Wall clock time and date at job start Mon Mar 8 2021 15:36:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86294 * 109.47344 * 2 1 4 4 C 1.50703 * 109.46855 * 119.99838 * 2 1 3 5 5 C 1.36619 * 119.52706 * 75.00053 * 4 2 1 6 6 O 1.35832 * 120.21602 * 359.97438 * 5 4 2 7 7 C 1.42904 * 116.99791 * 269.97777 * 6 5 4 8 8 C 1.53006 * 109.46977 * 180.02562 * 7 6 5 9 9 H 1.09005 * 112.84660 * 314.67109 * 8 7 6 10 10 C 1.53778 * 113.61310 * 85.86168 * 8 7 6 11 11 C 1.53957 * 87.01808 * 139.95131 * 10 8 7 12 12 H 1.09005 * 113.61263 * 89.19893 * 11 10 8 13 13 O 1.42894 * 113.67112 * 220.06800 * 11 10 8 14 14 C 1.53780 * 113.61399 * 183.47459 * 8 7 6 15 15 C 1.40991 * 119.56437 * 179.97438 * 5 4 2 16 16 C 1.40383 * 121.28405 * 179.97438 * 15 5 4 17 17 C 1.36173 * 119.66093 * 179.97438 * 16 15 5 18 18 C 1.39315 * 120.97220 * 0.02562 * 17 16 15 19 19 C 1.36135 * 120.97160 * 0.02562 * 18 17 16 20 20 C 1.40484 * 119.65362 * 359.97362 * 19 18 17 21 21 C 1.40659 * 121.27327 * 180.02562 * 20 19 18 22 22 Cl 1.73606 * 120.12576 * 359.97053 * 21 20 19 23 23 C 1.36234 * 119.74603 * 180.02562 * 21 20 19 24 24 H 0.96692 * 113.99954 * 300.00461 * 1 2 3 25 25 H 1.08996 * 109.47313 * 239.99769 * 2 1 3 26 26 H 1.48495 * 110.00154 * 299.99532 * 3 2 1 27 27 H 1.48500 * 110.00127 * 61.31771 * 3 2 1 28 28 H 1.08993 * 109.47293 * 300.00104 * 7 6 5 29 29 H 1.09003 * 109.46800 * 60.00529 * 7 6 5 30 30 H 1.08994 * 113.61733 * 254.53177 * 10 8 7 31 31 H 1.08995 * 113.61402 * 25.43731 * 10 8 7 32 32 H 0.96705 * 113.99731 * 277.56446 * 13 11 10 33 33 H 1.08996 * 113.61214 * 334.56413 * 14 8 7 34 34 H 1.08993 * 113.61414 * 105.47102 * 14 8 7 35 35 H 1.08003 * 120.17068 * 359.97438 * 16 15 5 36 36 H 1.08006 * 119.50992 * 180.28198 * 17 16 15 37 37 H 1.08000 * 119.51466 * 179.97438 * 18 17 16 38 38 H 1.08001 * 120.17266 * 179.97438 * 19 18 17 39 39 H 1.08004 * 119.47579 * 179.97438 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.8656 -2.0735 1.2950 6 8 1.3508 -2.7829 0.2574 7 6 -0.0544 -3.0417 0.2824 8 6 -0.4468 -3.8471 -0.9580 9 1 -0.0010 -3.4582 -1.8736 10 6 -0.2754 -5.3656 -0.7861 11 6 -1.5989 -5.5211 -1.5571 12 1 -1.4693 -5.5917 -2.6371 13 8 -2.4518 -6.5407 -1.0328 14 6 -1.9583 -4.1071 -1.0709 15 6 2.3358 -2.7389 2.4456 16 6 2.2852 -4.1379 2.5505 17 6 2.7490 -4.7465 3.6769 18 6 3.2741 -4.0010 4.7302 19 6 3.3379 -2.6428 4.6636 20 6 2.8688 -1.9802 3.5171 21 6 2.9189 -0.5785 3.4120 22 17 3.5684 0.3702 4.7127 23 6 2.4547 0.0319 2.2859 24 1 -0.3933 0.4417 0.7649 25 1 1.7924 -0.5138 -0.8899 26 1 1.5617 2.4678 -1.2085 27 1 1.5880 2.4585 1.2242 28 1 -0.3033 -3.6105 1.1782 29 1 -0.5978 -2.0967 0.2893 30 1 0.5884 -5.7700 -1.3135 31 1 -0.3327 -5.6968 0.2508 32 1 -2.2307 -7.4323 -1.3351 33 1 -2.4764 -4.0937 -0.1120 34 1 -2.4509 -3.4971 -1.8280 35 1 1.8804 -4.7285 1.7419 36 1 2.7131 -5.8233 3.7530 37 1 3.6350 -4.5080 5.6128 38 1 3.7471 -2.0776 5.4880 39 1 2.4949 1.1085 2.2100 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_8272892_11354858.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 15:36:51 Heat of formation + Delta-G solvation = -44.043177 kcal Electronic energy + Delta-G solvation = -25046.073802 eV Core-core repulsion = 21333.538399 eV Total energy + Delta-G solvation = -3712.535403 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 321.085 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -42.09804 -40.48247 -39.35800 -38.39188 -37.77115 -36.67843 -35.97517 -33.03675 -32.09699 -30.50009 -28.94069 -26.88186 -26.70733 -24.68684 -23.55870 -23.22277 -22.73222 -20.58335 -19.24290 -18.83252 -18.77216 -18.54689 -17.44254 -17.01125 -16.58805 -16.49316 -16.14175 -15.94928 -15.62530 -15.38357 -15.07811 -14.89628 -14.83147 -14.44209 -14.25797 -13.90889 -13.65768 -13.47475 -13.25978 -12.79592 -12.68429 -12.51151 -12.41608 -12.25620 -12.00125 -11.90330 -11.83116 -11.76861 -11.38067 -10.91378 -10.75123 -10.71372 -10.61994 -9.85199 -8.89549 -4.96441 -0.81565 -0.29720 0.71635 0.93094 1.23447 1.52059 1.59103 1.89049 2.38871 2.86977 3.26698 3.31863 3.42787 3.47813 3.50728 3.57361 3.73854 3.82686 3.88855 3.94368 4.03048 4.11719 4.24610 4.29810 4.31913 4.35988 4.41862 4.57950 4.67316 4.69005 4.73788 4.75550 4.78676 4.92466 4.93495 4.99425 5.05101 5.14700 5.27500 5.39524 5.40911 5.44808 5.80996 6.35968 6.41786 6.86577 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.070 4.070 3 Si 0.759 3.241 4 C -0.133 4.133 5 C 0.140 3.860 6 O -0.331 6.331 7 C 0.080 3.920 8 C -0.101 4.101 9 H 0.105 0.895 10 C -0.159 4.159 11 C 0.075 3.925 12 H 0.098 0.902 13 O -0.581 6.581 14 C -0.123 4.123 15 C -0.077 4.077 16 C -0.105 4.105 17 C -0.111 4.111 18 C -0.102 4.102 19 C -0.120 4.120 20 C -0.045 4.045 21 C -0.033 4.033 22 Cl -0.052 7.052 23 C -0.098 4.098 24 H 0.384 0.616 25 H 0.122 0.878 26 H -0.293 1.293 27 H -0.272 1.272 28 H 0.049 0.951 29 H 0.073 0.927 30 H 0.079 0.921 31 H 0.083 0.917 32 H 0.395 0.605 33 H 0.082 0.918 34 H 0.084 0.916 35 H 0.137 0.863 36 H 0.151 0.849 37 H 0.153 0.847 38 H 0.143 0.857 39 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.794 -2.036 -0.079 2.714 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.179 4.179 3 Si 0.663 3.337 4 C -0.135 4.135 5 C 0.095 3.905 6 O -0.249 6.249 7 C 0.007 3.993 8 C -0.119 4.119 9 H 0.123 0.877 10 C -0.197 4.197 11 C 0.016 3.984 12 H 0.116 0.884 13 O -0.390 6.390 14 C -0.160 4.160 15 C -0.078 4.078 16 C -0.123 4.123 17 C -0.129 4.129 18 C -0.119 4.119 19 C -0.137 4.137 20 C -0.046 4.046 21 C -0.060 4.060 22 Cl -0.023 7.023 23 C -0.117 4.117 24 H 0.234 0.766 25 H 0.140 0.860 26 H -0.221 1.221 27 H -0.198 1.198 28 H 0.067 0.933 29 H 0.091 0.909 30 H 0.098 0.902 31 H 0.101 0.899 32 H 0.245 0.755 33 H 0.100 0.900 34 H 0.102 0.898 35 H 0.155 0.845 36 H 0.168 0.832 37 H 0.170 0.830 38 H 0.160 0.840 39 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 1.537 -1.007 -0.376 1.875 hybrid contribution -0.815 -0.410 0.549 1.065 sum 0.722 -1.416 0.173 1.599 Atomic orbital electron populations 1.86598 1.17833 1.79926 1.50091 1.25058 0.83791 1.11471 0.97600 0.93883 0.90587 0.72039 0.77157 1.20173 1.02888 0.93154 0.97251 1.18283 0.95911 0.89367 0.86928 1.85900 1.24507 1.72920 1.41540 1.22934 0.78519 1.00061 0.97810 1.22242 0.96341 0.95082 0.98248 0.87685 1.23742 0.98721 0.95423 1.01765 1.23425 0.89629 0.87923 0.97384 0.88421 1.86482 1.58211 1.20160 1.74130 1.23052 0.95102 0.95178 1.02668 1.18420 1.01375 0.94911 0.93115 1.21116 0.99615 0.92463 0.99127 1.21301 0.96921 1.01808 0.92834 1.21308 0.97267 0.93731 0.99620 1.21301 0.99859 0.95703 0.96888 1.17871 1.00054 0.91301 0.95352 1.20673 1.02767 0.90917 0.91623 1.98384 1.84483 1.71103 1.48340 1.20729 0.98271 1.01257 0.91420 0.76642 0.85968 1.22055 1.19849 0.93299 0.90894 0.90246 0.89881 0.75484 0.89960 0.89778 0.84506 0.83175 0.82963 0.83950 0.82925 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.61 10.71 -148.98 -1.60 -2.21 16 2 C -0.07 -0.01 2.32 71.24 0.17 0.15 16 3 Si 0.76 -1.19 30.21 68.60 2.07 0.88 16 4 C -0.13 -0.29 5.24 -20.00 -0.10 -0.39 16 5 C 0.14 0.63 5.67 22.57 0.13 0.76 16 6 O -0.33 -1.43 8.52 -91.66 -0.78 -2.21 16 7 C 0.08 0.16 5.82 71.98 0.42 0.57 16 8 C -0.10 0.01 4.00 -10.27 -0.04 -0.03 16 9 H 0.10 -0.02 8.14 -2.38 -0.02 -0.04 16 10 C -0.16 0.18 7.48 31.18 0.23 0.41 16 11 C 0.08 -0.06 5.21 31.18 0.16 0.10 16 12 H 0.10 -0.37 8.14 -2.38 -0.02 -0.39 16 13 O -0.58 -0.95 13.67 -148.98 -2.04 -2.99 16 14 C -0.12 -0.03 7.48 31.12 0.23 0.21 16 15 C -0.08 -0.38 5.75 -21.23 -0.12 -0.50 16 16 C -0.11 -0.26 9.56 22.31 0.21 -0.04 16 17 C -0.11 0.06 9.95 22.05 0.22 0.28 16 18 C -0.10 0.08 9.95 22.04 0.22 0.29 16 19 C -0.12 -0.22 9.44 22.33 0.21 -0.01 16 20 C -0.04 -0.20 5.74 -21.29 -0.12 -0.32 16 21 C -0.03 -0.11 6.32 22.39 0.14 0.03 16 22 Cl -0.05 -0.12 27.50 -2.72 -0.07 -0.19 16 23 C -0.10 -0.16 8.33 22.04 0.18 0.03 16 24 H 0.38 -1.60 8.70 -74.06 -0.64 -2.25 16 25 H 0.12 0.06 7.78 -2.39 -0.02 0.04 16 26 H -0.29 -1.56 7.11 99.48 0.71 -0.85 16 27 H -0.27 -0.26 6.66 99.48 0.66 0.40 16 28 H 0.05 0.11 7.87 -2.39 -0.02 0.09 16 29 H 0.07 0.20 5.93 -2.39 -0.01 0.18 16 30 H 0.08 -0.18 8.14 -2.39 -0.02 -0.20 16 31 H 0.08 0.02 7.92 -2.39 -0.02 0.00 16 32 H 0.40 -2.61 9.12 -74.05 -0.68 -3.28 16 33 H 0.08 0.17 8.10 -2.39 -0.02 0.15 16 34 H 0.08 -0.07 8.14 -2.39 -0.02 -0.09 16 35 H 0.14 0.14 7.62 -2.91 -0.02 0.12 16 36 H 0.15 -0.81 8.06 -2.91 -0.02 -0.83 16 37 H 0.15 -0.88 8.06 -2.91 -0.02 -0.91 16 38 H 0.14 -0.04 6.98 -2.91 -0.02 -0.06 16 39 H 0.15 -0.20 4.76 -2.91 -0.01 -0.21 16 Total: 0.00 -12.80 336.09 -0.50 -13.30 By element: Atomic # 1 Polarization: -7.91 SS G_CDS: -0.22 Total: -8.13 kcal Atomic # 6 Polarization: -0.59 SS G_CDS: 2.14 Total: 1.54 kcal Atomic # 8 Polarization: -2.99 SS G_CDS: -4.41 Total: -7.41 kcal Atomic # 14 Polarization: -1.19 SS G_CDS: 2.07 Total: 0.88 kcal Atomic # 17 Polarization: -0.12 SS G_CDS: -0.07 Total: -0.19 kcal Total: -12.80 -0.50 -13.30 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_8272892_11354858.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -30.741 kcal (2) G-P(sol) polarization free energy of solvation -12.804 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -43.544 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.499 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.302 kcal (6) G-S(sol) free energy of system = (1) + (5) -44.043 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds