Wall clock time and date at job start Mon Mar 8 2021 16:53:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42895 * 114.00046 * 2 1 4 4 C 1.53010 * 112.90505 * 294.07598 * 3 2 1 5 5 F 1.39899 * 109.46817 * 195.62673 * 4 3 2 6 6 F 1.39898 * 109.46321 * 315.61929 * 4 3 2 7 7 F 1.39890 * 109.47215 * 75.61992 * 4 3 2 8 8 C 1.53775 * 113.61926 * 162.82395 * 3 2 1 9 9 C 1.53782 * 87.07844 * 270.88206 * 8 3 2 10 10 H 1.09013 * 113.69142 * 220.00516 * 9 8 3 11 11 C 1.52997 * 113.61645 * 89.11679 * 9 8 3 12 12 O 1.42901 * 109.47320 * 87.50345 * 11 9 8 13 13 C 1.35838 * 116.99833 * 180.02562 * 12 11 9 14 14 C 1.40949 * 120.21611 * 89.99870 * 13 12 11 15 15 C 1.40427 * 121.28072 * 0.27510 * 14 13 12 16 16 C 1.36128 * 119.66063 * 179.78225 * 15 14 13 17 17 C 1.39353 * 120.97602 * 359.92229 * 16 15 14 18 18 C 1.36106 * 120.97856 * 0.06109 * 17 16 15 19 19 C 1.40523 * 119.65528 * 359.97438 * 18 17 16 20 20 C 1.40605 * 121.28522 * 180.02562 * 19 18 17 21 21 Cl 1.73605 * 120.12636 * 359.97438 * 20 19 18 22 22 C 1.36271 * 119.75108 * 179.97438 * 20 19 18 23 23 C 1.36645 * 120.21596 * 270.44365 * 13 12 11 24 24 C 1.50700 * 119.53352 * 359.78434 * 23 13 12 25 25 O 1.42910 * 109.46889 * 75.19486 * 24 23 13 26 26 Si 1.86294 * 109.47707 * 195.19369 * 24 23 13 27 27 C 1.53778 * 87.08243 * 334.56364 * 9 8 3 28 28 H 1.09000 * 109.46721 * 63.00326 * 1 2 3 29 29 H 1.09005 * 109.47048 * 182.99622 * 1 2 3 30 30 H 1.08999 * 109.47518 * 303.00223 * 1 2 3 31 31 H 1.08992 * 113.61806 * 156.33455 * 8 3 2 32 32 H 1.08996 * 113.61372 * 25.42517 * 8 3 2 33 33 H 1.08999 * 109.47281 * 327.50092 * 11 9 8 34 34 H 1.08998 * 109.46972 * 207.50035 * 11 9 8 35 35 H 1.08003 * 120.16618 * 359.70089 * 15 14 13 36 36 H 1.08004 * 119.50958 * 179.97438 * 16 15 14 37 37 H 1.08004 * 119.51048 * 180.02562 * 17 16 15 38 38 H 1.08009 * 120.17482 * 180.02562 * 18 17 16 39 39 H 1.07995 * 119.48200 * 180.02562 * 22 20 19 40 40 H 1.08997 * 109.47374 * 315.19962 * 24 23 13 41 41 H 0.96696 * 113.99936 * 60.00382 * 25 24 23 42 42 H 1.48493 * 110.00436 * 180.02562 * 26 24 23 43 43 H 1.48499 * 110.00065 * 301.32554 * 26 24 23 44 44 H 1.08996 * 113.61592 * 139.98016 * 27 9 8 45 45 H 1.09004 * 113.61860 * 270.88594 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 1.7272 2.0833 -1.2868 5 9 2.5974 3.1753 -1.3725 6 9 1.9205 1.2453 -2.3902 7 9 0.4051 2.5403 -1.2742 8 6 3.4905 1.3207 0.4161 9 6 3.0002 1.4809 1.8648 10 1 3.5973 2.1764 2.4549 11 6 2.7580 0.1506 2.5805 12 8 3.9739 -0.2927 3.1865 13 6 3.9313 -1.4677 3.8667 14 6 4.1981 -2.6819 3.2024 15 6 4.5177 -2.7101 1.8352 16 6 4.7739 -3.9011 1.2278 17 6 4.7256 -5.0961 1.9430 18 6 4.4197 -5.1069 3.2692 19 6 4.1486 -3.8968 3.9301 20 6 3.8294 -3.8681 5.2992 21 17 3.7630 -5.3448 6.2095 22 6 3.5725 -2.6767 5.9088 23 6 3.6205 -1.4813 5.1972 24 6 3.3303 -0.1832 5.9056 25 8 2.0282 0.2783 5.5396 26 14 3.3987 -0.4520 7.7477 27 6 1.7233 2.1075 1.2803 28 1 -0.3633 0.4665 -0.9157 29 1 -0.3633 -1.0263 0.0537 30 1 -0.3634 0.5597 0.8618 31 1 4.0400 2.1849 0.0430 32 1 4.0058 0.3782 0.2313 33 1 2.4190 -0.5934 1.8597 34 1 1.9969 0.2849 3.3492 35 1 4.5587 -1.7917 1.2684 36 1 5.0190 -3.9200 0.1761 37 1 4.9334 -6.0276 1.4374 38 1 4.3864 -6.0406 3.8111 39 1 3.3283 -2.6597 6.9606 40 1 4.0732 0.5611 5.6191 41 1 1.3157 -0.3353 5.7652 42 1 3.1136 0.8207 8.4577 43 1 2.4123 -1.4877 8.1469 44 1 0.8119 1.8002 1.7931 45 1 1.7897 3.1869 1.1434 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_8272892_17321600.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 16:53:57 Heat of formation + Delta-G solvation = -174.198397 kcal Electronic energy + Delta-G solvation = -37857.696933 eV Core-core repulsion = 32420.080412 eV Total energy + Delta-G solvation = -5437.616521 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 403.088 amu Computer time = 1.38 seconds Orbital eigenvalues (eV) -51.26660 -48.80202 -48.73630 -42.12695 -41.34643 -39.44268 -38.40686 -37.76020 -37.09428 -36.52648 -33.03424 -32.06420 -30.84052 -29.81519 -28.20111 -27.33097 -26.80328 -26.58707 -24.62363 -23.38335 -23.18629 -22.76024 -20.62582 -19.84853 -19.56419 -19.30137 -19.08757 -18.77885 -18.72987 -17.42501 -17.22406 -16.97218 -16.63289 -16.42354 -16.26705 -15.93534 -15.68834 -15.65958 -15.62879 -15.51063 -15.34383 -15.17621 -15.01235 -14.91602 -14.90730 -14.83467 -14.61204 -14.33018 -14.14539 -13.95801 -13.74837 -13.34196 -13.22378 -13.13699 -12.76900 -12.65445 -12.52586 -12.24645 -12.22516 -11.99939 -11.90272 -11.84174 -11.64701 -11.59684 -11.09530 -10.72431 -10.66375 -10.59753 -9.81582 -8.85854 -4.93648 -0.77876 -0.26147 0.75556 0.96343 1.26483 1.52549 1.54511 1.62126 1.91458 2.07840 2.37569 2.56659 2.63030 2.88530 2.92618 3.29005 3.33255 3.43529 3.46567 3.49707 3.52754 3.76068 3.85974 3.92338 4.06690 4.14991 4.23260 4.25322 4.33223 4.36305 4.36425 4.44997 4.45975 4.52698 4.61444 4.64130 4.69115 4.75095 4.79335 4.79488 4.86210 4.95672 5.00395 5.04351 5.12836 5.33343 5.44317 5.48893 5.70257 5.84337 6.40175 6.44914 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.006 3.994 2 O -0.342 6.342 3 C 0.038 3.962 4 C 0.432 3.568 5 F -0.176 7.176 6 F -0.187 7.187 7 F -0.186 7.186 8 C -0.112 4.112 9 C -0.090 4.090 10 H 0.110 0.890 11 C 0.079 3.921 12 O -0.331 6.331 13 C 0.145 3.855 14 C -0.076 4.076 15 C -0.101 4.101 16 C -0.113 4.113 17 C -0.101 4.101 18 C -0.121 4.121 19 C -0.044 4.044 20 C -0.033 4.033 21 Cl -0.054 7.054 22 C -0.098 4.098 23 C -0.133 4.133 24 C -0.067 4.067 25 O -0.535 6.535 26 Si 0.754 3.246 27 C -0.136 4.136 28 H 0.045 0.955 29 H 0.110 0.890 30 H 0.067 0.933 31 H 0.123 0.877 32 H 0.093 0.907 33 H 0.066 0.934 34 H 0.077 0.923 35 H 0.137 0.863 36 H 0.147 0.853 37 H 0.150 0.850 38 H 0.142 0.858 39 H 0.153 0.847 40 H 0.125 0.875 41 H 0.384 0.616 42 H -0.294 1.294 43 H -0.273 1.273 44 H 0.100 0.900 45 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.338 -1.005 1.417 1.770 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 O -0.260 6.260 3 C -0.004 4.004 4 C 0.378 3.622 5 F -0.158 7.158 6 F -0.169 7.169 7 F -0.167 7.167 8 C -0.149 4.149 9 C -0.108 4.108 10 H 0.128 0.872 11 C 0.005 3.995 12 O -0.248 6.248 13 C 0.100 3.900 14 C -0.076 4.076 15 C -0.118 4.118 16 C -0.130 4.130 17 C -0.119 4.119 18 C -0.139 4.139 19 C -0.045 4.045 20 C -0.060 4.060 21 Cl -0.025 7.025 22 C -0.117 4.117 23 C -0.134 4.134 24 C -0.176 4.176 25 O -0.343 6.343 26 Si 0.659 3.341 27 C -0.173 4.173 28 H 0.064 0.936 29 H 0.129 0.871 30 H 0.085 0.915 31 H 0.141 0.859 32 H 0.112 0.888 33 H 0.084 0.916 34 H 0.095 0.905 35 H 0.155 0.845 36 H 0.165 0.835 37 H 0.168 0.832 38 H 0.159 0.841 39 H 0.170 0.830 40 H 0.143 0.857 41 H 0.233 0.767 42 H -0.221 1.221 43 H -0.200 1.200 44 H 0.119 0.881 45 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges 0.473 -0.639 1.966 2.120 hybrid contribution -1.611 -0.112 -0.915 1.856 sum -1.138 -0.751 1.051 1.722 Atomic orbital electron populations 1.23246 0.78969 1.05094 1.01665 1.88072 1.21823 1.22330 1.93813 1.24160 1.00663 0.86220 0.89379 1.21538 0.74080 0.78753 0.87850 1.93171 1.69594 1.56352 1.96650 1.93186 1.94787 1.71419 1.57472 1.93175 1.36782 1.89889 1.96866 1.23331 0.90360 1.05735 0.95458 1.22001 0.97452 0.96432 0.94936 0.87220 1.22871 0.85014 0.95047 0.96531 1.85857 1.34575 1.34800 1.69615 1.18211 0.97007 0.84741 0.90002 1.18406 1.02468 0.91729 0.95041 1.21099 0.98460 0.99576 0.92714 1.21272 0.98288 0.91969 1.01515 1.21286 0.97091 0.99533 0.94006 1.21283 0.99896 0.96962 0.95729 1.17858 1.00842 0.94033 0.91769 1.20665 1.05288 0.88351 0.91713 1.98384 1.96730 1.34191 1.73209 1.20721 0.99927 0.89908 1.01102 1.20156 1.03253 0.95731 0.94309 1.25000 0.87368 0.94859 1.10394 1.86589 1.15595 1.48839 1.83249 0.93881 0.89957 0.77752 0.72525 1.23612 0.99939 1.01328 0.92432 0.93605 0.87134 0.91466 0.85871 0.88822 0.91633 0.90465 0.84497 0.83482 0.83188 0.84075 0.83029 0.85738 0.76653 1.22102 1.19976 0.88138 0.86149 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.33 113.37 1.17 1.16 16 2 O -0.34 -0.19 8.37 -148.98 -1.25 -1.44 16 3 C 0.04 -0.04 0.84 -10.27 -0.01 -0.04 16 4 C 0.43 1.11 2.52 71.99 0.18 1.29 16 5 F -0.18 -0.45 15.80 44.97 0.71 0.26 16 6 F -0.19 -1.17 17.11 44.97 0.77 -0.40 16 7 F -0.19 -0.61 15.33 44.97 0.69 0.07 16 8 C -0.11 0.30 6.89 31.12 0.21 0.51 16 9 C -0.09 0.29 4.20 -10.27 -0.04 0.25 16 10 H 0.11 -0.43 8.14 -2.38 -0.02 -0.45 16 11 C 0.08 -0.05 5.57 71.98 0.40 0.35 16 12 O -0.33 -0.73 8.52 -91.73 -0.78 -1.51 16 13 C 0.14 0.42 5.67 22.56 0.13 0.55 16 14 C -0.08 -0.29 5.75 -21.23 -0.12 -0.41 16 15 C -0.10 -0.20 9.56 22.31 0.21 0.02 16 16 C -0.11 0.05 9.95 22.05 0.22 0.27 16 17 C -0.10 0.07 9.95 22.04 0.22 0.29 16 18 C -0.12 -0.19 9.44 22.33 0.21 0.02 16 19 C -0.04 -0.16 5.74 -21.29 -0.12 -0.29 16 20 C -0.03 -0.09 6.32 22.39 0.14 0.05 16 21 Cl -0.05 -0.10 27.50 -2.72 -0.07 -0.17 16 22 C -0.10 -0.05 8.33 22.04 0.18 0.13 16 23 C -0.13 -0.08 5.24 -20.01 -0.10 -0.19 16 24 C -0.07 0.10 2.32 71.24 0.17 0.27 16 25 O -0.53 0.63 10.68 -148.98 -1.59 -0.96 16 26 Si 0.75 -1.95 30.21 68.60 2.07 0.12 16 27 C -0.14 0.58 6.52 31.12 0.20 0.78 16 28 H 0.05 -0.04 6.56 -2.39 -0.02 -0.06 16 29 H 0.11 -0.55 8.14 -2.38 -0.02 -0.57 16 30 H 0.07 -0.35 6.60 -2.39 -0.02 -0.37 16 31 H 0.12 -0.54 7.02 -2.39 -0.02 -0.56 16 32 H 0.09 -0.18 8.10 -2.39 -0.02 -0.20 16 33 H 0.07 0.05 6.12 -2.39 -0.01 0.04 16 34 H 0.08 -0.04 5.89 -2.39 -0.01 -0.05 16 35 H 0.14 0.09 7.62 -2.91 -0.02 0.06 16 36 H 0.15 -0.69 8.06 -2.91 -0.02 -0.71 16 37 H 0.15 -0.82 8.06 -2.91 -0.02 -0.85 16 38 H 0.14 -0.06 6.99 -2.91 -0.02 -0.08 16 39 H 0.15 -0.33 4.75 -2.91 -0.01 -0.34 16 40 H 0.12 -0.18 7.77 -2.39 -0.02 -0.20 16 41 H 0.38 -2.42 8.70 -74.06 -0.64 -3.07 16 42 H -0.29 -1.28 7.11 99.48 0.71 -0.58 16 43 H -0.27 -0.03 6.66 99.48 0.66 0.63 16 44 H 0.10 -0.55 6.64 -2.39 -0.02 -0.57 16 45 H 0.12 -0.72 8.03 -2.39 -0.02 -0.74 16 Total: 0.00 -11.92 385.63 4.23 -7.69 By element: Atomic # 1 Polarization: -9.09 SS G_CDS: 0.43 Total: -8.66 kcal Atomic # 6 Polarization: 1.75 SS G_CDS: 3.25 Total: 5.00 kcal Atomic # 8 Polarization: -0.30 SS G_CDS: -3.62 Total: -3.91 kcal Atomic # 9 Polarization: -2.23 SS G_CDS: 2.17 Total: -0.06 kcal Atomic # 14 Polarization: -1.95 SS G_CDS: 2.07 Total: 0.12 kcal Atomic # 17 Polarization: -0.10 SS G_CDS: -0.07 Total: -0.17 kcal Total: -11.92 4.23 -7.69 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_8272892_17321600.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -166.510 kcal (2) G-P(sol) polarization free energy of solvation -11.922 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -178.432 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.233 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -7.689 kcal (6) G-S(sol) free energy of system = (1) + (5) -174.198 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.38 seconds