Wall clock time and date at job start Tue Mar 9 2021 12:51:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86305 * 109.46830 * 2 1 4 4 C 1.50699 * 109.46945 * 119.99541 * 2 1 3 5 5 C 1.34543 * 120.20556 * 250.00195 * 4 2 1 6 6 O 1.33718 * 122.85057 * 179.97438 * 5 4 2 7 7 C 1.34876 * 122.41417 * 0.02562 * 6 5 4 8 8 C 1.40425 * 119.67639 * 359.97438 * 7 6 5 9 9 C 1.39386 * 120.23786 * 179.97438 * 8 7 6 10 10 C 1.37845 * 119.52619 * 359.97438 * 9 8 7 11 11 Br 1.89103 * 119.86545 * 179.97438 * 10 9 8 12 12 C 1.38836 * 120.27791 * 0.02562 * 10 9 8 13 13 C 1.37835 * 120.70129 * 359.97438 * 12 10 9 14 14 C 1.50693 * 120.03935 * 179.97438 * 13 12 10 15 15 O 1.45205 * 109.47359 * 0.02562 * 14 13 12 16 16 C 1.34230 * 117.00035 * 179.97438 * 15 14 13 17 17 O 1.20825 * 120.00142 * 0.02562 * 16 15 14 18 18 C 1.50695 * 119.99926 * 179.97438 * 16 15 14 19 19 H 1.09000 * 112.85100 * 311.19771 * 18 16 15 20 20 C 1.53786 * 113.61330 * 82.50265 * 18 16 15 21 21 C 1.53782 * 87.08076 * 139.98327 * 20 18 16 22 22 H 1.08997 * 113.69306 * 89.12699 * 21 20 18 23 23 O 1.42901 * 113.61457 * 220.02270 * 21 20 18 24 24 C 1.42894 * 114.00009 * 247.49433 * 23 21 20 25 25 F 1.39907 * 109.47406 * 300.00177 * 24 23 21 26 26 F 1.39903 * 109.47154 * 59.99878 * 24 23 21 27 27 C 1.53783 * 87.08272 * 334.56772 * 21 20 18 28 28 C 1.42005 * 120.20466 * 70.26584 * 4 2 1 29 29 O 1.21915 * 121.40576 * 359.74236 * 28 4 2 30 30 H 0.96696 * 113.99740 * 60.00445 * 1 2 3 31 31 H 1.08993 * 109.47158 * 239.99554 * 2 1 3 32 32 H 1.48497 * 110.00315 * 59.99651 * 3 2 1 33 33 H 1.48499 * 109.99803 * 181.31644 * 3 2 1 34 34 H 1.07997 * 118.57117 * 359.97438 * 5 4 2 35 35 H 1.08002 * 120.23734 * 179.97438 * 9 8 7 36 36 H 1.08004 * 119.65431 * 179.97438 * 12 10 9 37 37 H 1.09008 * 109.47342 * 120.02530 * 14 13 12 38 38 H 1.09002 * 109.47482 * 240.02471 * 14 13 12 39 39 H 1.08995 * 113.61472 * 254.53014 * 20 18 16 40 40 H 1.09003 * 113.61069 * 25.43572 * 20 18 16 41 41 H 1.09001 * 109.47256 * 179.97438 * 24 23 21 42 42 H 1.08998 * 113.61883 * 270.88941 * 27 21 20 43 43 H 1.09000 * 113.61897 * 139.97773 * 27 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 2.5318 -0.0168 2.2147 6 8 2.9965 -0.5926 3.3285 7 6 2.8987 -1.9192 3.5515 8 6 2.2895 -2.7426 2.5909 9 6 2.1826 -4.1151 2.8090 10 6 2.6798 -4.6585 3.9742 11 35 2.5394 -6.5193 4.2804 12 6 3.2823 -3.8453 4.9245 13 6 3.3935 -2.4868 4.7196 14 6 4.0498 -1.6179 5.7613 15 8 4.4784 -2.4411 6.8781 16 6 5.0864 -1.8155 7.8982 17 8 5.2545 -0.6196 7.8596 18 6 5.5582 -2.6045 9.0923 19 1 4.7948 -3.2766 9.4840 20 6 6.9259 -3.2766 8.8851 21 6 7.2501 -2.8849 10.3364 22 1 6.9509 -3.6339 11.0696 23 8 8.5933 -2.4333 10.5210 24 6 9.3985 -3.3114 11.3099 25 9 8.8308 -3.4487 12.5812 26 9 9.4656 -4.5644 10.6914 27 6 6.2334 -1.7428 10.1724 28 6 1.7787 -2.1166 1.3560 29 8 1.2399 -2.7774 0.4846 30 1 -0.3933 0.4416 -0.7651 31 1 1.7923 -0.5139 -0.8899 32 1 1.5614 2.4680 1.2084 33 1 3.5345 1.7704 -0.0321 34 1 2.6434 1.0513 2.1001 35 1 1.7137 -4.7483 2.0704 36 1 3.6681 -4.2816 5.8341 37 1 4.9150 -1.1183 5.3252 38 1 3.3378 -0.8711 6.1126 39 1 6.8638 -4.3532 8.7270 40 1 7.5517 -2.7747 8.1472 41 1 10.4029 -2.8982 11.4028 42 1 6.6698 -0.8217 9.7863 43 1 5.6122 -1.5813 11.0534 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_1458_13600068_484008.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:51:23 Heat of formation + Delta-G solvation = -240.826429 kcal Electronic energy + Delta-G solvation = -36568.510668 eV Core-core repulsion = 30844.243225 eV Total energy + Delta-G solvation = -5724.267443 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 461.014 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -50.03632 -48.15681 -43.47379 -42.06234 -40.33796 -40.26550 -39.74818 -37.92941 -37.73535 -36.89767 -34.82814 -33.81818 -33.27009 -30.81627 -29.15289 -27.68628 -27.53377 -26.91489 -26.23911 -25.75289 -24.41625 -22.97776 -22.37030 -21.01937 -20.66836 -19.89706 -19.62044 -18.91434 -18.69638 -18.64073 -18.59949 -18.42152 -17.96647 -17.62477 -17.48489 -16.89185 -16.55803 -16.47224 -16.32481 -15.82044 -15.71017 -15.56976 -15.37368 -15.27821 -15.05199 -14.98525 -14.71886 -14.63134 -14.48872 -14.22254 -14.09320 -13.86815 -13.78843 -13.61539 -13.38329 -13.19493 -12.90221 -12.76014 -12.48437 -12.37392 -12.29835 -12.22923 -12.04543 -11.91193 -11.56921 -11.51677 -11.25841 -11.18662 -10.81970 -10.51832 -10.32993 -9.68329 -5.01198 -0.97454 -0.81342 -0.10910 0.26751 0.82576 0.97565 1.15592 1.24155 1.29411 1.61566 1.76812 2.07352 2.15921 2.56384 2.72713 2.78447 2.99338 3.09656 3.12796 3.24426 3.44176 3.46595 3.51483 3.64604 3.67207 3.70715 3.82270 3.84834 3.90808 3.91594 3.95155 4.01482 4.12937 4.18864 4.21677 4.50549 4.51902 4.55909 4.57043 4.62081 4.68140 4.79731 4.85758 4.92361 4.94234 5.18860 5.59321 5.61001 6.17714 6.52507 6.82750 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.567 6.567 2 C -0.072 4.072 3 Si 0.781 3.219 4 C -0.292 4.292 5 C 0.149 3.851 6 O -0.206 6.206 7 C 0.160 3.840 8 C -0.227 4.227 9 C -0.005 4.005 10 C -0.119 4.119 11 Br -0.018 7.018 12 C -0.004 4.004 13 C -0.098 4.098 14 C 0.117 3.883 15 O -0.347 6.347 16 C 0.481 3.519 17 O -0.528 6.528 18 C -0.102 4.102 19 H 0.163 0.837 20 C -0.129 4.129 21 C 0.047 3.953 22 H 0.118 0.882 23 O -0.382 6.382 24 C 0.399 3.601 25 F -0.219 7.219 26 F -0.217 7.217 27 C -0.115 4.115 28 C 0.426 3.574 29 O -0.484 6.484 30 H 0.403 0.597 31 H 0.075 0.925 32 H -0.261 1.261 33 H -0.265 1.265 34 H 0.220 0.780 35 H 0.150 0.850 36 H 0.180 0.820 37 H 0.099 0.901 38 H 0.099 0.901 39 H 0.107 0.893 40 H 0.089 0.911 41 H 0.205 0.795 42 H 0.091 0.909 43 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.671 3.379 1.324 4.506 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.377 6.377 2 C -0.179 4.179 3 Si 0.680 3.320 4 C -0.295 4.295 5 C 0.084 3.916 6 O -0.109 6.109 7 C 0.114 3.886 8 C -0.230 4.230 9 C -0.025 4.025 10 C -0.199 4.199 11 Br 0.067 6.933 12 C -0.023 4.023 13 C -0.100 4.100 14 C 0.044 3.956 15 O -0.264 6.264 16 C 0.325 3.675 17 O -0.417 6.417 18 C -0.121 4.121 19 H 0.180 0.820 20 C -0.167 4.167 21 C -0.010 4.010 22 H 0.136 0.864 23 O -0.304 6.304 24 C 0.308 3.692 25 F -0.201 7.201 26 F -0.199 7.199 27 C -0.153 4.153 28 C 0.311 3.689 29 O -0.366 6.366 30 H 0.254 0.746 31 H 0.093 0.907 32 H -0.187 1.187 33 H -0.191 1.191 34 H 0.235 0.765 35 H 0.168 0.832 36 H 0.198 0.802 37 H 0.117 0.883 38 H 0.117 0.883 39 H 0.125 0.875 40 H 0.108 0.892 41 H 0.221 0.779 42 H 0.109 0.891 43 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges 3.097 3.214 2.023 4.900 hybrid contribution -0.434 -0.576 -0.384 0.817 sum 2.663 2.638 1.639 4.091 Atomic orbital electron populations 1.86446 1.17472 1.82845 1.50944 1.24801 0.86023 1.12278 0.94837 0.93046 0.78470 0.73815 0.86647 1.21279 1.11015 0.95977 1.01204 1.24119 0.88206 0.98087 0.81237 1.83125 1.68680 1.21136 1.38003 1.18983 0.95581 0.80260 0.93760 1.20719 1.08311 0.95596 0.98385 1.21142 0.92852 0.92918 0.95559 1.21881 1.06899 0.93182 0.97930 1.96850 1.97444 1.02777 1.96196 1.21269 0.91891 0.90588 0.98581 1.18835 1.03803 0.94224 0.93123 1.21536 1.00126 0.90798 0.83182 1.86407 1.69583 1.42160 1.28244 1.23821 0.73309 0.86925 0.83437 1.90712 1.53635 1.17440 1.79890 1.22409 0.99414 0.99419 0.90813 0.81959 1.23449 0.92972 1.03180 0.97096 1.23933 0.80698 0.98451 0.97924 0.86446 1.88498 1.24162 1.47224 1.70481 1.23800 0.96366 0.76507 0.72523 1.93059 1.87920 1.95957 1.43128 1.93070 1.97009 1.46685 1.83182 1.23230 0.95765 0.97786 0.98479 1.18667 0.76531 0.88816 0.84845 1.90720 1.36538 1.67328 1.42004 0.74575 0.90686 1.18669 1.19078 0.76497 0.83190 0.80229 0.88319 0.88285 0.87453 0.89215 0.77929 0.89081 0.87910 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -1.79 12.86 -148.98 -1.92 -3.70 16 2 C -0.07 -0.09 2.45 71.24 0.17 0.09 16 3 Si 0.78 -5.11 30.02 68.60 2.06 -3.05 16 4 C -0.29 -1.59 5.35 -19.78 -0.11 -1.70 16 5 C 0.15 0.08 9.99 66.97 0.67 0.75 16 6 O -0.21 -0.22 9.21 -2.69 -0.02 -0.24 16 7 C 0.16 0.48 6.74 22.98 0.15 0.64 16 8 C -0.23 -1.56 5.89 -20.01 -0.12 -1.68 16 9 C 0.00 -0.03 9.40 22.45 0.21 0.19 16 10 C -0.12 -0.25 6.22 22.32 0.14 -0.11 16 11 Br -0.02 -0.02 33.69 -20.37 -0.69 -0.71 16 12 C 0.00 0.00 9.10 22.32 0.20 0.21 16 13 C -0.10 0.00 5.89 -19.79 -0.12 -0.12 16 14 C 0.12 -0.16 5.38 71.23 0.38 0.22 16 15 O -0.35 0.62 8.68 -51.41 -0.45 0.17 16 16 C 0.48 -0.04 7.48 71.23 0.53 0.50 16 17 O -0.53 -3.44 15.65 21.97 0.34 -3.10 16 18 C -0.10 0.57 4.26 -11.01 -0.05 0.52 16 19 H 0.16 -1.83 8.14 -2.39 -0.02 -1.85 16 20 C -0.13 0.67 7.46 31.12 0.23 0.90 16 21 C 0.05 -0.17 3.82 31.12 0.12 -0.05 16 22 H 0.12 -0.68 7.46 -2.39 -0.02 -0.70 16 23 O -0.38 0.39 10.65 -148.98 -1.59 -1.19 16 24 C 0.40 -1.61 6.23 113.37 0.71 -0.90 16 25 F -0.22 0.06 16.81 44.97 0.76 0.82 16 26 F -0.22 0.12 17.15 44.97 0.77 0.89 16 27 C -0.12 0.40 7.24 31.12 0.23 0.62 16 28 C 0.43 4.60 6.98 25.67 0.18 4.77 16 29 O -0.48 -8.24 16.93 -5.04 -0.09 -8.32 16 30 H 0.40 -3.10 8.74 -74.06 -0.65 -3.74 16 31 H 0.08 0.10 7.96 -2.39 -0.02 0.08 16 32 H -0.26 0.93 6.91 99.48 0.69 1.61 16 33 H -0.27 0.87 7.11 99.48 0.71 1.58 16 34 H 0.22 -1.14 4.64 -2.91 -0.01 -1.15 16 35 H 0.15 0.92 7.81 -2.91 -0.02 0.90 16 36 H 0.18 -0.79 6.96 -2.91 -0.02 -0.81 16 37 H 0.10 -0.18 8.13 -2.38 -0.02 -0.20 16 38 H 0.10 -0.17 8.13 -2.39 -0.02 -0.19 16 39 H 0.11 -0.86 8.14 -2.39 -0.02 -0.88 16 40 H 0.09 -0.24 8.09 -2.39 -0.02 -0.26 16 41 H 0.20 -2.41 8.14 -2.39 -0.02 -2.43 16 42 H 0.09 0.10 7.44 -2.39 -0.02 0.08 16 43 H 0.10 -0.61 8.14 -2.39 -0.02 -0.63 16 Total: 0.00 -25.42 403.46 3.23 -22.19 By element: Atomic # 1 Polarization: -9.10 SS G_CDS: 0.50 Total: -8.60 kcal Atomic # 6 Polarization: 1.30 SS G_CDS: 3.54 Total: 4.84 kcal Atomic # 8 Polarization: -12.67 SS G_CDS: -3.71 Total: -16.39 kcal Atomic # 9 Polarization: 0.18 SS G_CDS: 1.53 Total: 1.70 kcal Atomic # 14 Polarization: -5.11 SS G_CDS: 2.06 Total: -3.05 kcal Atomic # 35 Polarization: -0.02 SS G_CDS: -0.69 Total: -0.71 kcal Total: -25.42 3.23 -22.19 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_1458_13600068_484008.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -218.633 kcal (2) G-P(sol) polarization free energy of solvation -25.422 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -244.055 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.229 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.194 kcal (6) G-S(sol) free energy of system = (1) + (5) -240.826 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds