Wall clock time and date at job start Tue Mar 9 2021 12:56:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34776 * 1 3 3 O 1.21280 * 120.00064 * 2 1 4 4 C 1.50700 * 119.99707 * 179.97438 * 2 1 3 5 5 H 1.08998 * 112.90676 * 48.75472 * 4 2 1 6 6 C 1.53782 * 113.61150 * 180.02562 * 4 2 1 7 7 C 1.53785 * 87.08118 * 139.98477 * 6 4 2 8 8 H 1.09001 * 113.61836 * 89.19528 * 7 6 4 9 9 N 1.46496 * 113.61402 * 220.01943 * 7 6 4 10 10 C 1.34776 * 120.00152 * 203.46521 * 9 7 6 11 11 O 1.21594 * 119.99706 * 0.02562 * 10 9 7 12 12 C 1.47573 * 120.00283 * 179.97438 * 10 9 7 13 13 C 1.36493 * 120.01200 * 180.02562 * 12 10 9 14 14 N 1.35949 * 120.50699 * 179.97438 * 13 12 10 15 15 C 1.36997 * 132.41375 * 179.97438 * 14 13 12 16 16 C 1.50701 * 126.42700 * 0.04355 * 15 14 13 17 17 O 1.42897 * 109.47451 * 330.00232 * 16 15 14 18 18 Si 1.86299 * 109.47279 * 209.99875 * 16 15 14 19 19 C 1.35009 * 107.14460 * 180.02562 * 15 14 13 20 20 N 1.33586 * 108.65169 * 359.97438 * 19 15 14 21 21 C 1.32416 * 109.22346 * 359.77334 * 20 19 15 22 22 C 1.41251 * 132.11003 * 179.58818 * 21 20 19 23 23 Br 1.89100 * 120.25965 * 0.63723 * 22 21 20 24 24 C 1.35711 * 119.48457 * 180.36572 * 22 21 20 25 25 C 1.53780 * 87.17099 * 334.60779 * 7 6 4 26 26 H 0.97004 * 120.00457 * 179.97438 * 1 2 3 27 27 H 0.97001 * 119.99930 * 0.02562 * 1 2 3 28 28 H 1.08991 * 113.61701 * 25.43478 * 6 4 2 29 29 H 1.09004 * 113.69152 * 254.53842 * 6 4 2 30 30 H 0.97005 * 120.00313 * 23.46901 * 9 7 6 31 31 H 1.07998 * 119.74788 * 359.97438 * 13 12 10 32 32 H 1.09004 * 109.46722 * 90.00324 * 16 15 14 33 33 H 0.96702 * 114.00015 * 299.99900 * 17 16 15 34 34 H 1.48506 * 109.99886 * 58.68463 * 18 16 15 35 35 H 1.48503 * 110.00182 * 179.97438 * 18 16 15 36 36 H 1.07998 * 125.67291 * 179.97438 * 19 15 14 37 37 H 1.08005 * 120.23044 * 180.27184 * 24 22 21 38 38 H 1.09005 * 113.61469 * 139.93530 * 25 7 6 39 39 H 1.08995 * 113.61937 * 270.84392 * 25 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1012 -1.3051 0.0006 5 1 1.7400 -2.0038 -0.7540 6 6 3.6295 -1.1341 0.0011 7 6 3.6821 -2.3116 0.9890 8 1 3.7548 -3.2852 0.5044 9 7 4.6649 -2.1348 2.0609 10 6 5.1664 -3.2105 2.6994 11 8 4.8035 -4.3278 2.3855 12 6 6.1569 -3.0325 3.7788 13 6 6.6653 -4.1219 4.4253 14 7 7.5786 -3.9696 5.4207 15 6 8.2360 -4.8697 6.2172 16 6 8.0943 -6.3695 6.1784 17 8 6.7741 -6.7124 5.7523 18 14 8.3985 -7.0663 7.8792 19 6 9.0349 -4.1610 7.0433 20 7 8.8836 -2.8616 6.7730 21 6 8.0092 -2.7199 5.7888 22 6 7.4937 -1.5777 5.1369 23 35 8.0745 0.1501 5.6401 24 6 6.5825 -1.7303 4.1428 25 6 2.2490 -1.9328 1.3986 26 1 -0.4851 -0.8400 -0.0004 27 1 -0.4850 0.8401 -0.0004 28 1 3.9629 -0.1892 0.4299 29 1 4.0947 -1.3501 -0.9607 30 1 4.9547 -1.2435 2.3111 31 1 6.3396 -5.1123 4.1438 32 1 8.8209 -6.7851 5.4802 33 1 6.0747 -6.3746 6.3283 34 1 7.4346 -6.4834 8.8468 35 1 8.2611 -8.5448 7.8544 36 1 9.6877 -4.5757 7.7971 37 1 6.1838 -0.8655 3.6333 38 1 1.6000 -2.7931 1.5627 39 1 2.2043 -1.2066 2.2101 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_11684966_12335884.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:01 Heat of formation + Delta-G solvation = 18.009748 kcal Electronic energy + Delta-G solvation = -27814.876010 eV Core-core repulsion = 23579.545811 eV Total energy + Delta-G solvation = -4235.330200 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 395.031 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -44.27641 -41.72569 -40.73508 -38.83169 -38.36367 -38.00934 -35.46814 -34.78075 -34.44014 -32.51313 -31.80029 -30.28472 -27.59381 -26.89332 -26.75137 -25.38738 -24.09709 -22.71114 -22.33846 -21.76955 -20.59773 -19.57051 -18.77376 -18.45146 -18.26459 -17.87432 -17.71278 -17.50304 -16.84961 -16.40425 -16.28551 -16.19305 -15.91738 -15.87101 -15.54731 -15.28727 -14.94815 -14.68523 -14.41864 -14.10960 -13.61282 -13.52305 -13.40775 -13.35018 -13.02960 -12.76814 -12.46321 -12.24696 -12.15266 -11.71609 -11.56621 -11.40328 -11.36692 -11.27017 -11.06828 -10.94298 -10.66521 -10.27510 -10.02105 -9.10029 -4.93607 -0.92904 -0.40538 0.17301 0.95647 1.11405 1.39739 1.57924 1.67666 1.79696 1.90026 2.00747 2.19589 2.65700 2.79988 2.98585 3.13621 3.34087 3.37134 3.42688 3.43004 3.47790 3.70380 3.83841 3.88644 4.11747 4.25651 4.28984 4.37144 4.42452 4.47369 4.55491 4.66173 4.71893 4.89086 4.93801 4.98195 5.06480 5.31561 5.42957 5.55288 5.87558 6.18443 6.27100 6.46103 6.48702 6.92019 7.33357 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.840 5.840 2 C 0.523 3.477 3 O -0.593 6.593 4 C -0.130 4.130 5 H 0.146 0.854 6 C -0.123 4.123 7 C 0.123 3.877 8 H 0.120 0.880 9 N -0.699 5.699 10 C 0.581 3.419 11 O -0.562 6.562 12 C -0.170 4.170 13 C 0.159 3.841 14 N -0.359 5.359 15 C -0.088 4.088 16 C -0.053 4.053 17 O -0.547 6.547 18 Si 0.816 3.184 19 C 0.045 3.955 20 N -0.493 5.493 21 C 0.223 3.777 22 C -0.080 4.080 23 Br 0.005 6.995 24 C -0.028 4.028 25 C -0.128 4.128 26 H 0.418 0.582 27 H 0.404 0.596 28 H 0.092 0.908 29 H 0.091 0.909 30 H 0.414 0.586 31 H 0.193 0.807 32 H 0.139 0.861 33 H 0.386 0.614 34 H -0.290 1.290 35 H -0.289 1.289 36 H 0.229 0.771 37 H 0.181 0.819 38 H 0.095 0.905 39 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.746 -2.510 -0.737 3.793 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.402 5.402 2 C 0.309 3.691 3 O -0.474 6.474 4 C -0.152 4.152 5 H 0.164 0.836 6 C -0.162 4.162 7 C 0.019 3.981 8 H 0.138 0.862 9 N -0.350 5.350 10 C 0.368 3.632 11 O -0.441 6.441 12 C -0.178 4.178 13 C 0.032 3.968 14 N -0.032 5.032 15 C -0.199 4.199 16 C -0.160 4.160 17 O -0.354 6.354 18 Si 0.718 3.282 19 C -0.104 4.104 20 N -0.212 5.212 21 C -0.022 4.022 22 C -0.162 4.162 23 Br 0.090 6.910 24 C -0.054 4.054 25 C -0.167 4.167 26 H 0.249 0.751 27 H 0.235 0.765 28 H 0.110 0.890 29 H 0.110 0.890 30 H 0.252 0.748 31 H 0.209 0.791 32 H 0.157 0.843 33 H 0.236 0.764 34 H -0.217 1.217 35 H -0.216 1.216 36 H 0.245 0.755 37 H 0.198 0.802 38 H 0.114 0.886 39 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges -1.819 -2.256 -0.155 2.902 hybrid contribution -2.048 -0.138 -0.729 2.178 sum -3.867 -2.393 -0.884 4.633 Atomic orbital electron populations 1.43838 1.06593 1.13749 1.76056 1.20788 0.83319 0.91072 0.73943 1.90746 1.69375 1.35316 1.51946 1.22635 0.96347 0.94919 1.01298 0.83636 1.23241 0.93985 0.98370 1.00571 1.22609 0.87188 1.00586 0.87753 0.86228 1.45770 1.43599 1.09107 1.36478 1.17548 0.79986 0.84802 0.80882 1.90839 1.61592 1.25140 1.66554 1.19274 1.03893 0.92545 1.02051 1.22228 0.86807 1.02391 0.85350 1.42753 1.28059 1.08557 1.23859 1.22432 1.04185 0.94063 0.99228 1.25210 0.87289 0.87346 1.16182 1.86589 1.15492 1.78817 1.54493 0.93435 0.88952 0.76270 0.69588 1.23045 0.99681 0.87527 1.00187 1.70845 1.16808 1.20081 1.13425 1.20694 0.98531 0.85041 0.97902 1.20576 1.03295 0.90902 1.01422 1.96844 1.89678 1.12281 1.92202 1.21342 0.92954 0.97643 0.93426 1.23409 0.96986 1.01286 0.95023 0.75088 0.76477 0.88958 0.89049 0.74813 0.79056 0.84341 0.76424 1.21658 1.21604 0.75488 0.80164 0.88594 0.89513 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 5.87 8.87 -173.53 -1.54 4.33 16 2 C 0.52 -0.32 7.63 87.66 0.67 0.35 16 3 O -0.59 -5.64 16.74 -3.03 -0.05 -5.69 16 4 C -0.13 0.84 4.15 -10.95 -0.05 0.80 16 5 H 0.15 -1.66 8.14 -2.39 -0.02 -1.67 16 6 C -0.12 0.59 7.15 31.12 0.22 0.82 16 7 C 0.12 -0.59 4.21 45.52 0.19 -0.40 16 8 H 0.12 -0.39 7.50 -2.39 -0.02 -0.41 16 9 N -0.70 2.84 5.31 -443.16 -2.35 0.49 16 10 C 0.58 0.65 7.76 86.71 0.67 1.33 16 11 O -0.56 -4.36 15.89 -4.01 -0.06 -4.42 16 12 C -0.17 -0.05 5.84 -20.35 -0.12 -0.17 16 13 C 0.16 0.34 9.91 83.65 0.83 1.16 16 14 N -0.36 -1.25 2.93 -337.71 -0.99 -2.25 16 15 C -0.09 -0.04 6.24 41.01 0.26 0.22 16 16 C -0.05 0.18 3.06 71.24 0.22 0.40 16 17 O -0.55 0.30 10.90 -148.98 -1.62 -1.32 16 18 Si 0.82 -4.64 31.18 68.60 2.14 -2.50 16 19 C 0.04 0.03 10.44 83.68 0.87 0.90 16 20 N -0.49 -3.62 11.30 -194.10 -2.19 -5.82 16 21 C 0.22 1.41 7.59 134.19 1.02 2.43 16 22 C -0.08 -0.27 6.24 22.42 0.14 -0.13 16 23 Br 0.00 0.02 33.72 -20.37 -0.69 -0.67 16 24 C -0.03 0.04 9.26 22.55 0.21 0.25 16 25 C -0.13 0.85 7.44 31.18 0.23 1.08 16 26 H 0.42 -5.51 8.83 -92.71 -0.82 -6.32 16 27 H 0.40 -2.83 8.93 -92.71 -0.83 -3.66 16 28 H 0.09 -0.19 7.40 -2.39 -0.02 -0.21 16 29 H 0.09 -0.53 8.14 -2.39 -0.02 -0.55 16 30 H 0.41 -3.36 6.75 -92.70 -0.63 -3.99 16 31 H 0.19 0.41 6.19 -2.91 -0.02 0.40 16 32 H 0.14 -0.79 7.96 -2.38 -0.02 -0.81 16 33 H 0.39 -1.85 8.70 -74.06 -0.64 -2.50 16 34 H -0.29 -0.08 7.11 99.48 0.71 0.63 16 35 H -0.29 -0.33 7.11 99.48 0.71 0.38 16 36 H 0.23 -1.83 6.90 -2.91 -0.02 -1.85 16 37 H 0.18 -1.42 6.44 -2.91 -0.02 -1.44 16 38 H 0.10 -0.79 8.14 -2.38 -0.02 -0.81 16 39 H 0.09 -0.45 8.10 -2.39 -0.02 -0.46 16 Total: 0.00 -28.40 356.12 -3.69 -32.09 By element: Atomic # 1 Polarization: -21.58 SS G_CDS: -1.69 Total: -23.27 kcal Atomic # 6 Polarization: 3.66 SS G_CDS: 5.37 Total: 9.03 kcal Atomic # 7 Polarization: 3.83 SS G_CDS: -7.08 Total: -3.25 kcal Atomic # 8 Polarization: -9.69 SS G_CDS: -1.74 Total: -11.43 kcal Atomic # 14 Polarization: -4.64 SS G_CDS: 2.14 Total: -2.50 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -0.69 Total: -0.67 kcal Total: -28.40 -3.69 -32.09 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11684966_12335884.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 50.102 kcal (2) G-P(sol) polarization free energy of solvation -28.403 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 21.698 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.689 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.092 kcal (6) G-S(sol) free energy of system = (1) + (5) 18.010 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds