Wall clock time and date at job start Tue Mar 9 2021 12:51:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86294 * 109.47288 * 2 1 4 4 C 1.50696 * 109.47330 * 120.00422 * 2 1 3 5 5 C 1.34540 * 120.20591 * 249.97546 * 4 2 1 6 6 O 1.33714 * 122.85226 * 180.02562 * 5 4 2 7 7 C 1.34881 * 122.41033 * 359.94826 * 6 5 4 8 8 C 1.40417 * 119.68146 * 0.05209 * 7 6 5 9 9 C 1.39392 * 120.23926 * 179.97438 * 8 7 6 10 10 C 1.37844 * 119.52576 * 359.97438 * 9 8 7 11 11 Br 1.89095 * 119.86315 * 180.02562 * 10 9 8 12 12 C 1.38842 * 120.27570 * 359.79160 * 10 9 8 13 13 C 1.37827 * 120.70176 * 0.44980 * 12 10 9 14 14 C 1.50699 * 120.04153 * 179.80524 * 13 12 10 15 15 O 1.45200 * 109.46704 * 359.72051 * 14 13 12 16 16 C 1.34238 * 116.99699 * 179.97438 * 15 14 13 17 17 O 1.20823 * 120.00154 * 0.02562 * 16 15 14 18 18 C 1.50695 * 119.99758 * 180.02562 * 16 15 14 19 19 C 1.53896 * 113.58640 * 179.97438 * 18 16 15 20 20 C 1.53255 * 86.88077 * 89.68474 * 19 18 16 21 21 C 1.52594 * 128.57898 * 245.01071 * 20 19 18 22 22 C 1.52463 * 128.58200 * 165.11323 * 20 19 18 23 23 F 1.39905 * 117.51361 * 225.04697 * 22 20 19 24 24 F 1.39897 * 117.51358 * 10.11040 * 22 20 19 25 25 C 1.53258 * 87.69710 * 25.08514 * 20 19 18 26 26 C 1.42008 * 120.20444 * 69.99473 * 4 2 1 27 27 O 1.21916 * 121.40508 * 359.95985 * 26 4 2 28 28 H 0.96705 * 113.99192 * 299.99951 * 1 2 3 29 29 H 1.09012 * 109.46897 * 240.00200 * 2 1 3 30 30 H 1.48500 * 110.00297 * 299.99983 * 3 2 1 31 31 H 1.48501 * 110.00126 * 61.32471 * 3 2 1 32 32 H 1.07995 * 118.57031 * 0.02562 * 5 4 2 33 33 H 1.08000 * 120.23429 * 180.02562 * 9 8 7 34 34 H 1.07996 * 119.65066 * 180.25157 * 12 10 9 35 35 H 1.08998 * 109.47120 * 239.72561 * 14 13 12 36 36 H 1.08995 * 109.47063 * 119.72214 * 14 13 12 37 37 H 1.09002 * 112.83876 * 48.88105 * 18 16 15 38 38 H 1.08990 * 113.64570 * 335.18347 * 19 18 16 39 39 H 1.08998 * 113.64094 * 204.17850 * 19 18 16 40 40 H 1.09004 * 117.53725 * 134.99153 * 21 20 19 41 41 H 1.08995 * 117.50703 * 349.85937 * 21 20 19 42 42 H 1.09000 * 113.64702 * 89.41503 * 25 20 19 43 43 H 1.08999 * 113.64074 * 220.41969 * 25 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 2.5324 -0.0172 2.2143 6 8 2.9981 -0.5932 3.3276 7 6 2.8995 -1.9198 3.5507 8 6 2.2898 -2.7430 2.5904 9 6 2.1822 -4.1155 2.8088 10 6 2.6790 -4.6590 3.9740 11 35 2.5387 -6.5197 4.2798 12 6 3.2864 -3.8465 4.9220 13 6 3.3940 -2.4875 4.7190 14 6 4.0522 -1.6189 5.7599 15 8 4.4799 -2.4421 6.8769 16 6 5.0894 -1.8168 7.8964 17 8 5.2594 -0.6213 7.8570 18 6 5.5616 -2.6060 9.0902 19 6 6.2394 -1.7436 10.1696 20 6 4.8468 -1.5678 10.7848 21 6 4.0230 -0.2911 10.9256 22 6 4.4782 -1.0548 12.1724 23 9 3.5064 -1.7640 12.8865 24 9 5.4976 -0.4852 12.9427 25 6 4.4537 -2.8913 10.1195 26 6 1.7737 -2.1160 1.3582 27 8 1.2339 -2.7765 0.4872 28 1 -0.3932 0.4417 0.7651 29 1 1.7924 -0.5139 -0.8901 30 1 1.5616 2.4679 -1.2085 31 1 1.5881 2.4585 1.2243 32 1 2.6436 1.0509 2.1001 33 1 1.7136 -4.7486 2.0699 34 1 3.6758 -4.2835 5.8296 35 1 3.3415 -0.8709 6.1111 36 1 4.9177 -1.1210 5.3230 37 1 6.1374 -3.4890 8.8127 38 1 6.6673 -0.8181 9.7846 39 1 6.9303 -2.2997 10.8033 40 1 2.9665 -0.3415 10.6621 41 1 4.5184 0.6545 10.7056 42 1 4.6475 -3.7667 10.7392 43 1 3.4500 -2.8856 9.6943 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_1458_13948870_484008.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:51:26 Heat of formation + Delta-G solvation = -144.008046 kcal Electronic energy + Delta-G solvation = -36185.021513 eV Core-core repulsion = 30655.408481 eV Total energy + Delta-G solvation = -5529.613031 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 457.015 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -49.66212 -48.36872 -43.33393 -42.05671 -40.21101 -40.14834 -39.52919 -38.02184 -37.48980 -34.66911 -34.32683 -33.65655 -33.11921 -30.71788 -28.61276 -27.48018 -26.92263 -26.36574 -25.57287 -24.43151 -23.56232 -22.53504 -22.03540 -20.74727 -20.04763 -19.52690 -19.03294 -18.74429 -18.66866 -17.99222 -17.81657 -17.65783 -17.41780 -17.30100 -16.99765 -16.74880 -16.45397 -16.25289 -16.04642 -15.67903 -15.53894 -15.29895 -15.13886 -15.06330 -14.82071 -14.71934 -14.54001 -14.52358 -14.33477 -14.02987 -13.96772 -13.81353 -13.42586 -13.23450 -12.95455 -12.84187 -12.75257 -12.52842 -12.24620 -11.85113 -11.81364 -11.79304 -11.58367 -11.51216 -11.33959 -11.29279 -10.70028 -10.67113 -10.55876 -10.40693 -9.57494 -4.98861 -0.83650 -0.68989 0.04788 0.35781 0.98139 1.09383 1.16981 1.35832 1.41661 1.47565 1.96843 2.00505 2.11062 2.28778 2.69133 2.87373 2.88975 3.10917 3.20420 3.30996 3.36630 3.37077 3.40246 3.58114 3.62769 3.67879 3.78797 3.87364 3.99111 4.12136 4.17058 4.28374 4.30445 4.32626 4.41781 4.52506 4.61320 4.62699 4.66593 4.67004 4.75099 4.78969 4.80222 4.85204 4.92863 5.04201 5.05360 5.32843 5.75840 6.33245 6.48320 6.65414 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.550 6.550 2 C -0.073 4.073 3 Si 0.785 3.215 4 C -0.334 4.334 5 C 0.172 3.828 6 O -0.201 6.201 7 C 0.166 3.834 8 C -0.226 4.226 9 C -0.010 4.010 10 C -0.121 4.121 11 Br -0.026 7.026 12 C -0.007 4.007 13 C -0.097 4.097 14 C 0.118 3.882 15 O -0.349 6.349 16 C 0.486 3.514 17 O -0.518 6.518 18 C -0.101 4.101 19 C -0.077 4.077 20 C -0.167 4.167 21 C -0.135 4.135 22 C 0.182 3.818 23 F -0.172 7.172 24 F -0.174 7.174 25 C -0.070 4.070 26 C 0.424 3.576 27 O -0.496 6.496 28 H 0.386 0.614 29 H 0.104 0.896 30 H -0.301 1.301 31 H -0.238 1.238 32 H 0.242 0.758 33 H 0.143 0.857 34 H 0.179 0.821 35 H 0.102 0.898 36 H 0.105 0.895 37 H 0.155 0.845 38 H 0.085 0.915 39 H 0.127 0.873 40 H 0.134 0.866 41 H 0.129 0.871 42 H 0.131 0.869 43 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.410 2.523 2.874 6.625 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.179 4.179 3 Si 0.685 3.315 4 C -0.337 4.337 5 C 0.106 3.894 6 O -0.103 6.103 7 C 0.120 3.880 8 C -0.229 4.229 9 C -0.030 4.030 10 C -0.200 4.200 11 Br 0.060 6.940 12 C -0.026 4.026 13 C -0.098 4.098 14 C 0.045 3.955 15 O -0.266 6.266 16 C 0.329 3.671 17 O -0.406 6.406 18 C -0.120 4.120 19 C -0.114 4.114 20 C -0.168 4.168 21 C -0.172 4.172 22 C 0.146 3.854 23 F -0.153 7.153 24 F -0.155 7.155 25 C -0.107 4.107 26 C 0.310 3.690 27 O -0.379 6.379 28 H 0.235 0.765 29 H 0.122 0.878 30 H -0.229 1.229 31 H -0.164 1.164 32 H 0.257 0.743 33 H 0.161 0.839 34 H 0.196 0.804 35 H 0.120 0.880 36 H 0.123 0.877 37 H 0.173 0.827 38 H 0.103 0.897 39 H 0.145 0.855 40 H 0.152 0.848 41 H 0.147 0.853 42 H 0.149 0.851 43 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 5.094 2.454 2.185 6.062 hybrid contribution -1.608 -0.005 0.071 1.609 sum 3.487 2.449 2.256 4.821 Atomic orbital electron populations 1.86664 1.18869 1.80493 1.49826 1.25238 0.83348 1.12867 0.96437 0.94451 0.89055 0.69095 0.78853 1.21873 1.13340 0.95944 1.02504 1.24504 0.85562 0.98986 0.80321 1.83169 1.68150 1.20480 1.38500 1.18877 0.95220 0.80595 0.93317 1.20726 1.08322 0.95344 0.98517 1.21113 0.93160 0.93336 0.95426 1.21868 1.07149 0.92878 0.98154 1.96850 1.97475 1.03478 1.96211 1.21253 0.92021 0.90886 0.98445 1.18855 1.03629 0.93994 0.93326 1.21580 1.00372 0.90637 0.82941 1.86390 1.69655 1.42269 1.28280 1.23371 0.73758 0.86804 0.83144 1.90705 1.53184 1.16988 1.79690 1.21955 1.00302 1.00700 0.89042 1.22609 0.93004 1.01226 0.94526 1.24140 1.01587 0.98665 0.92447 1.24274 1.03130 0.97055 0.92758 1.20321 0.83500 1.00096 0.81508 1.93002 1.62275 1.79071 1.80937 1.92996 1.59281 1.85043 1.78145 1.22586 0.99031 0.94701 0.94379 1.18784 0.76414 0.89255 0.84539 1.90753 1.37258 1.67688 1.42249 0.76508 0.87822 1.22897 1.16366 0.74270 0.83921 0.80419 0.88027 0.87723 0.82697 0.89651 0.85505 0.84822 0.85329 0.85142 0.88951 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -2.72 12.88 -148.98 -1.92 -4.64 16 2 C -0.07 0.00 2.46 71.23 0.17 0.17 16 3 Si 0.79 -6.02 30.06 68.60 2.06 -3.96 16 4 C -0.33 0.25 5.32 -19.78 -0.11 0.14 16 5 C 0.17 -1.42 9.99 66.97 0.67 -0.75 16 6 O -0.20 1.32 9.21 -2.71 -0.02 1.30 16 7 C 0.17 -0.41 6.74 22.98 0.15 -0.26 16 8 C -0.23 -0.64 5.89 -20.01 -0.12 -0.76 16 9 C -0.01 -0.03 9.40 22.45 0.21 0.18 16 10 C -0.12 0.03 6.22 22.32 0.14 0.17 16 11 Br -0.03 0.00 33.69 -20.37 -0.69 -0.69 16 12 C -0.01 0.03 9.10 22.32 0.20 0.23 16 13 C -0.10 0.45 5.89 -19.78 -0.12 0.33 16 14 C 0.12 -0.80 5.38 71.24 0.38 -0.42 16 15 O -0.35 2.26 8.68 -51.49 -0.45 1.81 16 16 C 0.49 -2.44 7.23 71.23 0.51 -1.93 16 17 O -0.52 -0.22 15.57 21.97 0.34 0.12 16 18 C -0.10 0.97 4.44 -10.94 -0.05 0.92 16 19 C -0.08 0.54 7.47 30.98 0.23 0.77 16 20 C -0.17 0.74 2.72 -52.32 -0.14 0.59 16 21 C -0.13 0.42 10.51 30.50 0.32 0.74 16 22 C 0.18 0.22 5.26 30.46 0.16 0.38 16 23 F -0.17 -0.77 17.60 44.97 0.79 0.02 16 24 F -0.17 -0.93 17.60 44.97 0.79 -0.14 16 25 C -0.07 0.65 7.68 30.98 0.24 0.88 16 26 C 0.42 2.90 6.98 25.67 0.18 3.08 16 27 O -0.50 -7.74 16.93 -5.04 -0.09 -7.82 16 28 H 0.39 -1.33 8.70 -74.05 -0.64 -1.97 16 29 H 0.10 0.32 7.96 -2.38 -0.02 0.31 16 30 H -0.30 -0.59 7.11 99.48 0.71 0.11 16 31 H -0.24 2.26 6.86 99.48 0.68 2.94 16 32 H 0.24 -3.95 4.61 -2.91 -0.01 -3.96 16 33 H 0.14 0.71 7.81 -2.91 -0.02 0.69 16 34 H 0.18 -1.32 6.96 -2.91 -0.02 -1.34 16 35 H 0.10 -0.78 8.13 -2.39 -0.02 -0.80 16 36 H 0.10 -0.83 8.13 -2.39 -0.02 -0.85 16 37 H 0.16 -2.30 8.14 -2.39 -0.02 -2.32 16 38 H 0.08 -0.35 7.42 -2.39 -0.02 -0.37 16 39 H 0.13 -1.26 8.14 -2.39 -0.02 -1.28 16 40 H 0.13 -0.76 8.14 -2.39 -0.02 -0.78 16 41 H 0.13 -0.45 8.14 -2.39 -0.02 -0.47 16 42 H 0.13 -1.55 8.14 -2.39 -0.02 -1.57 16 43 H 0.09 -0.89 8.09 -2.39 -0.02 -0.91 16 Total: 0.00 -26.44 403.38 4.37 -22.07 By element: Atomic # 1 Polarization: -13.05 SS G_CDS: 0.50 Total: -12.55 kcal Atomic # 6 Polarization: 1.44 SS G_CDS: 3.05 Total: 4.49 kcal Atomic # 8 Polarization: -7.10 SS G_CDS: -2.13 Total: -9.23 kcal Atomic # 9 Polarization: -1.71 SS G_CDS: 1.58 Total: -0.12 kcal Atomic # 14 Polarization: -6.02 SS G_CDS: 2.06 Total: -3.96 kcal Atomic # 35 Polarization: 0.00 SS G_CDS: -0.69 Total: -0.69 kcal Total: -26.44 4.37 -22.07 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_1458_13948870_484008.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -121.938 kcal (2) G-P(sol) polarization free energy of solvation -26.440 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -148.378 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.370 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.070 kcal (6) G-S(sol) free energy of system = (1) + (5) -144.008 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds