Wall clock time and date at job start Mon Mar 8 2021 16:13:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86306 * 1 3 3 C 1.86298 * 109.47157 * 2 1 4 4 C 1.86304 * 109.46961 * 239.99654 * 2 1 3 5 5 C 1.86300 * 109.46949 * 120.00042 * 2 1 3 6 6 O 1.42898 * 109.47183 * 66.67941 * 5 2 1 7 7 C 1.35956 * 116.99910 * 282.28148 * 6 5 2 8 8 C 1.38619 * 120.06224 * 353.82486 * 7 6 5 9 9 C 1.38231 * 119.96430 * 179.74667 * 8 7 6 10 10 C 1.38211 * 120.09933 * 0.52375 * 9 8 7 11 11 C 1.50700 * 119.94060 * 179.72912 * 10 9 8 12 12 O 1.42894 * 109.47440 * 120.02306 * 11 10 9 13 13 Si 1.86300 * 109.46790 * 0.02562 * 11 10 9 14 14 H 1.48497 * 109.47020 * 60.00516 * 13 11 10 15 15 H 1.48499 * 109.46961 * 180.02562 * 13 11 10 16 16 H 1.48500 * 109.47385 * 299.99989 * 13 11 10 17 17 C 1.38305 * 120.12570 * 359.74809 * 10 9 8 18 18 C 1.38295 * 120.02788 * 359.97438 * 17 10 9 19 19 F 1.35100 * 120.04519 * 179.97438 * 18 17 10 20 20 H 1.09000 * 109.46439 * 295.85543 * 1 2 3 21 21 H 1.08996 * 109.46876 * 55.85572 * 1 2 3 22 22 H 1.08997 * 109.46912 * 175.85579 * 1 2 3 23 23 H 1.09006 * 109.47001 * 179.97438 * 3 2 1 24 24 H 1.09002 * 109.47041 * 299.99752 * 3 2 1 25 25 H 1.08998 * 109.47262 * 60.00310 * 3 2 1 26 26 H 1.08993 * 109.47173 * 305.00409 * 4 2 1 27 27 H 1.09004 * 109.46386 * 65.00729 * 4 2 1 28 28 H 1.08994 * 109.46902 * 185.00202 * 4 2 1 29 29 H 1.09000 * 109.47079 * 306.67598 * 5 2 1 30 30 H 1.09002 * 109.47164 * 186.67764 * 5 2 1 31 31 H 1.07993 * 120.01598 * 0.02562 * 8 7 6 32 32 H 1.07997 * 119.94848 * 180.25094 * 9 8 7 33 33 H 1.09001 * 109.46885 * 240.02309 * 11 10 9 34 34 H 0.96703 * 113.99568 * 299.99551 * 12 11 10 35 35 H 1.08000 * 119.98603 * 179.97438 * 17 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8631 0.0000 0.0000 3 6 2.4841 1.7564 0.0000 4 6 2.4840 -0.8783 -1.5211 5 6 2.4840 -0.8782 1.5211 6 8 2.1399 -2.2631 1.4454 7 6 0.8535 -2.5961 1.7328 8 6 -0.0247 -1.6322 2.2032 9 6 -1.3337 -1.9718 2.4898 10 6 -1.7655 -3.2735 2.3182 11 6 -3.1917 -3.6411 2.6375 12 8 -3.8275 -4.1480 1.4625 13 14 -4.1036 -2.1301 3.2343 14 1 -4.0859 -1.0905 2.1741 15 1 -5.5088 -2.4924 3.5495 16 1 -3.4429 -1.6033 4.4554 17 6 -0.8911 -4.2395 1.8544 18 6 0.4181 -3.9043 1.5607 19 9 1.2726 -4.8478 1.1081 20 1 -0.3632 0.4482 0.9248 21 1 -0.3633 0.5768 -0.8505 22 1 -0.3633 -1.0250 -0.0743 23 1 3.5741 1.7564 0.0005 24 1 2.1208 2.2702 -0.8900 25 1 2.1208 2.2703 0.8900 26 1 2.0494 -1.8768 -1.5670 27 1 2.1957 -0.3153 -2.4088 28 1 3.5703 -0.9566 -1.4774 29 1 2.0264 -0.4380 2.4071 30 1 3.5675 -0.7759 1.5829 31 1 0.3123 -0.6156 2.3415 32 1 -2.0188 -1.2199 2.8524 33 1 -3.2046 -4.4043 3.4156 34 1 -3.8524 -3.5206 0.7271 35 1 -1.2308 -5.2561 1.7216 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_7834706_3095236.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 16:13:10 Heat of formation + Delta-G solvation = -120.286318 kcal Electronic energy + Delta-G solvation = -17908.359453 eV Core-core repulsion = 14945.318986 eV Total energy + Delta-G solvation = -2963.040466 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 258.100 amu Computer time = 0.20 seconds Orbital eigenvalues (eV) -49.67187 -41.26855 -39.21907 -37.18210 -32.11411 -31.92225 -29.82637 -28.56920 -28.51986 -28.21677 -26.18439 -23.84089 -22.49089 -19.52697 -18.50896 -17.98142 -17.43728 -17.17698 -16.22043 -16.12592 -15.90118 -15.77243 -15.50208 -15.03079 -14.40780 -14.21114 -14.07312 -13.97653 -13.74322 -13.52026 -13.37940 -13.35680 -13.22309 -12.98161 -12.72348 -12.44012 -12.30654 -12.11798 -11.63208 -11.06545 -10.96641 -10.87819 -10.49973 -9.92385 -9.06714 0.03976 0.08975 1.07832 1.33601 1.37135 1.44100 1.54683 1.62670 1.85120 2.23975 2.35946 2.44477 3.18485 3.39874 3.54195 3.67596 3.85380 4.02855 4.16809 4.44191 4.49709 4.52681 4.54571 4.55947 4.61879 4.63273 4.70736 4.72919 4.83385 4.91828 5.01352 5.25046 5.31148 5.40967 5.49195 5.56015 6.22122 6.49357 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.451 4.451 2 Si 0.988 3.012 3 C -0.447 4.447 4 C -0.443 4.443 5 C -0.248 4.248 6 O -0.284 6.284 7 C 0.096 3.904 8 C -0.174 4.174 9 C -0.097 4.097 10 C -0.131 4.131 11 C -0.077 4.077 12 O -0.537 6.537 13 Si 0.948 3.052 14 H -0.249 1.249 15 H -0.252 1.252 16 H -0.250 1.250 17 C -0.088 4.088 18 C 0.070 3.930 19 F -0.130 7.130 20 H 0.072 0.928 21 H 0.073 0.927 22 H 0.074 0.926 23 H 0.072 0.928 24 H 0.075 0.925 25 H 0.071 0.929 26 H 0.072 0.928 27 H 0.071 0.929 28 H 0.071 0.929 29 H 0.074 0.926 30 H 0.112 0.888 31 H 0.147 0.853 32 H 0.129 0.871 33 H 0.120 0.880 34 H 0.377 0.623 35 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.834 4.164 0.338 4.260 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.559 4.559 2 Si 1.184 2.816 3 C -0.555 4.555 4 C -0.552 4.552 5 C -0.368 4.368 6 O -0.196 6.196 7 C 0.049 3.951 8 C -0.193 4.193 9 C -0.115 4.115 10 C -0.132 4.132 11 C -0.187 4.187 12 O -0.343 6.343 13 Si 0.770 3.230 14 H -0.173 1.173 15 H -0.176 1.176 16 H -0.173 1.173 17 C -0.107 4.107 18 C 0.050 3.950 19 F -0.108 7.108 20 H 0.091 0.909 21 H 0.092 0.908 22 H 0.093 0.907 23 H 0.091 0.909 24 H 0.094 0.906 25 H 0.090 0.910 26 H 0.091 0.909 27 H 0.090 0.910 28 H 0.090 0.910 29 H 0.092 0.908 30 H 0.130 0.870 31 H 0.164 0.836 32 H 0.147 0.853 33 H 0.138 0.862 34 H 0.224 0.776 35 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -1.121 4.192 0.975 4.448 hybrid contribution 0.614 0.129 -0.381 0.734 sum -0.507 4.321 0.594 4.391 Atomic orbital electron populations 1.26464 1.19628 1.05040 1.04739 0.79868 0.68144 0.66806 0.66779 1.26051 1.06538 1.17999 1.04927 1.26003 1.06429 1.08227 1.14509 1.28276 1.07165 0.85555 1.15811 1.86116 1.23208 1.26639 1.83655 1.19076 0.85453 0.92735 0.97798 1.21180 0.93995 0.99914 1.04192 1.20868 0.95704 0.95689 0.99203 1.20043 0.96948 0.93101 1.03075 1.24942 0.91235 1.10153 0.92386 1.86528 1.79522 1.44490 1.23714 0.85716 0.80158 0.76088 0.81023 1.17279 1.17606 1.17336 1.20857 0.90028 1.01295 0.98524 1.17001 0.88621 0.84029 1.05379 1.91530 1.69497 1.63043 1.86755 0.90903 0.90779 0.90651 0.90913 0.90599 0.91013 0.90920 0.91021 0.91030 0.90790 0.86995 0.83573 0.85334 0.86177 0.77567 0.83451 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 1.02 7.03 101.05 0.71 1.73 16 2 Si 0.99 -2.91 11.67 -169.99 -1.98 -4.89 16 3 C -0.45 1.25 8.65 101.05 0.87 2.12 16 4 C -0.44 0.39 8.65 101.05 0.87 1.26 16 5 C -0.25 0.38 5.31 101.05 0.54 0.91 16 6 O -0.28 -0.57 9.66 -19.60 -0.19 -0.76 16 7 C 0.10 0.17 5.80 -39.18 -0.23 -0.06 16 8 C -0.17 0.06 5.62 -39.44 -0.22 -0.16 16 9 C -0.10 0.06 8.66 -39.59 -0.34 -0.28 16 10 C -0.13 0.02 5.39 -104.61 -0.56 -0.54 16 11 C -0.08 0.09 2.82 36.01 0.10 0.19 16 12 O -0.54 0.20 12.77 -35.23 -0.45 -0.25 16 13 Si 0.95 -1.36 25.07 -169.99 -4.26 -5.62 16 14 H -0.25 0.36 7.11 56.52 0.40 0.77 16 15 H -0.25 -0.05 7.11 56.52 0.40 0.35 16 16 H -0.25 0.25 7.11 56.52 0.40 0.66 16 17 C -0.09 -0.09 9.58 -39.54 -0.38 -0.47 16 18 C 0.07 0.19 7.31 -39.30 -0.29 -0.10 16 19 F -0.13 -0.59 17.11 2.25 0.04 -0.55 16 20 H 0.07 -0.23 6.52 -51.93 -0.34 -0.57 16 21 H 0.07 -0.18 7.96 -51.93 -0.41 -0.59 16 22 H 0.07 -0.09 6.50 -51.93 -0.34 -0.42 16 23 H 0.07 -0.20 7.96 -51.93 -0.41 -0.61 16 24 H 0.07 -0.19 7.96 -51.93 -0.41 -0.61 16 25 H 0.07 -0.23 7.96 -51.93 -0.41 -0.64 16 26 H 0.07 0.03 7.96 -51.93 -0.41 -0.39 16 27 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 28 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 29 H 0.07 -0.21 6.08 -51.93 -0.32 -0.53 16 30 H 0.11 -0.28 7.96 -51.93 -0.41 -0.70 16 31 H 0.15 -0.39 4.23 -52.49 -0.22 -0.61 16 32 H 0.13 -0.29 4.87 -52.49 -0.26 -0.55 16 33 H 0.12 -0.23 7.96 -51.93 -0.41 -0.64 16 34 H 0.38 -1.33 8.70 45.56 0.40 -0.94 16 35 H 0.15 0.04 8.06 -52.49 -0.42 -0.38 16 LS Contribution 289.04 15.07 4.36 4.36 Total: 0.00 -5.07 289.04 -5.43 -10.49 By element: Atomic # 1 Polarization: -3.37 SS G_CDS: -4.01 Total: -7.38 kcal Atomic # 6 Polarization: 3.53 SS G_CDS: 1.08 Total: 4.60 kcal Atomic # 8 Polarization: -0.37 SS G_CDS: -0.64 Total: -1.01 kcal Atomic # 9 Polarization: -0.59 SS G_CDS: 0.04 Total: -0.55 kcal Atomic # 14 Polarization: -4.27 SS G_CDS: -6.25 Total: -10.51 kcal Total LS contribution 4.36 Total: 4.36 kcal Total: -5.07 -5.43 -10.49 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_7834706_3095236.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -109.792 kcal (2) G-P(sol) polarization free energy of solvation -5.067 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -114.859 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.427 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -10.495 kcal (6) G-S(sol) free energy of system = (1) + (5) -120.286 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.20 seconds