -1.33 16 44 H 0.14 -0.53 8.06 -52.49 -0.42 -0.95 16 45 H 0.08 0.07 6.63 -51.93 -0.34 -0.28 16 46 H 0.11 0.04 8.14 -51.93 -0.42 -0.38 16 47 H 0.14 -0.32 6.30 -52.49 -0.33 -0.66 16 48 H 0.14 -0.17 8.06 -52.49 -0.42 -0.59 16 LS Contribution 410.68 15.07 6.19 6.19 Total: 0.00 -10.37 410.68 -10.81 -21.18 By element: Atomic # 1 Polarization: -5.89 SS G_CDS: -5.07 Total: -10.96 kcal Atomic # 6 Polarization: 3.58 SS G_CDS: -4.63 Total: -1.05 kcal Atomic # 7 Polarization: -0.70 SS G_CDS: -0.28 Total: -0.97 kcal Atomic # 8 Polarization: -6.22 SS G_CDS: -1.99 Total: -8.21 kcal Atomic # 9 Polarization: -0.65 SS G_CDS: 0.04 Total: -0.62 kcal Atomic # 14 Polarization: -0.49 SS G_CDS: -5.07 Total: -5.55 kcal Total LS contribution 6.19 Total: 6.19 kcal Total: -10.37 -10.81 -21.18 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_7834706_13594088.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -139.572 kcal (2) G-P(sol) polarization free energy of solvation -10.367 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -149.939 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.812 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.180 kcal (6) G-S(sol) free energy of system = (1) + (5) -160.751 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.47 seconds