Wall clock time and date at job start Tue Mar 9 2021 12:52:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46493 * 1 3 3 N 1.28468 * 124.88467 * 2 1 4 4 C 1.31815 * 110.07338 * 179.97438 * 3 2 1 5 5 C 1.47709 * 126.51523 * 180.02562 * 4 3 2 6 6 O 1.21566 * 119.99773 * 179.97438 * 5 4 3 7 7 N 1.34772 * 120.00157 * 359.97438 * 5 4 3 8 8 C 1.46502 * 119.99813 * 180.02562 * 7 5 4 9 9 H 1.08997 * 112.85249 * 23.79402 * 8 7 5 10 10 C 1.53781 * 113.61525 * 154.99569 * 8 7 5 11 11 C 1.53789 * 87.08141 * 89.11299 * 10 8 7 12 12 H 1.09001 * 113.60976 * 270.88038 * 11 10 8 13 13 C 1.50701 * 113.61348 * 139.98540 * 11 10 8 14 14 C 1.38246 * 119.98591 * 299.71928 * 13 11 10 15 15 C 1.38221 * 120.00461 * 179.77004 * 14 13 11 16 16 C 1.38318 * 119.99162 * 0.51287 * 15 14 13 17 17 Br 1.89099 * 120.01198 * 179.76959 * 16 15 14 18 18 C 1.38331 * 119.98239 * 359.74120 * 16 15 14 19 19 C 1.38220 * 119.98690 * 0.02562 * 18 16 15 20 20 C 1.53771 * 87.07922 * 25.43109 * 11 10 8 21 21 C 1.41497 * 106.96383 * 359.77047 * 4 3 2 22 22 C 1.35040 * 124.88633 * 179.97438 * 2 1 3 23 23 C 1.50696 * 126.38445 * 0.02562 * 22 2 1 24 24 O 1.42903 * 109.47131 * 329.98982 * 23 22 2 25 25 Si 1.86305 * 109.47185 * 209.99523 * 23 22 2 26 26 H 1.09012 * 109.47242 * 270.02225 * 1 2 3 27 27 H 1.08999 * 109.47563 * 30.02055 * 1 2 3 28 28 H 1.09000 * 109.47403 * 150.03179 * 1 2 3 29 29 H 0.97001 * 120.00461 * 359.97438 * 7 5 4 30 30 H 1.09000 * 113.61667 * 203.65878 * 10 8 7 31 31 H 1.09002 * 113.61514 * 334.56788 * 10 8 7 32 32 H 1.07998 * 119.99347 * 0.02609 * 14 13 11 33 33 H 1.07998 * 120.00112 * 180.23538 * 15 14 13 34 34 H 1.07999 * 120.00716 * 180.02562 * 18 16 15 35 35 H 1.07997 * 119.99239 * 179.97438 * 19 18 16 36 36 H 1.08996 * 113.61727 * 220.01629 * 20 11 10 37 37 H 1.09007 * 113.61501 * 89.11658 * 20 11 10 38 38 H 1.07998 * 127.25021 * 180.25153 * 21 4 3 39 39 H 1.08999 * 109.47358 * 89.99342 * 23 22 2 40 40 H 0.96700 * 114.00311 * 300.00591 * 24 23 22 41 41 H 1.48499 * 109.99670 * 58.67633 * 25 23 22 42 42 H 1.48497 * 110.00233 * 179.97438 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 7 2.1997 1.0538 0.0000 4 6 3.4740 0.7169 0.0006 5 6 4.6272 1.6399 0.0013 6 8 5.7596 1.1977 0.0022 7 7 4.4240 2.9722 0.0009 8 6 5.5678 3.8876 0.0010 9 1 6.4727 3.4344 -0.4038 10 6 5.2511 5.2694 -0.5950 11 6 4.8388 5.6993 0.8229 12 1 3.7884 5.5135 1.0473 13 6 5.2772 7.0958 1.1817 14 6 6.6214 7.4186 1.1849 15 6 7.0236 8.7006 1.5093 16 6 6.0817 9.6576 1.8411 17 35 6.6317 11.4099 2.2913 18 6 4.7371 9.3327 1.8428 19 6 4.3354 8.0518 1.5135 20 6 5.7833 4.6038 1.3447 21 6 3.5272 -0.6971 0.0064 22 6 2.2373 -1.1077 0.0005 23 6 1.7534 -2.5349 0.0006 24 8 0.4953 -2.6113 0.6740 25 14 2.9944 -3.6113 0.8794 26 1 -0.3634 0.0004 1.0278 27 1 -0.3634 0.8898 -0.5141 28 1 -0.3634 -0.8903 -0.5133 29 1 3.5205 3.3251 -0.0002 30 1 6.1290 5.7938 -0.9723 31 1 4.4248 5.2593 -1.3058 32 1 7.3570 6.6701 0.9299 33 1 8.0735 8.9537 1.5082 34 1 4.0012 10.0798 2.1013 35 1 3.2857 7.7979 1.5153 36 1 5.3869 4.0564 2.1998 37 1 6.8069 4.9462 1.4977 38 1 4.4108 -1.3180 0.0121 39 1 1.6370 -2.8792 -1.0270 40 1 0.5241 -2.3196 1.5955 41 1 3.1858 -3.1327 2.2720 42 1 2.5285 -5.0213 0.8869 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_10390340_13259642.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:06 Heat of formation + Delta-G solvation = 75.921938 kcal Electronic energy + Delta-G solvation = -26753.742060 eV Core-core repulsion = 22749.493606 eV Total energy + Delta-G solvation = -4004.248455 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.052 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -43.84321 -41.55640 -40.26914 -38.80023 -38.15790 -34.83845 -34.31571 -33.07892 -32.50261 -32.03405 -30.38103 -28.58842 -26.87721 -26.70123 -25.94435 -24.39655 -23.75670 -22.36202 -22.20095 -21.08631 -20.14583 -19.20828 -18.10166 -17.63894 -17.47324 -17.15107 -16.96365 -16.47762 -16.18312 -16.05297 -15.73563 -15.70136 -15.33865 -15.10465 -14.85585 -14.62354 -14.48973 -14.26760 -14.07987 -13.71351 -13.44217 -13.41881 -13.40297 -12.91353 -12.68766 -12.41090 -12.28080 -12.06036 -12.00028 -11.87730 -11.42018 -11.32700 -11.28048 -11.20994 -11.07818 -10.30113 -10.03542 -9.98624 -9.97299 -9.51106 -4.88820 0.05365 0.32202 0.43238 0.65267 0.82218 1.22487 1.54211 1.67503 1.94214 2.08333 2.28746 2.56468 3.09470 3.30700 3.35044 3.44553 3.64933 3.70211 3.82938 3.95072 3.95310 4.00262 4.19304 4.29718 4.35862 4.36048 4.41505 4.44548 4.49157 4.62715 4.66284 4.70323 4.71324 4.78228 4.86315 4.89112 5.01926 5.04675 5.13695 5.23496 5.24092 5.26271 5.49594 5.63488 5.67783 5.83616 6.27600 6.37883 6.81354 7.11312 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.077 3.923 2 N -0.264 5.264 3 N -0.264 5.264 4 C -0.040 4.040 5 C 0.607 3.393 6 O -0.563 6.563 7 N -0.691 5.691 8 C 0.114 3.886 9 H 0.095 0.905 10 C -0.123 4.123 11 C -0.068 4.068 12 H 0.109 0.891 13 C -0.056 4.056 14 C -0.113 4.113 15 C -0.098 4.098 16 C -0.110 4.110 17 Br -0.063 7.063 18 C -0.099 4.099 19 C -0.114 4.114 20 C -0.141 4.141 21 C -0.187 4.187 22 C -0.013 4.013 23 C -0.044 4.044 24 O -0.538 6.538 25 Si 0.782 3.218 26 H 0.100 0.900 27 H 0.102 0.898 28 H 0.116 0.884 29 H 0.415 0.585 30 H 0.107 0.893 31 H 0.085 0.915 32 H 0.149 0.851 33 H 0.139 0.861 34 H 0.138 0.862 35 H 0.148 0.852 36 H 0.066 0.934 37 H 0.104 0.896 38 H 0.182 0.818 39 H 0.146 0.854 40 H 0.388 0.612 41 H -0.295 1.295 42 H -0.284 1.284 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.413 -2.109 -1.608 5.149 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 N -0.054 5.054 3 N -0.102 5.102 4 C -0.198 4.198 5 C 0.392 3.608 6 O -0.440 6.440 7 N -0.342 5.342 8 C 0.008 3.992 9 H 0.113 0.887 10 C -0.161 4.161 11 C -0.087 4.087 12 H 0.127 0.873 13 C -0.056 4.056 14 C -0.132 4.132 15 C -0.118 4.118 16 C -0.189 4.189 17 Br 0.022 6.978 18 C -0.119 4.119 19 C -0.133 4.133 20 C -0.179 4.179 21 C -0.214 4.214 22 C -0.138 4.138 23 C -0.154 4.154 24 O -0.345 6.345 25 Si 0.685 3.315 26 H 0.118 0.882 27 H 0.120 0.880 28 H 0.134 0.866 29 H 0.252 0.748 30 H 0.125 0.875 31 H 0.104 0.896 32 H 0.167 0.833 33 H 0.157 0.843 34 H 0.156 0.844 35 H 0.166 0.834 36 H 0.085 0.915 37 H 0.122 0.878 38 H 0.199 0.801 39 H 0.164 0.836 40 H 0.238 0.762 41 H -0.222 1.222 42 H -0.211 1.211 Dipole moment (debyes) X Y Z Total from point charges -4.306 -1.571 -1.353 4.779 hybrid contribution -0.852 -0.099 0.795 1.169 sum -5.158 -1.670 -0.558 5.450 Atomic orbital electron populations 1.22611 0.70754 1.06742 1.06018 1.45689 1.08979 1.01912 1.48776 1.73458 1.02696 1.14724 1.19329 1.21804 0.90873 0.94489 1.12682 1.17014 0.86359 0.82054 0.75338 1.90790 1.23791 1.77697 1.51723 1.45452 1.10611 1.04489 1.73608 1.21944 0.89745 0.89612 0.97863 0.88669 1.23384 1.03471 0.93435 0.95819 1.21628 1.00555 0.89589 0.96890 0.87273 1.19997 0.93287 0.95557 0.96766 1.21265 0.96273 0.95954 0.99701 1.21308 0.99682 0.92782 0.97985 1.21979 0.96578 0.92033 1.08344 1.96751 1.91257 1.17270 1.92480 1.21313 0.93953 0.97893 0.98710 1.21334 1.00872 0.92038 0.99056 1.23571 1.01069 0.96174 0.97134 1.21722 0.97445 0.93521 1.08739 1.22174 0.90996 0.92082 1.08597 1.24838 0.93377 0.92067 1.05135 1.86582 1.29308 1.88565 1.30051 0.93240 0.83949 0.74803 0.79508 0.88179 0.87953 0.86564 0.74845 0.87453 0.89642 0.83331 0.84307 0.84385 0.83419 0.91540 0.87754 0.80121 0.83644 0.76206 1.22156 1.21096 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.58 10.12 127.77 1.29 0.71 16 2 N -0.26 0.15 3.70 -355.93 -1.32 -1.17 16 3 N -0.26 -0.83 11.67 -48.18 -0.56 -1.40 16 4 C -0.04 -0.22 7.13 42.45 0.30 0.08 16 5 C 0.61 4.37 7.82 86.75 0.68 5.04 16 6 O -0.56 -7.59 16.52 -3.92 -0.06 -7.65 16 7 N -0.69 -0.73 5.26 -443.04 -2.33 -3.06 16 8 C 0.11 -0.11 4.32 45.52 0.20 0.08 16 9 H 0.10 0.22 7.46 -2.39 -0.02 0.20 16 10 C -0.12 0.63 7.29 31.12 0.23 0.86 16 11 C -0.07 0.33 3.86 -11.01 -0.04 0.28 16 12 H 0.11 -0.69 8.10 -2.39 -0.02 -0.71 16 13 C -0.06 0.12 5.29 -19.86 -0.11 0.02 16 14 C -0.11 0.19 8.62 22.27 0.19 0.39 16 15 C -0.10 -0.08 9.79 22.28 0.22 0.14 16 16 C -0.11 -0.30 6.22 22.31 0.14 -0.16 16 17 Br -0.06 -0.24 33.70 -20.37 -0.69 -0.92 16 18 C -0.10 -0.09 9.79 22.29 0.22 0.13 16 19 C -0.11 0.18 9.71 22.27 0.22 0.39 16 20 C -0.14 0.37 7.25 31.12 0.23 0.59 16 21 C -0.19 -0.46 9.35 22.41 0.21 -0.25 16 22 C -0.01 0.01 6.18 41.40 0.26 0.27 16 23 C -0.04 0.23 2.88 71.23 0.20 0.43 16 24 O -0.54 2.82 10.40 -148.98 -1.55 1.27 16 25 Si 0.78 -3.18 31.22 68.60 2.14 -1.04 16 26 H 0.10 -1.04 8.14 -2.38 -0.02 -1.05 16 27 H 0.10 -0.90 8.14 -2.39 -0.02 -0.92 16 28 H 0.12 -1.02 6.77 -2.39 -0.02 -1.04 16 29 H 0.41 -0.91 8.43 -92.71 -0.78 -1.69 16 30 H 0.11 -0.65 7.73 -2.39 -0.02 -0.67 16 31 H 0.08 -0.50 8.14 -2.39 -0.02 -0.52 16 32 H 0.15 -0.80 6.64 -2.91 -0.02 -0.82 16 33 H 0.14 -0.16 8.06 -2.91 -0.02 -0.18 16 34 H 0.14 -0.15 8.06 -2.91 -0.02 -0.17 16 35 H 0.15 -0.83 8.06 -2.91 -0.02 -0.85 16 36 H 0.07 -0.01 8.14 -2.39 -0.02 -0.03 16 37 H 0.10 -0.42 6.30 -2.38 -0.02 -0.43 16 38 H 0.18 -0.13 7.01 -2.91 -0.02 -0.15 16 39 H 0.15 -1.17 7.96 -2.39 -0.02 -1.19 16 40 H 0.39 -3.72 8.70 -74.06 -0.64 -4.36 16 41 H -0.29 -0.74 7.11 99.48 0.71 -0.03 16 42 H -0.28 -0.52 7.11 99.48 0.71 0.18 16 Total: 0.00 -19.17 374.15 -0.24 -19.41 By element: Atomic # 1 Polarization: -14.14 SS G_CDS: -0.31 Total: -14.44 kcal Atomic # 6 Polarization: 4.57 SS G_CDS: 4.43 Total: 9.00 kcal Atomic # 7 Polarization: -1.42 SS G_CDS: -4.21 Total: -5.63 kcal Atomic # 8 Polarization: -4.77 SS G_CDS: -1.61 Total: -6.39 kcal Atomic # 14 Polarization: -3.18 SS G_CDS: 2.14 Total: -1.04 kcal Atomic # 35 Polarization: -0.24 SS G_CDS: -0.69 Total: -0.92 kcal Total: -19.17 -0.24 -19.41 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_10390340_13259642.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 95.337 kcal (2) G-P(sol) polarization free energy of solvation -19.173 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 76.163 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.241 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.415 kcal (6) G-S(sol) free energy of system = (1) + (5) 75.922 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds