Wall clock time and date at job start Mon Mar 8 2021 15:20:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53008 * 1 3 3 C 1.52995 * 109.46913 * 2 1 4 4 C 1.52994 * 109.46775 * 239.99874 * 2 1 3 5 5 O 1.42896 * 109.46780 * 119.99893 * 2 1 3 6 6 C 1.42898 * 114.00166 * 60.00294 * 5 2 1 7 7 H 1.08997 * 112.84798 * 18.79826 * 6 5 2 8 8 C 1.53785 * 113.61499 * 149.99291 * 6 5 2 9 9 C 1.53789 * 87.07823 * 139.98020 * 8 6 5 10 10 H 1.09000 * 113.60985 * 89.20367 * 9 8 6 11 11 C 1.52999 * 113.61374 * 220.01989 * 9 8 6 12 12 O 1.42901 * 109.47104 * 185.00161 * 11 9 8 13 13 C 1.35837 * 116.99844 * 179.97438 * 12 11 9 14 14 C 1.40943 * 120.21650 * 270.01958 * 13 12 11 15 15 C 1.40419 * 121.29365 * 0.02562 * 14 13 12 16 16 C 1.36127 * 119.66660 * 179.97438 * 15 14 13 17 17 C 1.39372 * 120.97476 * 0.02562 * 16 15 14 18 18 C 1.36102 * 120.97321 * 359.95755 * 17 16 15 19 19 C 1.40524 * 119.65389 * 359.80554 * 18 17 16 20 20 C 1.40612 * 121.26586 * 179.73676 * 19 18 17 21 21 Cl 1.73599 * 120.13081 * 0.47905 * 20 19 18 22 22 C 1.36275 * 119.74158 * 180.20021 * 20 19 18 23 23 C 1.36651 * 120.21086 * 90.00273 * 13 12 11 24 24 C 1.50696 * 119.53413 * 359.97438 * 23 13 12 25 25 O 1.42897 * 109.47207 * 285.02426 * 24 23 13 26 26 Si 1.86302 * 109.47268 * 165.02115 * 24 23 13 27 27 C 1.53776 * 87.08202 * 334.56735 * 9 8 6 28 28 H 1.09000 * 109.46535 * 299.99919 * 1 2 3 29 29 H 1.09001 * 109.46845 * 59.99563 * 1 2 3 30 30 H 1.08996 * 109.46883 * 180.02562 * 1 2 3 31 31 H 1.09006 * 109.47026 * 180.02562 * 3 2 1 32 32 H 1.09001 * 109.47722 * 299.99900 * 3 2 1 33 33 H 1.09001 * 109.47944 * 60.00052 * 3 2 1 34 34 H 1.08996 * 109.47511 * 299.99733 * 4 2 1 35 35 H 1.08999 * 109.47426 * 60.00023 * 4 2 1 36 36 H 1.09006 * 109.46824 * 179.97438 * 4 2 1 37 37 H 1.09000 * 113.61302 * 25.43948 * 8 6 5 38 38 H 1.08993 * 113.61518 * 254.53136 * 8 6 5 39 39 H 1.08996 * 109.47093 * 65.00083 * 11 9 8 40 40 H 1.09005 * 109.47364 * 304.99895 * 11 9 8 41 41 H 1.08003 * 120.16775 * 359.95541 * 15 14 13 42 42 H 1.07998 * 119.51430 * 179.97438 * 16 15 14 43 43 H 1.07999 * 119.50699 * 179.97438 * 17 16 15 44 44 H 1.08002 * 120.16933 * 180.02562 * 18 17 16 45 45 H 1.08005 * 119.47729 * 180.25686 * 22 20 19 46 46 H 1.09000 * 109.47238 * 45.02716 * 24 23 13 47 47 H 0.96699 * 113.99994 * 299.99382 * 25 24 23 48 48 H 1.48504 * 110.00033 * 58.68297 * 26 24 23 49 49 H 1.48495 * 110.00143 * 179.97438 * 26 24 23 50 50 H 1.09002 * 113.61467 * 139.97994 * 27 9 8 51 51 H 1.09000 * 113.62031 * 270.88373 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0063 -0.6736 1.1668 6 6 1.5847 -2.0355 1.2645 7 1 1.2523 -2.4451 0.3107 8 6 2.5838 -2.9379 2.0078 9 6 1.3667 -3.6119 2.6632 10 1 0.9746 -4.4541 2.0931 11 6 1.5712 -3.9402 4.1435 12 8 0.4399 -4.6640 4.6316 13 6 0.4623 -5.0355 5.9380 14 6 1.0126 -6.2777 6.3128 15 6 1.5477 -7.1565 5.3573 16 6 2.0713 -8.3480 5.7563 17 6 2.0845 -8.7112 7.1018 18 6 1.5750 -7.8845 8.0554 19 6 1.0305 -6.6442 7.6816 20 6 0.4901 -5.7663 8.6379 21 17 0.4967 -6.1982 10.3193 22 6 -0.0336 -4.5727 8.2403 23 6 -0.0482 -4.2069 6.8973 24 6 -0.6354 -2.8785 6.4956 25 8 0.4190 -1.9695 6.1733 26 14 -1.6386 -2.1908 7.9068 27 6 0.6077 -2.2963 2.4231 28 1 -0.3632 0.5138 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 -1.0276 0.0005 31 1 3.1301 1.4425 -0.0005 32 1 1.6767 1.9564 -0.8900 33 1 1.6767 1.9564 0.8899 34 1 1.6767 -1.7489 -1.2492 35 1 1.6766 -0.2075 -2.1392 36 1 3.1300 -0.7209 -1.2494 37 1 3.2172 -2.3998 2.7131 38 1 3.1478 -3.5992 1.3502 39 1 1.6821 -3.0149 4.7088 40 1 2.4690 -4.5473 4.2604 41 1 1.5436 -6.8887 4.3110 42 1 2.4819 -9.0223 5.0193 43 1 2.5055 -9.6625 7.3919 44 1 1.5922 -8.1788 9.0944 45 1 -0.4438 -3.8999 8.9789 46 1 -1.2776 -3.0134 5.6253 47 1 1.0307 -1.8020 6.9033 48 1 -0.7817 -2.0320 9.1092 49 1 -2.2227 -0.8804 7.5236 50 1 -0.4236 -2.4397 2.1007 51 1 0.7009 -1.5827 3.2418 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_8272892_14598384.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 15:20:25 Heat of formation + Delta-G solvation = -42.167944 kcal Electronic energy + Delta-G solvation = -33061.598370 eV Core-core repulsion = 28726.993808 eV Total energy + Delta-G solvation = -4334.604562 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 377.148 amu Computer time = 1.35 seconds Orbital eigenvalues (eV) -42.08743 -40.91386 -39.58062 -38.62059 -38.04852 -37.69970 -36.59202 -33.93029 -32.99811 -32.08416 -30.50984 -29.10763 -28.36327 -28.23559 -26.85618 -26.57440 -24.68060 -23.71241 -23.21144 -22.73976 -20.86016 -20.59407 -19.22539 -18.81484 -18.75263 -17.82035 -17.40899 -17.03527 -16.78004 -16.45753 -16.16125 -16.05143 -15.86911 -15.57606 -15.35286 -15.14031 -14.90028 -14.78975 -14.65885 -14.50470 -14.15548 -14.01299 -13.82335 -13.41573 -13.31570 -13.26414 -13.12641 -13.00440 -12.80606 -12.75872 -12.67171 -12.54313 -12.32868 -12.25304 -12.10852 -11.94141 -11.87529 -11.77797 -11.60166 -11.50101 -11.22917 -10.84689 -10.74082 -10.62723 -10.34610 -9.83917 -8.88129 -4.97960 -0.80138 -0.28598 0.73194 0.93882 1.22848 1.50817 1.60200 1.88322 2.38903 2.76322 2.89991 3.28067 3.43538 3.48483 3.52207 3.60507 3.76031 3.79282 3.84299 3.89446 3.90788 3.97863 4.02259 4.09329 4.11526 4.22717 4.31430 4.33481 4.38475 4.43474 4.48359 4.59452 4.61061 4.65367 4.70886 4.74741 4.76778 4.78994 4.84205 4.85068 4.90160 4.92937 4.94566 4.96191 5.02677 5.06764 5.11896 5.19301 5.29261 5.31830 5.32779 5.41353 5.44722 5.46015 5.82563 6.37773 6.41928 6.43591 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C 0.098 3.902 3 C -0.139 4.139 4 C -0.176 4.176 5 O -0.382 6.382 6 C 0.060 3.940 7 H 0.101 0.899 8 C -0.123 4.123 9 C -0.099 4.099 10 H 0.108 0.892 11 C 0.080 3.920 12 O -0.332 6.332 13 C 0.141 3.859 14 C -0.077 4.077 15 C -0.105 4.105 16 C -0.111 4.111 17 C -0.101 4.101 18 C -0.121 4.121 19 C -0.045 4.045 20 C -0.033 4.033 21 Cl -0.053 7.053 22 C -0.099 4.099 23 C -0.134 4.134 24 C -0.068 4.068 25 O -0.535 6.535 26 Si 0.757 3.243 27 C -0.142 4.142 28 H 0.054 0.946 29 H 0.076 0.924 30 H 0.060 0.940 31 H 0.058 0.942 32 H 0.084 0.916 33 H 0.055 0.945 34 H 0.063 0.937 35 H 0.077 0.923 36 H 0.060 0.940 37 H 0.083 0.917 38 H 0.088 0.912 39 H 0.070 0.930 40 H 0.054 0.946 41 H 0.140 0.860 42 H 0.151 0.849 43 H 0.152 0.848 44 H 0.142 0.858 45 H 0.152 0.848 46 H 0.120 0.880 47 H 0.383 0.617 48 H -0.272 1.272 49 H -0.294 1.294 50 H 0.068 0.932 51 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.147 -2.644 -2.171 3.424 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.230 4.230 2 C 0.059 3.941 3 C -0.197 4.197 4 C -0.233 4.233 5 O -0.302 6.302 6 C 0.003 3.997 7 H 0.118 0.882 8 C -0.160 4.160 9 C -0.118 4.118 10 H 0.126 0.874 11 C 0.007 3.993 12 O -0.249 6.249 13 C 0.097 3.903 14 C -0.078 4.078 15 C -0.123 4.123 16 C -0.128 4.128 17 C -0.119 4.119 18 C -0.138 4.138 19 C -0.046 4.046 20 C -0.060 4.060 21 Cl -0.024 7.024 22 C -0.117 4.117 23 C -0.135 4.135 24 C -0.177 4.177 25 O -0.343 6.343 26 Si 0.661 3.339 27 C -0.180 4.180 28 H 0.073 0.927 29 H 0.095 0.905 30 H 0.079 0.921 31 H 0.078 0.922 32 H 0.103 0.897 33 H 0.074 0.926 34 H 0.082 0.918 35 H 0.096 0.904 36 H 0.079 0.921 37 H 0.102 0.898 38 H 0.106 0.894 39 H 0.088 0.912 40 H 0.072 0.928 41 H 0.158 0.842 42 H 0.169 0.831 43 H 0.170 0.830 44 H 0.160 0.840 45 H 0.170 0.830 46 H 0.138 0.862 47 H 0.232 0.768 48 H -0.198 1.198 49 H -0.222 1.222 50 H 0.087 0.913 51 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -0.266 -1.961 -2.036 2.839 hybrid contribution 1.054 0.310 0.268 1.131 sum 0.788 -1.650 -1.769 2.544 Atomic orbital electron populations 1.22438 0.95114 1.02646 1.02848 1.21670 0.93597 0.93386 0.85427 1.21793 1.01679 0.93322 1.02866 1.22441 1.01945 1.01130 0.97807 1.88016 1.74221 1.24239 1.43728 1.23683 0.95873 0.82256 0.97901 0.88177 1.23179 0.96287 0.97248 0.99298 1.22242 0.98119 0.97664 0.93757 0.87418 1.22954 0.86346 0.95524 0.94521 1.85901 1.43321 1.74497 1.21200 1.18270 0.96385 0.91385 0.84271 1.18417 1.00669 0.95823 0.92879 1.21133 0.97569 0.94091 0.99467 1.21307 0.98119 0.96536 0.96880 1.21316 0.97406 1.00461 0.92733 1.21295 0.98520 0.92714 1.01302 1.17876 0.99797 0.95575 0.91346 1.20666 1.03631 0.96099 0.85617 1.98383 1.97149 1.93068 1.13778 1.20718 0.99466 0.95874 0.95636 1.20156 1.03234 0.98073 0.92047 1.25018 0.94335 0.86926 1.11449 1.86618 1.41295 1.64470 1.41887 0.93971 0.83839 0.81882 0.74199 1.23508 0.98796 0.96618 0.99046 0.92733 0.90520 0.92092 0.92249 0.89694 0.92625 0.91784 0.90393 0.92136 0.89833 0.89372 0.91161 0.92767 0.84234 0.83081 0.82997 0.84031 0.83049 0.86182 0.76757 1.19792 1.22180 0.91322 0.90342 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.06 8.38 71.98 0.60 0.54 16 2 C 0.10 0.17 1.11 -10.79 -0.01 0.16 16 3 C -0.14 -0.14 8.84 71.98 0.64 0.50 16 4 C -0.18 0.16 8.38 71.98 0.60 0.77 16 5 O -0.38 -2.09 10.00 -148.98 -1.49 -3.58 16 6 C 0.06 0.09 2.82 31.12 0.09 0.18 16 7 H 0.10 -0.09 5.54 -2.39 -0.01 -0.10 16 8 C -0.12 0.01 7.47 31.12 0.23 0.24 16 9 C -0.10 -0.01 4.01 -10.27 -0.04 -0.05 16 10 H 0.11 -0.14 8.14 -2.39 -0.02 -0.16 16 11 C 0.08 0.15 5.83 71.98 0.42 0.57 16 12 O -0.33 -1.46 8.52 -91.72 -0.78 -2.24 16 13 C 0.14 0.65 5.67 22.56 0.13 0.77 16 14 C -0.08 -0.36 5.75 -21.23 -0.12 -0.48 16 15 C -0.10 -0.20 9.56 22.31 0.21 0.02 16 16 C -0.11 0.11 9.95 22.05 0.22 0.33 16 17 C -0.10 0.10 9.95 22.05 0.22 0.32 16 18 C -0.12 -0.22 9.44 22.33 0.21 -0.01 16 19 C -0.05 -0.20 5.74 -21.29 -0.12 -0.32 16 20 C -0.03 -0.12 6.32 22.39 0.14 0.02 16 21 Cl -0.05 -0.13 27.50 -2.72 -0.07 -0.21 16 22 C -0.10 -0.20 8.33 22.04 0.18 -0.01 16 23 C -0.13 -0.34 5.24 -20.01 -0.10 -0.45 16 24 C -0.07 -0.07 2.32 71.23 0.17 0.09 16 25 O -0.53 -1.17 10.71 -148.98 -1.60 -2.76 16 26 Si 0.76 -0.50 30.21 68.60 2.07 1.57 16 27 C -0.14 -0.33 7.46 31.12 0.23 -0.10 16 28 H 0.05 0.14 8.14 -2.39 -0.02 0.12 16 29 H 0.08 -0.15 8.14 -2.39 -0.02 -0.17 16 30 H 0.06 -0.01 7.02 -2.39 -0.02 -0.02 16 31 H 0.06 0.10 8.14 -2.38 -0.02 0.08 16 32 H 0.08 -0.19 8.14 -2.39 -0.02 -0.21 16 33 H 0.05 0.14 8.14 -2.39 -0.02 0.12 16 34 H 0.06 -0.12 6.24 -2.39 -0.01 -0.14 16 35 H 0.08 -0.23 8.14 -2.39 -0.02 -0.25 16 36 H 0.06 0.01 8.14 -2.38 -0.02 -0.01 16 37 H 0.08 0.16 8.10 -2.39 -0.02 0.14 16 38 H 0.09 -0.23 8.14 -2.39 -0.02 -0.25 16 39 H 0.07 0.25 5.63 -2.39 -0.01 0.24 16 40 H 0.05 0.06 8.14 -2.38 -0.02 0.04 16 41 H 0.14 0.00 7.62 -2.91 -0.02 -0.02 16 42 H 0.15 -0.90 8.06 -2.91 -0.02 -0.93 16 43 H 0.15 -0.91 8.06 -2.91 -0.02 -0.93 16 44 H 0.14 -0.03 6.98 -2.91 -0.02 -0.05 16 45 H 0.15 -0.11 4.76 -2.91 -0.01 -0.12 16 46 H 0.12 0.21 7.78 -2.39 -0.02 0.19 16 47 H 0.38 -1.16 8.70 -74.06 -0.64 -1.81 16 48 H -0.27 -0.48 6.66 99.48 0.66 0.18 16 49 H -0.29 -1.88 7.11 99.48 0.71 -1.17 16 50 H 0.07 0.14 8.14 -2.39 -0.02 0.12 16 51 H 0.08 0.49 7.90 -2.39 -0.02 0.47 16 Total: 0.00 -11.09 415.22 2.32 -8.77 By element: Atomic # 1 Polarization: -4.93 SS G_CDS: 0.29 Total: -4.63 kcal Atomic # 6 Polarization: -0.81 SS G_CDS: 3.89 Total: 3.09 kcal Atomic # 8 Polarization: -4.72 SS G_CDS: -3.87 Total: -8.58 kcal Atomic # 14 Polarization: -0.50 SS G_CDS: 2.07 Total: 1.57 kcal Atomic # 17 Polarization: -0.13 SS G_CDS: -0.07 Total: -0.21 kcal Total: -11.09 2.32 -8.77 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_8272892_14598384.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.400 kcal (2) G-P(sol) polarization free energy of solvation -11.086 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.487 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.319 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -8.768 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.168 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.35 seconds